FFCP PHASE1:Hg19::chr1:201342364..201342403,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7139|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11949|TSSclassifier=S|UniProt=F8W748,P45379,F8W9V2,Q9BUF6|association_with_transcript=0bp_to_ENST00000236918,ENST00000357848,ENST00000360372,ENST00000367315,ENST00000367317,ENST00000475686,uc001gwl.1_5end|coexpression_cluster_id=C20|description=CAGE_peak_3_at_TNNT2_5end|id=chr1:201342364..201342403,-|ontology_enrichment_celltype=CL:0000188!1.55e-13!9|ontology_enrichment_celltype_v019=CL:0002575;4.83e-07;2|ontology_enrichment_celltype_v019_2=CL:0002575,4.98e-07,2|ontology_enrichment_development_v019=UBERON:0005062;1.41e-27;4!UBERON:0007284;1.41e-27;4!UBERON:0010226;2.05e-13;1!UBERON:0010227;3.76e-13;1!UBERON:0004140;4.23e-13;1!UBERON:0000358;5.38e-13;1!UBERON:0003104;3.91e-09;31|ontology_enrichment_disease=DOID:114!4.76e-07!2|ontology_enrichment_disease_v019=DOID:114;5.58e-25;2!DOID:178;2.95e-13;1!DOID:326;2.95e-13;1!DOID:3978;2.95e-13;1!DOID:3394;2.95e-13;1!DOID:5844;2.95e-13;1!DOID:1287;5.39e-13;4|ontology_enrichment_disease_v019_2=DOID:114,5.58e-25,2;DOID:178,2.95e-13,1;DOID:326,2.95e-13,1;DOID:3978,2.95e-13,1;DOID:3394,2.95e-13,1;DOID:5844,2.95e-13,1;DOID:1287,5.39e-13,4|ontology_enrichment_uberon=UBERON:0007023!2.37e-19!115;UBERON:0003978!9.56e-10!3;UBERON:0009751!9.56e-10!3;UBERON:0000946!9.56e-10!3;UBERON:0002523!9.56e-10!3;UBERON:0005983!9.56e-10!3;UBERON:0002165!9.56e-10!3;UBERON:0002062!9.56e-10!3;UBERON:0007280!9.56e-10!3;UBERON:0004151!1.10e-09!3;UBERON:0003103!3.11e-08!69;UBERON:0001872!3.69e-08!5;UBERON:0001950!6.51e-08!20;UBERON:0007100!3.40e-07!27;UBERON:0002619!4.40e-07!22;UBERON:0002133!4.76e-07!2;UBERON:0002081!5.64e-07!2|ontology_enrichment_uberon_v019=UBERON:0007100;1.92e-37;25!UBERON:0003978;1.64e-36;3!UBERON:0000946;1.64e-36;3!UBERON:0004151;2.98e-36;3!UBERON:0002133;5.58e-25;2!UBERON:0002081;1.15e-24;2!UBERON:0000948;3.69e-19;22!UBERON:0002135;1.82e-13;1!UBERON:0002084;2.05e-13;1!UBERON:0002082;2.05e-13;1!UBERON:0002146;2.32e-13;1!UBERON:0005623;2.32e-13;1!UBERON:0002134;2.62e-13;1!UBERON:0005208;2.62e-13;1!UBERON:0004145;2.62e-13;1!UBERON:0005946;2.62e-13;1!UBERON:0005965;2.62e-13;1!UBERON:0002078;2.62e-13;1!UBERON:0002079;3.76e-13;1!UBERON:0007029;8.15e-13;1!UBERON:0010313;2.07e-11;10!UBERON:0003103;1.40e-09;61|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.64e-36,3;UBERON:0009751,1.64e-36,3;UBERON:0000946,1.64e-36,3;UBERON:0002523,1.64e-36,3;UBERON:0005983,1.64e-36,3;UBERON:0002165,1.64e-36,3;UBERON:0002062,1.64e-36,3;UBERON:0007280,1.64e-36,3;UBERON:0004151,2.98e-36,3;UBERON:0007100,1.33e-34,27;UBERON:0002133,5.58e-25,2;UBERON:0002081,1.15e-24,2;UBERON:0010227,1.15e-24,2;UBERON:0000948,1.54e-17,24;UBERON:0005498,1.54e-17,24;UBERON:0004140,1.54e-17,24;UBERON:0009881,1.54e-17,24;UBERON:0004141,1.54e-17,24;UBERON:0003084,1.54e-17,24;UBERON:0007005,1.54e-17,24;UBERON:0004139,1.54e-17,24;UBERON:0004291,1.54e-17,24;UBERON:0003103,3.18e-16,68;UBERON:0004797,4.77e-16,7;UBERON:0002135,1.82e-13,1;UBERON:0002084,2.06e-13,1;UBERON:0002082,2.06e-13,1;UBERON:0010226,2.06e-13,1;UBERON:0002146,2.32e-13,1;UBERON:0005623,2.32e-13,1;UBERON:0002134,2.62e-13,1;UBERON:0005208,2.62e-13,1;UBERON:0005946,2.62e-13,1;UBERON:0005965,2.62e-13,1;UBERON:0002078,2.62e-13,1;UBERON:0002079,3.76e-13,1;UBERON:0007029,7.68e-13,1;UBERON:0010313,2.07e-11,10;UBERON:0002342,2.07e-11,10;UBERON:0005062,2.07e-11,10;UBERON:0001009,1.55e-07,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.676695028044854,0.154048617114644,0.15350367472613,0.964856007391714,0,0.145016693914229,0.340906509664404,5.43095417445098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,9.62479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |||
|TSSclassifier=S | |||
|UniProt=F8W748,P45379,F8W9V2,Q9BUF6 | |||
