FFCP PHASE1:Hg19::chr1:203452420..203452442,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5549|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9357|TSSclassifier=S|UniProt=Q6FHG6,Q6FG38|association_with_transcript=107bp_to_CR541787,CR542270_5end|coexpression_cluster_id=C930|description=CAGE_peak_6_at_PRELP_5end|id=chr1:203452420..203452442,+|ontology_enrichment_celltype=CL:0000136!4.57e-12!15;CL:0000153!6.44e-08!9;CL:0000447!6.44e-08!9|ontology_enrichment_celltype_v019=CL:0000136;2.87e-18;13!CL:0000153;2.00e-12;9!CL:0000447;2.00e-12;9!CL:0002615;6.09e-11;3!CL:0000138;8.96e-09;6!CL:0002617;3.22e-07;2!CL:0000327;3.85e-07;15|ontology_enrichment_celltype_v019_2=CL:0000136,1.64e-15,15;CL:0000153,1.66e-12,9;CL:0000447,1.66e-12,9;CL:0002615,6.21e-11,3;CL:0000058,7.80e-09,6;CL:0000138,7.80e-09,6;CL:0002617,2.48e-07,2;CL:0000327,3.46e-07,15|ontology_enrichment_development_v019=UBERON:0005062;4.17e-08;4!UBERON:0007284;4.17e-08;4!UBERON:0006603;1.63e-07;65!UBERON:0006965;3.42e-07;2!UBERON:0007297;6.02e-07;2!UBERON:0004872;6.84e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;4.72e-07;2|ontology_enrichment_disease_v019_2=DOID:114,4.88e-07,2|ontology_enrichment_uberon=UBERON:0007023!2.70e-58!115;UBERON:0001049!1.43e-12!57;UBERON:0005068!1.43e-12!57;UBERON:0006241!1.43e-12!57;UBERON:0007135!1.43e-12!57;UBERON:0003075!5.63e-11!86;UBERON:0007284!5.63e-11!86;UBERON:0003080!2.19e-10!42;UBERON:0002346!4.93e-10!90;UBERON:0002616!6.26e-10!59;UBERON:0002780!1.12e-09!41;UBERON:0001890!1.12e-09!41;UBERON:0006240!1.12e-09!41;UBERON:0004457!5.07e-09!12;UBERON:0000042!5.07e-09!12;UBERON:0002020!2.67e-08!34;UBERON:0003528!2.67e-08!34;UBERON:0001893!3.08e-08!34;UBERON:0001017!5.19e-08!82;UBERON:0005743!5.30e-08!86;UBERON:0000955!7.44e-08!69;UBERON:0006238!7.44e-08!69;UBERON:0002791!1.03e-07!33;UBERON:0000073!4.19e-07!94;UBERON:0001016!4.19e-07!94;UBERON:0001869!4.30e-07!32|ontology_enrichment_uberon_v019=UBERON:0004457;1.59e-12;9!UBERON:0000042;1.59e-12;9!UBERON:0003978;1.07e-10;3!UBERON:0000946;1.07e-10;3!UBERON:0006947;2.21e-09;3!UBERON:0004054;2.21e-09;3!UBERON:0003688;7.11e-09;6!UBERON:0002358;7.11e-09;6!UBERON:0003684;7.11e-09;6!UBERON:0001178;7.11e-09;6!UBERON:0002133;1.23e-07;2!UBERON:0005406;1.64e-07;2!UBERON:0002081;2.11e-07;2!UBERON:0005904;3.90e-07;4!UBERON:0007023;7.03e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.05e-23,114;UBERON:0004457,2.06e-15,12;UBERON:0000042,2.06e-15,12;UBERON:0003978,1.04e-10,3;UBERON:0009751,1.04e-10,3;UBERON:0000946,1.04e-10,3;UBERON:0002523,1.04e-10,3;UBERON:0005983,1.04e-10,3;UBERON:0002165,1.04e-10,3;UBERON:0002062,1.04e-10,3;UBERON:0007280,1.04e-10,3;UBERON:0006947,1.91e-09,3;UBERON:0004054,1.91e-09,3;UBERON:0003688,6.91e-09,6;UBERON:0002358,6.91e-09,6;UBERON:0003684,6.91e-09,6;UBERON:0001178,6.91e-09,6;UBERON:0002133,1.20e-07,2;UBERON:0004458,1.26e-07,49;UBERON:0005406,1.70e-07,2;UBERON:0002081,2.05e-07,2;UBERON:0010227,2.05e-07,2;UBERON:0005904,3.50e-07,4|phase1_expression=2.90685406832891,3.8538094300377,7.3296290129905,6.00439790118782,10.7270662662549,3.48935409640147,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,4.63508860674636,4.7717156823066,21.411934293316,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,1.97328599257748,1.49490172172997,0,0,0,1.03056216018252,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,1.71495859578347,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,1.73675465473144,0.153461973288062,0.280660094433074,1.40953064181271,0,0.482561763430822,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,5.9110137883346,3.62224382255892,0,0,0,0,0,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,10.1616474008046,0.828851746593443,0,0,0,1.24415835064723,0,0,0,4.04437963111428,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0,2.61630878912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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9357 | |||
