FFCP PHASE1:Hg19::chr1:210111534..210111541,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=255928|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23143|TSSclassifier=S|UniProt=F5H1A2,F5H426,A1L3Y1,Q8NB59|association_with_transcript=0bp_to_ENST00000399639,ENST00000422431,ENST00000534859,ENST00000537238,NM_001146261,NM_001146262,NM_001146264,NM_153262,NR_027458,NR_027459,uc001hhs.3,uc001hht.3,uc001hhu.3,uc009xcv.2,uc010psn.1,uc010pso.1_5end|description=CAGE_peak_6_at_SYT14_5end|id=chr1:210111534..210111541,+|ontology_enrichment_celltype=CL:0000133!8.91e-12!59;CL:0000221!2.78e-10!71;CL:0000147!4.70e-09!14;CL:0000333!3.29e-08!41;CL:0000710!5.78e-08!20;CL:0000148!1.65e-07!10;CL:0000541!1.65e-07!10;CL:0000075!7.66e-07!27|ontology_enrichment_celltype_v019=CL:0002566;1.54e-15;1!CL:0000313;1.54e-15;1!CL:0000148;2.16e-13;10!CL:0000147;9.80e-10;14!CL:0000047;2.00e-08;2!CL:0000159;2.00e-08;2!CL:0000710;5.67e-07;20|ontology_enrichment_celltype_v019_2=CL:0000313,1.16e-15,1;CL:0002566,3.17e-15,1;CL:0000148,1.82e-13,10;CL:0000541,1.82e-13,10;CL:0000333,1.14e-11,41;CL:0000133,6.11e-11,59;CL:0000147,8.70e-10,14;CL:0000221,6.32e-09,72;CL:0000159,1.73e-08,2;CL:0000710,5.23e-07,20|ontology_enrichment_development_v019=CL:0000133;9.46e-07;59|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;1.54e-15;1|ontology_enrichment_disease_v019_2=DOID:2152,1.16e-15,1|ontology_enrichment_uberon=UBERON:0000073!1.21e-25!94;UBERON:0001016!1.21e-25!94;UBERON:0005743!9.79e-22!86;UBERON:0001017!2.94e-21!82;UBERON:0001049!1.88e-20!57;UBERON:0005068!1.88e-20!57;UBERON:0006241!1.88e-20!57;UBERON:0007135!1.88e-20!57;UBERON:0000955!9.28e-19!69;UBERON:0006238!9.28e-19!69;UBERON:0002616!2.75e-18!59;UBERON:0002346!2.13e-17!90;UBERON:0002780!4.26e-17!41;UBERON:0001890!4.26e-17!41;UBERON:0006240!4.26e-17!41;UBERON:0003075!1.31e-16!86;UBERON:0007284!1.31e-16!86;UBERON:0003080!1.79e-16!42;UBERON:0003056!1.38e-15!61;UBERON:0000924!4.51e-15!173;UBERON:0006601!4.51e-15!173;UBERON:0004121!2.54e-14!169;UBERON:0001893!5.35e-14!34;UBERON:0002020!6.82e-14!34;UBERON:0003528!6.82e-14!34;UBERON:0002619!8.88e-14!22;UBERON:0002791!3.27e-13!33;UBERON:0001869!7.21e-13!32;UBERON:0000033!2.78e-12!123;UBERON:0001950!8.90e-12!20;UBERON:0000956!1.60e-11!25;UBERON:0000203!1.60e-11!25;UBERON:0000153!4.90e-11!129;UBERON:0007811!4.90e-11!129;UBERON:0000119!1.80e-07!312;UBERON:0000483!5.21e-07!309;UBERON:0000349!7.86e-07!5|ontology_enrichment_uberon_v019=UBERON:0004911;1.54e-15;1!UBERON:0000007;2.00e-08;2!UBERON:0004909;2.00e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.16e-15,1;UBERON:0000007,1.50e-08,2;UBERON:0004909,1.73e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0.653847612453835,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0.969876340912871,0,0.10075209822764,0.169560592310488,0,0,0,0.487894824518382,0,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,1.07946420296687,0.381988425558278,0,1.71072446022705,0.616964956219941,1.50171528921959,0.285826432630578,0.336393253036082,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0.539107359730903,0,0,0.316654886678627,1.13733384070897,0,0,0,0.541892875087706,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99107399156925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0,0,0,1.43176155503017,0,0.311039587661807,0,0,0,0,0,0,0,0.09276809816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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=255928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23143 | |||
|TSSclassifier=S | |||
|UniProt=F5H1A2,F5H426,A1L3Y1,Q8NB59 | |||
