FFCP PHASE1:Hg19::chr1:201708643..201708716,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001gwv.1_5end | |||
|description=CAGE_peak_8_at_NAV1_5end | |||
|id=chr1:201708643..201708716,+ | |||
|ontology_enrichment_celltype=CL:0000359!2.70e-12!32;CL:0000055!3.30e-12!180;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000183!2.62e-10!59;CL:0000187!3.65e-10!54;CL:0000136!4.17e-10!15;CL:0000192!7.23e-10!42;CL:0000514!7.23e-10!42;CL:0000222!3.09e-08!119;CL:0000393!4.29e-08!60;CL:0000211!4.29e-08!60;CL:0002494!1.53e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-17;32!CL:0000136;2.47e-13;13!CL:0000192;1.16e-08;43!CL:0002494;5.99e-07;16!CL:0002548;8.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.31e-18,32;CL:0000136,6.52e-15,15;CL:0000192,3.25e-11,43;CL:0000514,3.25e-11,43;CL:0000187,1.81e-09,55;CL:0000680,2.87e-09,58;CL:0000056,2.87e-09,58;CL:0000355,2.87e-09,58;CL:0000393,1.03e-07,61;CL:0000211,1.03e-07,61;CL:0002494,5.02e-07,16;CL:0002548,6.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.16e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.29e-16!79;UBERON:0007798!1.29e-16!79;UBERON:0004872!4.17e-16!84;UBERON:0000119!1.52e-15!312;UBERON:0001009!7.59e-15!113;UBERON:0000483!1.49e-14!309;UBERON:0004535!1.83e-14!110;UBERON:0001637!6.05e-14!42;UBERON:0003509!6.05e-14!42;UBERON:0004572!6.05e-14!42;UBERON:0000025!8.11e-14!194;UBERON:0000475!1.59e-13!365;UBERON:0000477!3.75e-13!286;UBERON:0002616!1.22e-12!59;UBERON:0001981!1.75e-12!60;UBERON:0007500!1.75e-12!60;UBERON:0004537!1.75e-12!60;UBERON:0006965!1.75e-12!60;UBERON:0003075!3.29e-12!86;UBERON:0007284!3.29e-12!86;UBERON:0004573!4.76e-12!33;UBERON:0004571!4.76e-12!33;UBERON:0004111!7.09e-12!241;UBERON:0002346!3.47e-11!90;UBERON:0000055!8.88e-11!69;UBERON:0002385!3.94e-10!63;UBERON:0001015!3.94e-10!63;UBERON:0000383!3.94e-10!63;UBERON:0001134!4.05e-10!61;UBERON:0002036!4.05e-10!61;UBERON:0003082!4.05e-10!61;UBERON:0001049!4.80e-10!57;UBERON:0005068!4.80e-10!57;UBERON:0006241!4.80e-10!57;UBERON:0007135!4.80e-10!57;UBERON:0000955!1.04e-09!69;UBERON:0006238!1.04e-09!69;UBERON:0000033!1.84e-09!123;UBERON:0000486!3.26e-09!82;UBERON:0003056!3.27e-09!61;UBERON:0000153!7.51e-09!129;UBERON:0007811!7.51e-09!129;UBERON:0005743!1.21e-08!86;UBERON:0001017!1.26e-08!82;UBERON:0007100!1.40e-08!27;UBERON:0007023!1.89e-08!115;UBERON:0000948!2.27e-08!24;UBERON:0005498!2.27e-08!24;UBERON:0004140!2.27e-08!24;UBERON:0009881!2.27e-08!24;UBERON:0004141!2.27e-08!24;UBERON:0003084!2.27e-08!24;UBERON:0007005!2.27e-08!24;UBERON:0004139!2.27e-08!24;UBERON:0004291!2.27e-08!24;UBERON:0002200!3.58e-08!11;UBERON:0006876!3.58e-08!11;UBERON:0003914!4.28e-08!118;UBERON:0003080!8.63e-08!42;UBERON:0004290!1.45e-07!70;UBERON:0001893!1.60e-07!34;UBERON:0000481!1.63e-07!347;UBERON:0002780!2.06e-07!41;UBERON:0001890!2.06e-07!41;UBERON:0006240!2.06e-07!41;UBERON:0000073!2.25e-07!94;UBERON:0001016!2.25e-07!94;UBERON:0002020!2.71e-07!34;UBERON:0003528!2.71e-07!34;UBERON:0002791!3.16e-07!33;UBERON:0004121!3.25e-07!169;UBERON:0000914!5.32e-07!83;UBERON:0002329!5.32e-07!83;UBERON:0003077!5.32e-07!83;UBERON:0003059!5.32e-07!83;UBERON:0007282!5.32e-07!83;UBERON:0009618!5.32e-07!83;UBERON:0007285!5.32e-07!83;UBERON:0001869!7.55e-07!32;UBERON:0000924!9.03e-07!173;UBERON:0006601!9.03e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.38e-13;33!UBERON:0004571;1.38e-13;33!UBERON:0001637;1.29e-12;42!UBERON:0003509;1.29e-12;42!UBERON:0004572;1.29e-12;42!UBERON:0006876;3.35e-10;11!UBERON:0002049;4.06e-09;75!UBERON:0007798;4.06e-09;75!UBERON:0007500;2.61e-08;56!UBERON:0001981;2.61e-08;56!UBERON:0004537;2.61e-08;56!UBERON:0003688;2.45e-07;6!UBERON:0002358;2.45e