|TSSclassifier=S | |||
|UniProt=Q6FHG6,Q6FG38 | |||
|association_with_transcript=107bp_to_CR541787,CR542270_5end | |||
|coexpression_cluster_id=C930 | |||
|description=CAGE_peak_6_at_PRELP_5end | |||
|id=chr1:203452420..203452442,+ | |||
|ontology_enrichment_celltype=CL:0000136!4.57e-12!15;CL:0000153!6.44e-08!9;CL:0000447!6.44e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.87e-18;13!CL:0000153;2.00e-12;9!CL:0000447;2.00e-12;9!CL:0002615;6.09e-11;3!CL:0000138;8.96e-09;6!CL:0002617;3.22e-07;2!CL:0000327;3.85e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.64e-15,15;CL:0000153,1.66e-12,9;CL:0000447,1.66e-12,9;CL:0002615,6.21e-11,3;CL:0000058,7.80e-09,6;CL:0000138,7.80e-09,6;CL:0002617,2.48e-07,2;CL:0000327,3.46e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.17e-08;4!UBERON:0007284;4.17e-08;4!UBERON:0006603;1.63e-07;65!UBERON:0006965;3.42e-07;2!UBERON:0007297;6.02e-07;2!UBERON:0004872;6.84e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.72e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.88e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-58!115;UBERON:0001049!1.43e-12!57;UBERON:0005068!1.43e-12!57;UBERON:0006241!1.43e-12!57;UBERON:0007135!1.43e-12!57;UBERON:0003075!5.63e-11!86;UBERON:0007284!5.63e-11!86;UBERON:0003080!2.19e-10!42;UBERON:0002346!4.93e-10!90;UBERON:0002616!6.26e-10!59;UBERON:0002780!1.12e-09!41;UBERON:0001890!1.12e-09!41;UBERON:0006240!1.12e-09!41;UBERON:0004457!5.07e-09!12;UBERON:0000042!5.07e-09!12;UBERON:0002020!2.67e-08!34;UBERON:0003528!2.67e-08!34;UBERON:0001893!3.08e-08!34;UBERON:0001017!5.19e-08!82;UBERON:0005743!5.30e-08!86;UBERON:0000955!7.44e-08!69;UBERON:0006238!7.44e-08!69;UBERON:0002791!1.03e-07!33;UBERON:0000073!4.19e-07!94;UBERON:0001016!4.19e-07!94;UBERON:0001869!4.30e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.59e-12;9!UBERON:0000042;1.59e-12;9!UBERON:0003978;1.07e-10;3!UBERON:0000946;1.07e-10;3!UBERON:0006947;2.21e-09;3!UBERON:0004054;2.21e-09;3!UBERON:0003688;7.11e-09;6!UBERON:0002358;7.11e-09;6!UBERON:0003684;7.11e-09;6!UBERON:0001178;7.11e-09;6!UBERON:0002133;1.23e-07;2!UBERON:0005406;1.64e-07;2!UBERON:0002081;2.11e-07;2!UBERON:0005904;3.90e-07;4!UBERON:0007023;7.03e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.05e-23,114;UBERON:0004457,2.06e-15,12;UBERON:0000042,2.06e-15,12;UBERON:0003978,1.04e-10,3;UBERON:0009751,1.04e-10,3;UBERON:0000946,1.04e-10,3;UBERON:0002523,1.04e-10,3;UBERON:0005983,1.04e-10,3;UBERON:0002165,1.04e-10,3;UBERON:0002062,1.04e-10,3;UBERON:0007280,1.04e-10,3;UBERON:0006947,1.91e-09,3;UBERON:0004054,1.91e-09,3;UBERON:0003688,6.91e-09,6;UBERON:0002358,6.91e-09,6;UBERON:0003684,6.91e-09,6;UBERON:0001178,6.91e-09,6;UBERON:0002133,1.20e-07,2;UBERON:0004458,1.26e-07,49;UBERON:0005406,1.70e-07,2;UBERON:0002081,2.05e-07,2;UBERON:0010227,2.05e-07,2;UBERON:0005904,3.50e-07,4 | |||
|phase1_expression=2.90685406832891,3.8538094300377,7.3296290129905,6.00439790118782,10.7270662662549,3.48935409640147,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,4.63508860674636,4.7717156823066,21.411934293316,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,1.97328599257748,1.49490172172997,0,0,0,1.03056216018252,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,1.71495859578347,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,1.73675465473144,0.153461973288062,0.280660094433074,1.40953064181271,0,0.482561763430822,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,5.9110137883346,3.62224382255892,0,0,0,0,0,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,10.1616474008046,0.