FFCP PHASE1:Hg19::chr1:172134667..172134711,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C321|description=CAGE_peak_at_chr1:172134667..172134711,+|id=chr1:172134667..172134711,+|ontology_enrichment_celltype=CL:0000764!2.47e-11!2;CL:0000765!2.47e-11!2;CL:0000050!2.47e-11!2;CL:0000038!2.47e-11!2;CL:0000558!2.47e-11!2;CL:0000547!2.47e-11!2;CL:0000549!2.47e-11!2;CL:0000550!2.47e-11!2;CL:0000552!2.47e-11!2;CL:0002195!3.70e-11!2;CL:0002571!3.70e-11!2;CL:0000214!4.52e-08!3|ontology_enrichment_celltype_v019=CL:0000214;2.39e-66;3!CL:0000153;2.62e-23;9!CL:0000447;2.62e-23;9!CL:0000327;1.22e-14;15!CL:0000499;1.52e-08;28!CL:0002078;2.32e-07;45|ontology_enrichment_celltype_v019_2=CL:0000214,2.39e-66,3;CL:0000153,2.62e-23,9;CL:0000447,2.62e-23,9;CL:0000327,1.22e-14,15;CL:0000499,1.52e-08,28;CL:0000151,5.81e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1115;2.29e-11;20|ontology_enrichment_disease_v019_2=DOID:1115,2.29e-11,20|ontology_enrichment_uberon=UBERON:0002022!9.43e-21!1;UBERON:0001954!4.09e-11!2;UBERON:0003022!4.09e-11!2;UBERON:0002421!4.09e-11!2;UBERON:0002600!4.09e-11!2;UBERON:0002619!2.62e-08!22;UBERON:0006915!4.52e-08!3;UBERON:0002018!4.52e-08!3;UBERON:0002217!4.52e-08!3;UBERON:0007616!4.52e-08!3;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25|ontology_enrichment_uberon_v019=UBERON:0006915;2.39e-66;3!UBERON:0007616;2.39e-66;3!UBERON:0002217;2.39e-66;3!UBERON:0002018;2.39e-66;3!UBERON:0004905;5.22e-26;8!UBERON:0000982;5.22e-26;8!UBERON:0004770;5.22e-26;8!UBERON:0004457;2.62e-23;9!UBERON:0000042;2.62e-23;9!UBERON:0000486;6.76e-18;12!UBERON:0006914;2.15e-09;25|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.39e-66,3;UBERON:0007616,2.39e-66,3;UBERON:0002217,2.39e-66,3;UBERON:0002018,2.39e-66,3;UBERON:0004905,5.22e-26,8;UBERON:0000982,5.22e-26,8;UBERON:0004770,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0006914,2.15e-09,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5173240401025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:172134667..172134711,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_at_chr1:172134667..172134711,+ | |||
|id=chr1:172134667..172134711,+ | |||
|ontology_enrichment_celltype=CL:0000764!2.47e-11!2;CL:0000765!2.47e-11!2;CL:0000050!2.47e-11!2;CL:0000038!2.47e-11!2;CL:0000558!2.47e-11!2;CL:0000547!2.47e-11!2;CL:0000549!2.47e-11!2;CL:0000550!2.47e-11!2;CL:0000552!2.47e-11!2;CL:0002195!3.70e-11!2;CL:0002571!3.70e-11!2;CL:0000214!4.52e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000214;2.39e-66;3!CL:0000153;2.62e-23;9!CL:0000447;2.62e-23;9!CL:0000327;1.22e-14;15!CL:0000499;1.52e-08;28!CL:0002078;2.32e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,2.39e-66,3;CL:0000153,2.62e-23,9;CL:0000447,2.62e-23,9;CL:0000327,1.22e-14,15;CL:0000499,1.52e-08,28;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;2.29e-11;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,2.29e-11,20 | |||
|ontology_enrichment_uberon=UBERON:0002022!9.43e-21!1;UBERON:0001954!4.09e-11!2;UBERON:0003022!4.09e-11!2;UBERON:0002421!4.09e-11!2;UBERON:0002600!4.09e-11!2;UBERON:0002619!2.62e-08!22;UBERON:0006915!4.52e-08!3;UBERON:0002018!4.52e-08!3;UBERON:0002217!4.52e-08!3;UBERON:0007616!4.52e-08!3;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.39e-66;3!UBERON:0007616;2.39e-66;3!UBERON:0002217;2.39e-66;3!UBERON:0002018;2.39e-66;3!UBERON:0004905;5.22e-26;8!UBERON:0000982;5.22e-26;8!UBERON:0004770;5.22e-26;8!UBERON:0004457;2.62e-23;9!UBERON:0000042;2.62e-23;9!UBERON:0000486;6.76e-18;12!UBERON:0006914;2.15e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.39e-66,3;UBERON:0007616,2.39e-66,3;UBERON:0002217,2.39e-66,3;UBERON:0002018,2.39e-66,3;UBERON:0004905,5.22e-26,8;UBERON:0000982,5.22e-26,8;UBERON:0004770,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0006914,2.15e-09,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5173240401025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:172134667..172134711,+ | |||
}} |
Revision as of 01:48, 12 September 2013
Short description: | p@chr1:172134667..172134711, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:172134667..172134711, + |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 2.39e-66 | 3 |
GAG secreting cell | 2.62e-23 | 9 |
carbohydrate secreting cell | 2.62e-23 | 9 |
extracellular matrix secreting cell | 1.22e-14 | 15 |
stromal cell | 1.52e-08 | 28 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.39e-66 | 3 |
layer of synovial tissue | 2.39e-66 | 3 |
synovial joint | 2.39e-66 | 3 |
synovial membrane of synovial joint | 2.39e-66 | 3 |
articulation | 5.22e-26 | 8 |
skeletal joint | 5.22e-26 | 8 |
articular system | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
squamous epithelium | 2.15e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 2.29e-11 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.