FFCP PHASE1:Hg19::chr1:192545731..192545733,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C537|description=CAGE_peak_at_chr1:192545731..192545733,+|id=chr1:192545731..192545733,+|ontology_enrichment_celltype=CL:0000738!8.99e-43!140;CL:0002031!5.22e-35!124;CL:0002087!6.23e-35!119;CL:0000037!4.44e-32!172;CL:0000566!4.44e-32!172;CL:0002057!3.96e-31!42;CL:0000988!3.31e-30!182;CL:0002032!1.70e-29!165;CL:0000837!1.70e-29!165;CL:0000860!2.22e-28!45;CL:0000557!2.57e-24!71;CL:0002009!5.50e-24!65;CL:0000766!5.24e-23!76;CL:0002194!1.38e-21!63;CL:0000576!1.38e-21!63;CL:0000040!1.38e-21!63;CL:0000559!1.38e-21!63;CL:0000839!1.69e-21!70;CL:0000763!4.94e-18!112;CL:0000049!4.94e-18!112;CL:0000624!3.17e-11!6;CL:0000838!3.75e-11!52;CL:0000542!8.02e-11!53;CL:0000051!8.02e-11!53;CL:0000453!4.54e-09!5;CL:0000451!4.11e-07!10;CL:0000791!6.23e-07!18;CL:0000789!6.23e-07!18;CL:0002420!6.23e-07!18;CL:0002419!6.23e-07!18;CL:0000790!6.23e-07!18;CL:0000990!9.78e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.31e-23;33!CL:0002057;1.31e-23;33!CL:0000473;1.81e-19;39!CL:0000234;1.81e-19;39!CL:0000576;4.54e-16;48!CL:0000766;9.05e-15;69!CL:0001014;1.24e-11;2!CL:0001016;1.24e-11;2!CL:0000453;4.75e-10;5!CL:0002087;4.99e-09;104!CL:0000624;1.01e-08;6!CL:0002393;2.77e-08;6!CL:0002397;2.77e-08;6!CL:0000623;4.88e-08;3!CL:0000738;1.02e-07;136!CL:0000791;2.52e-07;18!CL:0000789;2.52e-07;18!CL:0002419;2.52e-07;18|ontology_enrichment_celltype_v019_2=CL:0002031,4.97e-31,120;CL:0000557,9.19e-30,67;CL:0000860,4.44e-29,42;CL:0002057,4.44e-29,42;CL:0000738,8.66e-29,136;CL:0000473,2.61e-28,48;CL:0000234,2.61e-28,48;CL:0002009,9.92e-27,61;CL:0000839,2.09e-24,66;CL:0002032,2.17e-23,161;CL:0000837,2.17e-23,161;CL:0002087,2.41e-23,115;CL:0000037,3.64e-22,168;CL:0000766,4.71e-22,72;CL:0002194,6.78e-22,59;CL:0000576,6.78e-22,59;CL:0000040,6.78e-22,59;CL:0000559,6.78e-22,59;CL:0000988,9.91e-21,177;CL:0000763,1.25e-18,108;CL:0000049,1.25e-18,108;CL:0001014,1.54e-11,2;CL:0001016,1.54e-11,2;CL:0000453,7.36e-10,5;CL:0000624,1.07e-08,6;CL:0000623,3.68e-08,3;CL:0000825,3.68e-08,3;CL:0000791,2.27e-07,18;CL:0000789,2.27e-07,18;CL:0002420,2.27e-07,18;CL:0002419,2.27e-07,18;CL:0000790,2.27e-07,18;CL:0000134,2.73e-07,354;CL:0002320,4.97e-07,361|ontology_enrichment_development_v019=CL:0002057;1.86e-20;42!CL:0000790;2.52e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.57e-22!102;UBERON:0003061!9.57e-22!102;UBERON:0002371!2.66e-20!80;UBERON:0002193!1.27e-18!112;UBERON:0001474!4.16e-18!86;UBERON:0004765!1.00e-14!101;UBERON:0001434!1.00e-14!101;UBERON:0002405!4.59e-14!115;UBERON:0002298!4.09e-08!8|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.72e-26,76;UBERON:0001474,1.53e-23,82;UBERON:0004765,4.61e-21,90;UBERON:0002405,3.05e-20,93;UBERON:0002390,5.51e-19,98;UBERON:0003061,5.51e-19,98;UBERON:0001434,1.62e-18,100;UBERON:0002193,8.08e-17,108;UBERON:0002204,1.92e-10,167;UBERON:0003081,6.71e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.157421562627358,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0,0,1.10799081706375,1.40381113229099,1.51907609501096,0,0,0,0,0.755751887377619,0,0.929716147622738,1.23350366406548,0.929119112685311,2.01384674625505,1.7931249457037,2.12834006899727,4.48169384957604,3.22742341791913,2.70852973188684,0,0.272906150