828851746593443,0,0,0,1.24415835064723,0,0,0,4.04437963111428,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0,2.6163087891291,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.06149077404007,3.66618086960175,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,1.97292201424695,0,0,0.884612114798832,0,0,0,0,0,0,0,0.138674673013139,0,0,0,3.31980669659857,0,0,0,0,2.61870344518732,0,3.38971111170799,0,0,0.0633107959558787,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,8.37847203816763,6.41649187232714,3.58936512288407,1.39775300349294,4.29226048136571,0.669514372325618,0.268733889946905,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.104909176269996,0,0,0,3.57347663186684,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0.732761168390412,0,0.129282956361551,0.26446520348538,0,0,2.0289608387862,0.628817220398664,2.48543433208317,0,0,0,0,1.08803560673895,0,0.919036730290385,3.27872630709804,0,0,0,0.3755727921195,0,0.665574309221114,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0,0.0691572524642179,1.13032951942296,1.42769420259154,0,0,0,0,0,0,1.19349733269765,1.88025820873143,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0.548257766857182,6.94695649745012,0,0,0.535701835878287,0,0.606965604236632,0.455324382702595,0.177404740325278,0,0,0.0679697329768317,0.197318320688547,0,0,2.66876515691748,0.157115589916002,0,0,0,0,2.71610867871294,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0.647428837187895,1.02662806856247,0,0.971421986118279,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,5.14811475683202,0,0.981542335574726,0,0.4226557275834,0,1.12780701575824,1.09578409555081,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.135982980381829,0,0.5290268405154,2.23197010900051,3.69740502905135,0,0,0,0.253397002022874,0,0,0,0,2.57647573942014,0.803892390468535,0,0,2.98527574661373,0.952257725854961,0,0.124149428591716,0,1.40023748211963,0.202117188958219,2.8303177226605,0,0.404112318087525,0.78894425931944,0.99798106963804,0,0,0,0,0,2.93379466038879,0.406896178315738,16.6439193546378,1.81146414231924,0 | |||
|short_description=p6@PRELP | |||
}} |
Revision as of 02:55, 12 September 2013
Short description: | p6@PRELP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PRELP_5end |
Coexpression cluster: | C930_Chondrocyte_vagina_heart_Adipocyte_aorta_bladder_mature |
Association with transcript: | 107bp_to_CR541787, CR542270_5end |
EntrezGene: | PRELP |
HGNC: | 9357 |
UniProt: | Q6FHG6Q6FG38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.64e-15 | 15 |
GAG secreting cell | 1.66e-12 | 9 |
carbohydrate secreting cell | 1.66e-12 | 9 |
adipocyte of omentum tissue | 6.21e-11 | 3 |
chondroblast | 7.80e-09 | 6 |
chondrocyte | 7.80e-09 | 6 |
adipocyte of breast | 2.48e-07 | 2 |
extracellular matrix secreting cell | 3.46e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.05e-23 | 114 |
cavity lining | 2.06e-15 | 12 |
serous membrane | 2.06e-15 | 12 |
valve | 1.04e-10 | 3 |
cardiac mesenchyme | 1.04e-10 | 3 |
cardial valve | 1.04e-10 | 3 |
tunica intima | 1.04e-10 | 3 |
heart layer | 1.04e-10 | 3 |
endocardium | 1.04e-10 | 3 |
endocardial cushion | 1.04e-10 | 3 |
presumptive endocardium | 1.04e-10 | 3 |
male genital duct | 1.91e-09 | 3 |
internal male genitalia | 1.91e-09 | 3 |
omentum | 6.91e-09 | 6 |
peritoneum | 6.91e-09 | 6 |
abdominal cavity | 6.91e-09 | 6 |
visceral peritoneum | 6.91e-09 | 6 |
atrioventricular valve | 1.20e-07 | 2 |
body cavity or lining | 1.26e-07 | 49 |
perirenal fat | 1.70e-07 | 2 |
cardiac atrium | 2.05e-07 | 2 |
future cardiac atrium | 2.05e-07 | 2 |
duct of male reproductive system | 3.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.88e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.