FFCP PHASE1:Hg19::chr1:171501820..171501834,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23215|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=24903|TSSclassifier=S|UniProt=B4DM27|association_with_transcript=-98bp_to_AK297263_5end|coexpression_cluster_id=C852|description=CAGE_peak_13_at_PRRC2C_5end|id=chr1:171501820..171501834,+|ontology_enrichment_celltype=CL:0002087!1.38e-11!119;CL:0002031!8.89e-11!124;CL:0002032!1.22e-10!165;CL:0000837!1.22e-10!165;CL:0000860!2.64e-10!45;CL:0002057!4.64e-10!42;CL:0000738!6.65e-10!140;CL:0000037!1.54e-09!172;CL:0000566!1.54e-09!172;CL:0002194!6.32e-08!63;CL:0000576!6.32e-08!63;CL:0000040!6.32e-08!63;CL:0000559!6.32e-08!63;CL:0002009!9.37e-08!65;CL:0000988!1.05e-07!182;CL:0000839!1.86e-07!70;CL:0000557!2.60e-07!71;CL:0000766!9.67e-07!76|ontology_enrichment_celltype_v019=CL:0000860;4.33e-15;33!CL:0002057;4.33e-15;33!CL:0000473;1.53e-12;39!CL:0000234;1.53e-12;39!CL:0000576;1.53e-07;48|ontology_enrichment_celltype_v019_2=CL:0002087,7.07e-14,115;CL:0000473,1.40e-13,48;CL:0000234,1.40e-13,48;CL:0000860,1.54e-13,42;CL:0002057,1.54e-13,42;CL:0002031,7.93e-13,120;CL:0000738,1.78e-11,136;CL:0002032,1.92e-11,161;CL:0000837,1.92e-11,161;CL:0000037,4.64e-10,168;CL:0002009,7.11e-10,61;CL:0002194,8.91e-10,59;CL:0000576,8.91e-10,59;CL:0000040,8.91e-10,59;CL:0000559,8.91e-10,59;CL:0000557,1.58e-08,67;CL:0000988,1.69e-08,177;CL:0000839,4.03e-08,66;CL:0000766,8.31e-08,72|ontology_enrichment_development_v019=CL:0002057;2.59e-10;42|ontology_enrichment_disease=DOID:162!1.30e-09!235;DOID:14566!6.07e-09!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000956;8.05e-07;25!UBERON:0000203;8.05e-07;25!UBERON:0002791;9.79e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.32e-08,34;UBERON:0002020,5.32e-08,34;UBERON:0001049,3.10e-07,56;UBERON:0005068,3.10e-07,56;UBERON:0006241,3.10e-07,56;UBERON:0007135,3.10e-07,56;UBERON:0002371,3.17e-07,76;UBERON:0002791,4.70e-07,32|phase1_expression=0.363356758541113,1.07050261945492,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,1.09499540058307,1.00434111675842,1.98674854944673,1.31360943119913,1.65292640758726,0,0,0.464448369948228,0,0,0,1.16200800870452,3.69640004467296,0,0,2.60707781711184,3.47217393145363,0.223915474239924,0,0.257575567634187,2.90796477559129,3.77875943688809,1.4555043671269,1.85943229524548,5.75635043230556,1.54853185447552,2.8769239232215,3.07392847834921,0.709446689665756,3.10271112662957,2.5819387343353,4.06279459783025,3.9530891303947,3.82068610080984,0.224723484445085,5.20342617030534,1.28371610830437,5.75403413219137,1.64925650093358,3.59034583718937,3.83602275479425,7.83564944297177,4.53908179752912,3.11411124497787,7.78870862295904,6.25779502104242,0.434377689410233,3.02699751316684,2.20966581592539,2.53169909952708,0.211255286311942,0.850417199860174,0,0.22465726229299,0.750884464207532,0.803627933485401,0,0.39783335439818,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0,0,0,1.70763890732835,2.93618594685469,2.6759125968766,0,0,0.526768169550154,3.14735632182133,5.10913991573914,5.14003747498773,0,0.32592226663359,0.946895611469467,0,0.334231370655521,0,1.10766947291811,1.89562704635511,2.43373507478783,1.95089021339817,1.97325485524411,1.93445012450094,0.289803085735052,0.889719378972363,0.535081656179426,0,0.339928028092699,0.766440987203842,0.68725489096526,1.26509846009751,0,0,0,0,0.255973222308837,1.24930726552346,0.236777252044017,0.821127996921047,3.02410114837099,2.40696176205157,3.91025890483557,0,0.670700859703636,0,2.1686349143074,0,2.31754430337318,0,0,0.283604451492204,1.10864698731282,1.14185221401064,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.930705723632056,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0,0,0,0,0.488124115096339,0,0,0.267899184852239,1.12264686313085,0.337834441449967,0,0,0,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0.286836620748814,1.06400514659507,0,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0,0,0,0.624320153660641,1.1409436430889,2.24173020827702,0.117434498643765,0.161872944368132,0,0,1.35117749042945,0.309977343527296,1.18800285728205