057846,0.449446968890169,8.57034898638527,6.09765151444578,10.2293940127847,0.329851300186716,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,1.7587406567972,1.5644487552606,1.3031330682307,0,0,0.632924774881769,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0.786839080455332,5.50215067848831,2.87842098599313,0,0.977766799900771,2.36723902867367,3.89653456815823,0.222820913770347,1.17842362989935,0.664601683750863,1.89562704635511,0.384273959177026,0.910415432919148,0,0,0,0.593146252648242,0,0,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.604820229674197,4.54648332831962,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45003920808834,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.788123040807709,2.37190332345469,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0,1.60515529459758,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.837847203816763,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.136203406111576,0,0,0,1.349843349309,2.32140586367385,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,1.72022758707021,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.0629187225069,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.310298987585686,0,0,0.129177819672012,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0.320568492303233|short_description=p@chr1:192545731..192545733,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_at_chr1:192545731..192545733,+ | |||
|id=chr1:192545731..192545733,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.99e-43!140;CL:0002031!5.22e-35!124;CL:0002087!6.23e-35!119;CL:0000037!4.44e-32!172;CL:0000566!4.44e-32!172;CL:0002057!3.96e-31!42;CL:0000988!3.31e-30!182;CL:0002032!1.70e-29!165;CL:0000837!1.70e-29!165;CL:0000860!2.22e-28!45;CL:0000557!2.57e-24!71;CL:0002009!5.50e-24!65;CL:0000766!5.24e-23!76;CL:0002194!1.38e-21!63;CL:0000576!1.38e-21!63;CL:0000040!1.38e-21!63;CL:0000559!1.38e-21!63;CL:0000839!1.69e-21!70;CL:0000763!4.94e-18!112;CL:0000049!4.94e-18!112;CL:0000624!3.17e-11!6;CL:0000838!3.75e-11!52;CL:0000542!8.02e-11!53;CL:0000051!8.02e-11!53;CL:0000453!4.54e-09!5;CL:0000451!4.11e-07!10;CL:0000791!6.23e-07!18;CL:0000789!6.23e-07!18;CL:0002420!6.23e-07!18;CL:0002419!6.23e-07!18;CL:0000790!6.23e-07!18;CL:0000990!9.78e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-23;33!CL:0002057;1.31e-23;33!CL:0000473;1.81e-19;39!CL:0000234;1.81e-19;39!CL:0000576;4.54e-16;48!CL:0000766;9.05e-15;69!CL:0001014;1.24e-11;2!CL:0001016;1.24e-11;2!CL:0000453;4.75e-10;5!CL:0002087;4.99e-09;104!CL:0000624;1.01e-08;6!CL:0002393;2.77e-08;6!CL:0002397;2.77e-08;6!CL:0000623;4.88e-08;3!CL:0000738;1.02e-07;136!CL:0000791;2.52e-07;18!CL:0000789;2.52e-07;18!CL:0002419;2.52e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.97e-31,120;CL:0000557,9.19e-30,67;CL:0000860,4.44e-29,42;CL:0002057,4.44e-29,42;CL:0000738,8.66e-29,136;CL:0000473,2.61e-28,48;CL:0000234,2.61e-28,48;CL:0002009,9.92e-27,61;CL:0000839,2.09e-24,66;CL:0002032,2.17e-23,161;CL:0000837,2.17e-23,161;CL:0002087,2.41e-23,115;CL:0000037,3.64e-22,168;CL:0000766,4.71e-22,72;CL:0002194,6.78e-22,59;CL:0000576,6.78e-22,59;CL:0000040,6.78e-22,59;CL:0000559,6.78e-22,59;CL:0000988,9.91e-21,177;CL:0000763,1.25e-18,108;CL:0000049,1.25e-18,108;CL:0001014,1.54e-11,2;CL:0001016,1.54