|association_with_transcript=0bp_to_ENST00000399639,ENST00000422431,ENST00000534859,ENST00000537238,NM_001146261,NM_001146262,NM_001146264,NM_153262,NR_027458,NR_027459,uc001hhs.3,uc001hht.3,uc001hhu.3,uc009xcv.2,uc010psn.1,uc010pso.1_5end | |||
|description=CAGE_peak_6_at_SYT14_5end | |||
|id=chr1:210111534..210111541,+ | |||
|ontology_enrichment_celltype=CL:0000133!8.91e-12!59;CL:0000221!2.78e-10!71;CL:0000147!4.70e-09!14;CL:0000333!3.29e-08!41;CL:0000710!5.78e-08!20;CL:0000148!1.65e-07!10;CL:0000541!1.65e-07!10;CL:0000075!7.66e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002566;1.54e-15;1!CL:0000313;1.54e-15;1!CL:0000148;2.16e-13;10!CL:0000147;9.80e-10;14!CL:0000047;2.00e-08;2!CL:0000159;2.00e-08;2!CL:0000710;5.67e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.16e-15,1;CL:0002566,3.17e-15,1;CL:0000148,1.82e-13,10;CL:0000541,1.82e-13,10;CL:0000333,1.14e-11,41;CL:0000133,6.11e-11,59;CL:0000147,8.70e-10,14;CL:0000221,6.32e-09,72;CL:0000159,1.73e-08,2;CL:0000710,5.23e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000133;9.46e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.54e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.16e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.21e-25!94;UBERON:0001016!1.21e-25!94;UBERON:0005743!9.79e-22!86;UBERON:0001017!2.94e-21!82;UBERON:0001049!1.88e-20!57;UBERON:0005068!1.88e-20!57;UBERON:0006241!1.88e-20!57;UBERON:0007135!1.88e-20!57;UBERON:0000955!9.28e-19!69;UBERON:0006238!9.28e-19!69;UBERON:0002616!2.75e-18!59;UBERON:0002346!2.13e-17!90;UBERON:0002780!4.26e-17!41;UBERON:0001890!4.26e-17!41;UBERON:0006240!4.26e-17!41;UBERON:0003075!1.31e-16!86;UBERON:0007284!1.31e-16!86;UBERON:0003080!1.79e-16!42;UBERON:0003056!1.38e-15!61;UBERON:0000924!4.51e-15!173;UBERON:0006601!4.51e-15!173;UBERON:0004121!2.54e-14!169;UBERON:0001893!5.35e-14!34;UBERON:0002020!6.82e-14!34;UBERON:0003528!6.82e-14!34;UBERON:0002619!8.88e-14!22;UBERON:0002791!3.27e-13!33;UBERON:0001869!7.21e-13!32;UBERON:0000033!2.78e-12!123;UBERON:0001950!8.90e-12!20;UBERON:0000956!1.60e-11!25;UBERON:0000203!1.60e-11!25;UBERON:0000153!4.90e-11!129;UBERON:0007811!4.90e-11!129;UBERON:0000119!1.80e-07!312;UBERON:0000483!5.21e-07!309;UBERON:0000349!7.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.54e-15;1!UBERON:0000007;2.00e-08;2!UBERON:0004909;2.00e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.16e-15,1;UBERON:0000007,1.50e-08,2;UBERON:0004909,1.73e-08,2 | |||
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|short_description=p6@SYT14 | |||
}} |
Revision as of 03:26, 12 September 2013
Short description: | p6@SYT14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SYT14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399639, ENST00000422431, ENST00000534859, ENST00000537238, NM_001146261, NM_001146262, NM_001146264, NM_153262, NR_027458, NR_027459, uc001hhs.3, uc001hht.3, uc001hhu.3, uc009xcv.2, uc010psn.1, uc010pso.1_5end |
EntrezGene: | SYT14 |
HGNC: | 23143 |
UniProt: | F5H1A2F5H426A1L3Y1Q8NB59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.16e-15 | 1 |
dark melanocyte | 3.17e-15 | 1 |
melanocyte | 1.82e-13 | 10 |
melanoblast | 1.82e-13 | 10 |
migratory neural crest cell | 1.14e-11 | 41 |
neurectodermal cell | 6.11e-11 | 59 |
pigment cell | 8.70e-10 | 14 |
ectodermal cell | 6.32e-09 | 72 |
seromucus secreting cell | 1.73e-08 | 2 |
neurecto-epithelial cell | 5.23e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.16e-15 | 1 |
pituitary gland | 1.50e-08 | 2 |
epithelium of gonad | 1.73e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.16e-15 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.