-07;6!UBERON:0003684;2.45e-07;6!UBERON:0001178;2.45e-07;6!UBERON:0001893;2.82e-07;34!UBERON:0000948;2.90e-07;22!UBERON:0005284;9.45e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.01e-18,42;UBERON:0003509,3.01e-18,42;UBERON:0004572,3.01e-18,42;UBERON:0002049,4.45e-18,78;UBERON:0007798,4.45e-18,78;UBERON:0004535,7.39e-17,109;UBERON:0004872,1.83e-16,83;UBERON:0000025,2.17e-16,192;UBERON:0004573,4.33e-16,33;UBERON:0004571,4.33e-16,33;UBERON:0001009,6.26e-16,112;UBERON:0007500,1.34e-14,59;UBERON:0001981,1.34e-14,59;UBERON:0004537,1.34e-14,59;UBERON:0006965,1.34e-14,59;UBERON:0000119,6.04e-12,309;UBERON:0010314,1.21e-11,132;UBERON:0000055,3.57e-11,68;UBERON:0000955,6.26e-11,68;UBERON:0006238,6.26e-11,68;UBERON:0003914,6.92e-11,117;UBERON:0000483,7.09e-11,306;UBERON:0003075,2.90e-10,82;UBERON:0007284,2.90e-10,82;UBERON:0006876,4.05e-10,11;UBERON:0004111,6.66e-10,240;UBERON:0000073,8.49e-10,53;UBERON:0002616,8.49e-10,53;UBERON:0001049,1.71e-09,56;UBERON:0005068,1.71e-09,56;UBERON:0006241,1.71e-09,56;UBERON:0007135,1.71e-09,56;UBERON:0001017,1.81e-09,81;UBERON:0002346,2.88e-09,86;UBERON:0000948,1.56e-08,24;UBERON:0005498,1.56e-08,24;UBERON:0004140,1.56e-08,24;UBERON:0009881,1.56e-08,24;UBERON:0004141,1.56e-08,24;UBERON:0003084,1.56e-08,24;UBERON:0007005,1.56e-08,24;UBERON:0004139,1.56e-08,24;UBERON:0004291,1.56e-08,24;UBERON:0001016,3.39e-08,89;UBERON:0003056,3.41e-08,61;UBERON:0002780,3.75e-08,41;UBERON:0001890,3.75e-08,41;UBERON:0003080,3.75e-08,41;UBERON:0006240,3.75e-08,41;UBERON:0001134,4.10e-08,62;UBERON:0002036,4.10e-08,62;UBERON:0003082,4.10e-08,62;UBERON:0001893,4.46e-08,34;UBERON:0010371,6.74e-08,104;UBERON:0002385,1.34e-07,64;UBERON:0001015,1.34e-07,64;UBERON:0000383,1.34e-07,64;UBERON:0001869,3.74e-07,32;UBERON:0003528,3.85e-07,34;UBERON:0002020,3.85e-07,34;UBERON:0002791,4.28e-07,32;UBERON:0003688,4.48e-07,6;UBERON:0002358,4.48e-07,6;UBERON:0003684,4.48e-07,6;UBERON:0001178,4.48e-07,6;UBERON:0007100,4.53e-07,27;UBERON:0003077,5.12e-07,72;UBERON:0007285,5.12e-07,72;UBERON:0000486,6.83e-07,83;UBERON:0000947,7.24e-07,21;UBERON:0010191,7.24e-07,21;UBERON:0007524,8.32e-07,73;UBERON:0005284,9.33e-07,5 | |||
|phase1_expression=2.54349730978779,5.56661362116556,9.02108186214215,2.00146596706261,7.15137751083661,11.3404008133048,10.1319951267324,0,18.8053652303884,0.245733936501509,0,0.655324116390517,0.527533956456907,0.123766352960047,1.65698687863958,2.6893005858071,0,0,0,5.0479633811483,4.89601658986207,1.25381888591235,1.71741592278634,0.684372125364421,2.63639543149086,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,2.42938867502708,2.1686349143074,10.0267582127178,3.33146993609895,4.7717156823066,3.40644409211845,2.26883561193763,6.65188192387692,7.20245242683634,0.523916301990851,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,1.67799774483962,1.10047216776027,0.835979866147242,0,0,0.33472061276467,0.402829317109147,0,0,0,5.67099363517232,0.0892997282840798,0,0,1.53316637465883,0,0.366403487860815,0,0,0.872188104285069,5.4666914686485,4.05217637326655,3.44263870114369,2.58152958673932,2.83734705758686,3.92474320099615,4.2699598291882,4.19334832309172,3.42332138939743,5.6578482269269,1.63461903113459,36.4771400624285,22.47086105472,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0,3.74326204428069,2.69084453533293,1.06778694409284,0.211931901159562,0.900273288253207,0.103052529238439,0.772921620136887,0.18611685633159,7.76371128309825,4.18979122193154,2.01947019395292,0.184099797284599,0.969876340912871,0,0.604512589365842,0.67824236924195,0.57978255948989,0.545492241181669,0.860413786167011,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,3.85944