e-11,2;CL:0000453,7.36e-10,5;CL:0000624,1.07e-08,6;CL:0000623,3.68e-08,3;CL:0000825,3.68e-08,3;CL:0000791,2.27e-07,18;CL:0000789,2.27e-07,18;CL:0002420,2.27e-07,18;CL:0002419,2.27e-07,18;CL:0000790,2.27e-07,18;CL:0000134,2.73e-07,354;CL:0002320,4.97e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-20;42!CL:0000790;2.52e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.57e-22!102;UBERON:0003061!9.57e-22!102;UBERON:0002371!2.66e-20!80;UBERON:0002193!1.27e-18!112;UBERON:0001474!4.16e-18!86;UBERON:0004765!1.00e-14!101;UBERON:0001434!1.00e-14!101;UBERON:0002405!4.59e-14!115;UBERON:0002298!4.09e-08!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.72e-26,76;UBERON:0001474,1.53e-23,82;UBERON:0004765,4.61e-21,90;UBERON:0002405,3.05e-20,93;UBERON:0002390,5.51e-19,98;UBERON:0003061,5.51e-19,98;UBERON:0001434,1.62e-18,100;UBERON:0002193,8.08e-17,108;UBERON:0002204,1.92e-10,167;UBERON:0003081,6.71e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.157421562627358,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0,0,1.10799081706375,1.40381113229099,1.51907609501096,0,0,0,0,0.755751887377619,0,0.929716147622738,1.23350366406548,0.929119112685311,2.01384674625505,1.7931249457037,2.12834006899727,4.48169384957604,3.22742341791913,2.70852973188684,0,0.272906150057846,0.449446968890169,8.57034898638527,6.09765151444578,10.2293940127847,0.329851300186716,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,1.7587406567972,1.5644487552606,1.3031330682307,0,0,0.632924774881769,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0.786839080455332,5.50215067848831,2.87842098599313,0,0.977766799900771,2.36723902867367,3.89653456815823,0.222820913770347,1.17842362989935,0.664601683750863,1.89562704635511,0.384273959177026,0.910415432919148,0,0,0,0.593146252648242,0,0,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0.604820229674197,4.54648332831962,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45003920808834,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.788123040807709,2.37190332345469,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0,1.60515529459758,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.837847203816763,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.136203406111576,0,0,0,1.349843349309,2.32140586367385,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,1.72022758707021,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.0629187225069,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.310298987585686,0,0,0.129177819672012,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0.320568492303233 | |||
|short_description=p@chr1:192545731..192545733,+ | |||
}} |
Revision as of 02:28, 12 September 2013
Short description: | p@chr1:192545731..192545733, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:192545731..192545733, + |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.72e-26 | 76 |
bone element | 1.53e-23 | 82 |
skeletal element | 4.61e-21 | 90 |
immune system | 3.05e-20 | 93 |
hematopoietic system | 5.51e-19 | 98 |
blood island | 5.51e-19 | 98 |
skeletal system | 1.62e-18 | 100 |
hemolymphoid system | 8.08e-17 | 108 |
musculoskeletal system | 1.92e-10 | 167 |
lateral plate mesoderm | 6.71e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.