|association_with_transcript=0bp_to_ENST00000236918,ENST00000357848,ENST00000360372,ENST00000367315,ENST00000367317,ENST00000475686,uc001gwl.1_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_TNNT2_5end | |||
|id=chr1:201342364..201342403,- | |||
|ontology_enrichment_celltype=CL:0000188!1.55e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0002575;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.41e-27;4!UBERON:0007284;1.41e-27;4!UBERON:0010226;2.05e-13;1!UBERON:0010227;3.76e-13;1!UBERON:0004140;4.23e-13;1!UBERON:0000358;5.38e-13;1!UBERON:0003104;3.91e-09;31 | |||
|ontology_enrichment_disease=DOID:114!4.76e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;5.58e-25;2!DOID:178;2.95e-13;1!DOID:326;2.95e-13;1!DOID:3978;2.95e-13;1!DOID:3394;2.95e-13;1!DOID:5844;2.95e-13;1!DOID:1287;5.39e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.58e-25,2;DOID:178,2.95e-13,1;DOID:326,2.95e-13,1;DOID:3978,2.95e-13,1;DOID:3394,2.95e-13,1;DOID:5844,2.95e-13,1;DOID:1287,5.39e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-19!115;UBERON:0003978!9.56e-10!3;UBERON:0009751!9.56e-10!3;UBERON:0000946!9.56e-10!3;UBERON:0002523!9.56e-10!3;UBERON:0005983!9.56e-10!3;UBERON:0002165!9.56e-10!3;UBERON:0002062!9.56e-10!3;UBERON:0007280!9.56e-10!3;UBERON:0004151!1.10e-09!3;UBERON:0003103!3.11e-08!69;UBERON:0001872!3.69e-08!5;UBERON:0001950!6.51e-08!20;UBERON:0007100!3.40e-07!27;UBERON:0002619!4.40e-07!22;UBERON:0002133!4.76e-07!2;UBERON:0002081!5.64e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.92e-37;25!UBERON:0003978;1.64e-36;3!UBERON:0000946;1.64e-36;3!UBERON:0004151;2.98e-36;3!UBERON:0002133;5.58e-25;2!UBERON:0002081;1.15e-24;2!UBERON:0000948;3.69e-19;22!UBERON:0002135;1.82e-13;1!UBERON:0002084;2.05e-13;1!UBERON:0002082;2.05e-13;1!UBERON:0002146;2.32e-13;1!UBERON:0005623;2.32e-13;1!UBERON:0002134;2.62e-13;1!UBERON:0005208;2.62e-13;1!UBERON:0004145;2.62e-13;1!UBERON:0005946;2.62e-13;1!UBERON:0005965;2.62e-13;1!UBERON:0002078;2.62e-13;1!UBERON:0002079;3.76e-13;1!UBERON:0007029;8.15e-13;1!UBERON:0010313;2.07e-11;10!UBERON:0003103;1.40e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.64e-36,3;UBERON:0009751,1.64e-36,3;UBERON:0000946,1.64e-36,3;UBERON:0002523,1.64e-36,3;UBERON:0005983,1.64e-36,3;UBERON:0002165,1.64e-36,3;UBERON:0002062,1.64e-36,3;UBERON:0007280,1.64e-36,3;UBERON:0004151,2.98e-36,3;UBERON:0007100,1.33e-34,27;UBERON:0002133,5.58e-25,2;UBERON:0002081,1.15e-24,2;UBERON:0010227,1.15e-24,2;UBERON:0000948,1.54e-17,24;UBERON:0005498,1.54e-17,24;UBERON:0004140,1.54e-17,24;UBERON:0009881,1.54e-17,24;UBERON:0004141,1.54e-17,24;UBERON:0003084,1.54e-17,24;UBERON:0007005,1.54e-17,24;UBERON:0004139,1.54e-17,24;UBERON:0004291,1.54e-17,24;UBERON:0003103,3.18e-16,68;UBERON:0004797,4.77e-16,7;UBERON:0002135,1.82e-13,1;UBERON:0002084,2.06e-13,1;UBERON:0002082,2.06e-13,1;UBERON:0010226,2.06e-13,1;UBERON:0002146,2.32e-13,1;UBERON:0005623,2.32e-13,1;UBERON:0002134,2.62e-13,1;UBERON:0005208,2.62e-13,1;UBERON:0005946,2.62e-13,1;UBERON:0005965,2.62e-13,1;UBERON:0002078,2.62e-13,1;UBERON:0002079,3.76e-13,1;UBERON:0007029,7.68e-13,1;UBERON:0010313,2.07e-11,10;UBERON:0002342,2.07e-11,10;UBERON:0005062,2.07e-11,10;UBERON:0001009,1.55e-07,112 | |||
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|short_description=p3@TNNT2 | |||
}} |
Revision as of 02:44, 12 September 2013
Short description: | p3@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000236918, ENST00000357848, ENST00000360372, ENST00000367315, ENST00000367317, ENST00000475686, uc001gwl.1_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | F8W748P45379F8W9V2Q9BUF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.58e-25 | 2 |
vascular disease | 2.95e-13 | 1 |
ischemia | 2.95e-13 | 1 |
extrinsic cardiomyopathy | 2.95e-13 | 1 |
myocardial ischemia | 2.95e-13 | 1 |
myocardial infarction | 2.95e-13 | 1 |
cardiovascular system disease | 5.39e-13 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.