562915731,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,1.2347220339942,1.47008711385542,0,0,0,0,0,8.0636870840307,1.75600456653801,0,0.402115889646523,0.0925884451585296,0,0,1.44331342025273,0.695582429850461,16.0849911103076,0.288732895522148,0,0,0,1.71697232418975,0,0.234004265139238,0,0,1.6798212819886,1.70130116690864,0.268675568108545,0.581267877027924,0,0,0,0,0.144119953416961,0,0,0,0,3.4214489204541,0,0,0,1.56983518083505,5.23152082599936,2.12681028880755,0,3.57656445851882,0,0.531876233169741,3.12022310734098,0.257207374262142,1.41849132023278,0.799266537048298,2.00169191121407,14.1081617401775,3.29296134712308,0,1.42156779497018,0.791951872933429,8.44030255766841,5.22920075160176,9.9972991182057,0,0,0,4.31324739884849,3.44585807502342,0,0.434343920002738,1.64381058040307,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.981531933753119,2.00068208423871,0.271265023699736,2.28767947683888,0.356857977594324,0.473107245101804,1.28855556491985,2.10662269809403,0,1.03473071292505,2.65690239414175,0.553107505625109,0,4.69922777910577,2.40200396667599,0,0,0,0,0,0.907170879989041,7.69134204238208,7.51963669111506,3.08726103876381,7.68834895534206,2.04682899626681,3.05622450172854,1.48418066444991,0,0,0.164254312027618,0,0.116210378459959,0,2.20557117333613,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,1.30012049207304,1.6068392984416,0,1.23238893691716,0.614014698904518,0.137836572484531,0.107420244868274,0.435050081742686,0.340906509664404,0,0.661139661443912,0.576570202095319,1.78657797492418,0,4.18360994367557,6.92587163027408,2.7881490806424,10.473141725987,4.7907542728532,1.73986598415015,2.40921484835096,1.43124886741991,4.46590043231601,4.42931194606216,2.47819252100972,0.255897791311334,0,4.45484547096312,7.8494864019923,0,0.54907405947211,0.235624804691373,5.66110948405285,6.34041284692033,2.52755073743389,0,3.1682753652067,2.11300293513511,0.136499911407986,0.141405431953713,1.13008116620243,8.27048015319186,2.65375590096488,3.94605796728386,0.578775534266688,0,1.01455188481352,1.239293992399,0,0.573645408816206,1.47373561519682,1.426684205925,0,0.422215270595328,0.329294892959902,2.27683904259429,0.699869440489966,0.192444225451024,0,0,0.0941438007767792,3.44404298136984,5.05414427002877,2.66058092122005,2.52695740227655,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,1.40669416410513,0,0,0,6.77443160053637,0.552567831062295,0,0,0,1.55519793830904,0,0,0,0.493217028184668,0,0,1.93866549219044,1.11321717794222,0,0,0,2.17499872630438,0,0,0,0,0,0.173624994933292,0.885741385813839,0.60298219312704,0,1.21637185924347,0.886642856860642,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,2.6286441862464,0.802577647298789,0.468528891450678,0.182454789215666,0,0.485560759068186,0,0,0,5.87635190544938,0,0,0,1.323967823502,0.627865836814451,2.38944859545918,0,0,0,0.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| |||
|short_description=p8@NAV1 | |||
}} |
Revision as of 02:47, 12 September 2013
Short description: | p8@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_NAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001gwv.1_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.31e-18 | 32 |
fat cell | 6.52e-15 | 15 |
smooth muscle cell | 3.25e-11 | 43 |
smooth muscle myoblast | 3.25e-11 | 43 |
muscle cell | 1.81e-09 | 55 |
muscle precursor cell | 2.87e-09 | 58 |
myoblast | 2.87e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-09 | 58 |
electrically responsive cell | 1.03e-07 | 61 |
electrically active cell | 1.03e-07 | 61 |
cardiocyte | 5.02e-07 | 16 |
cardiac fibroblast | 6.58e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.