FFCP PHASE1:Hg19::chr1:173446463..173446490,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9588 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16753 | |||
|TSSclassifier=S | |||
|UniProt=P30041 | |||
|association_with_transcript=0bp_to_ENST00000460950,NM_004905,uc001giy.1_5end | |||
|description=CAGE_peak_1_at_PRDX6_5end | |||
|id=chr1:173446463..173446490,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.68e-18!180;CL:0000393!1.23e-13!60;CL:0000211!1.23e-13!60;CL:0002321!4.77e-13!248;CL:0000220!8.29e-13!246;CL:0000680!8.36e-13!57;CL:0000056!8.36e-13!57;CL:0000355!8.36e-13!57;CL:0000187!9.60e-13!54;CL:0000222!1.05e-12!119;CL:0000183!1.32e-12!59;CL:0000192!1.08e-10!42;CL:0000514!1.08e-10!42;CL:0000136!2.75e-08!15;CL:0000359!3.49e-08!32;CL:0000057!4.23e-08!75;CL:0002620!5.86e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.67e-08;13!CL:0000192;6.73e-08;43!CL:0000359;1.03e-07;32!CL:0000393;1.04e-07;61!CL:0000211;1.04e-07;61!CL:0000187;1.41e-07;55!CL:0002620;5.78e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.84e-14,61;CL:0000211,9.84e-14,61;CL:0002321,1.97e-13,250;CL:0000222,4.05e-13,121;CL:0000680,6.72e-13,58;CL:0000056,6.72e-13,58;CL:0000355,6.72e-13,58;CL:0000187,7.77e-13,55;CL:0000192,8.86e-11,43;CL:0000514,8.86e-11,43;CL:0000057,1.87e-08,76;CL:0000136,2.75e-08,15;CL:0000359,3.49e-08,32;CL:0002620,5.86e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;6.73e-08;43!CL:0000355;2.84e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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16041,64.7548354452531 | |||
|short_description=p1@PRDX6 | |||
}} |
Revision as of 01:51, 12 September 2013
Short description: | p1@PRDX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRDX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000460950, NM_004905, uc001giy.1_5end |
EntrezGene: | PRDX6 |
HGNC: | 16753 |
UniProt: | P30041 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.84e-14 | 61 |
electrically active cell | 9.84e-14 | 61 |
embryonic cell | 1.97e-13 | 250 |
mesodermal cell | 4.05e-13 | 121 |
muscle precursor cell | 6.72e-13 | 58 |
myoblast | 6.72e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.72e-13 | 58 |
muscle cell | 7.77e-13 | 55 |
smooth muscle cell | 8.86e-11 | 43 |
smooth muscle myoblast | 8.86e-11 | 43 |
fibroblast | 1.87e-08 | 76 |
fat cell | 2.75e-08 | 15 |
vascular associated smooth muscle cell | 3.49e-08 | 32 |
skin fibroblast | 5.86e-07 | 23 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.