,0.741800787835671,0,0,0.505008341862199,0.375355559615893,0,1.31693286264251,0.30648779579902,0,0,0.179389635688862,0.85422955527427,0.635795703478686,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,1.85653965465393,0,1.00973509697646,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0.545492241181669,0,1.34171076742555,0.927708378250397,0.580969714347592,0.621966330092223,1.00928340350251,2.18986415445498,0,1.28648187638577,0,0.928735856063958,0,0.828147600278907,0.842923450390509,1.68707720918437,0.772057809126758,0,0.237270619111097,0.943819157121151,0.98110732562673,0,0,0,0,0,0,2.94848165003288,5.31710916013264,0.441463099414651,0.122988438543114,1.02940686179115,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23215 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24903 | |||
|TSSclassifier=S | |||
|UniProt=B4DM27 | |||
|association_with_transcript=-98bp_to_AK297263_5end | |||
|coexpression_cluster_id=C852 | |||
|description=CAGE_peak_13_at_PRRC2C_5end | |||
|id=chr1:171501820..171501834,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.38e-11!119;CL:0002031!8.89e-11!124;CL:0002032!1.22e-10!165;CL:0000837!1.22e-10!165;CL:0000860!2.64e-10!45;CL:0002057!4.64e-10!42;CL:0000738!6.65e-10!140;CL:0000037!1.54e-09!172;CL:0000566!1.54e-09!172;CL:0002194!6.32e-08!63;CL:0000576!6.32e-08!63;CL:0000040!6.32e-08!63;CL:0000559!6.32e-08!63;CL:0002009!9.37e-08!65;CL:0000988!1.05e-07!182;CL:0000839!1.86e-07!70;CL:0000557!2.60e-07!71;CL:0000766!9.67e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.33e-15;33!CL:0002057;4.33e-15;33!CL:0000473;1.53e-12;39!CL:0000234;1.53e-12;39!CL:0000576;1.53e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.07e-14,115;CL:0000473,1.40e-13,48;CL:0000234,1.40e-13,48;CL:0000860,1.54e-13,42;CL:0002057,1.54e-13,42;CL:0002031,7.93e-13,120;CL:0000738,1.78e-11,136;CL:0002032,1.92e-11,161;CL:0000837,1.92e-11,161;CL:0000037,4.64e-10,168;CL:0002009,7.11e-10,61;CL:0002194,8.91e-10,59;CL:0000576,8.91e-10,59;CL:0000040,8.91e-10,59;CL:0000559,8.91e-10,59;CL:0000557,1.58e-08,67;CL:0000988,1.69e-08,177;CL:0000839,4.03e-08,66;CL:0000766,8.31e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-10;42 | |||
|ontology_enrichment_disease=DOID:162!1.30e-09!235;DOID:14566!6.07e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.05e-07;25!UBERON:0000203;8.05e-07;25!UBERON:0002791;9.79e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.32e-08,34;UBERON:0002020,5.32e-08,34;UBERON:0001049,3.10e-07,56;UBERON:0005068,3.10e-07,56;UBERON:0006241,3.10e-07,56;UBERON:0007135,3.10e-07,56;UBERON:0002371,3.17e-07,76;UBERON:0002791,4.70e-07,32 | |||
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| |||
|short_description=p13@PRRC2C | |||
}} |
Revision as of 01:45, 12 September 2013
Short description: | p13@PRRC2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_PRRC2C_5end |
Coexpression cluster: | C852_CD14_CD4_Neutrophils_CD8_Natural_acute_neuroectodermal |
Association with transcript: | -98bp_to_AK297263_5end |
EntrezGene: | PRRC2C |
HGNC: | 24903 |
UniProt: | B4DM27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.07e-14 | 115 |
defensive cell | 1.40e-13 | 48 |
phagocyte | 1.40e-13 | 48 |
classical monocyte | 1.54e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-13 | 42 |
hematopoietic lineage restricted progenitor cell | 7.93e-13 | 120 |
leukocyte | 1.78e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.92e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-11 | 161 |
hematopoietic stem cell | 4.64e-10 | 168 |
macrophage dendritic cell progenitor | 7.11e-10 | 61 |
monopoietic cell | 8.91e-10 | 59 |
monocyte | 8.91e-10 | 59 |
monoblast | 8.91e-10 | 59 |
promonocyte | 8.91e-10 | 59 |
granulocyte monocyte progenitor cell | 1.58e-08 | 67 |
hematopoietic cell | 1.69e-08 | 177 |
myeloid lineage restricted progenitor cell | 4.03e-08 | 66 |
myeloid leukocyte | 8.31e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.32e-08 | 34 |
gray matter | 5.32e-08 | 34 |
neural tube | 3.10e-07 | 56 |
neural rod | 3.10e-07 | 56 |
future spinal cord | 3.10e-07 | 56 |
neural keel | 3.10e-07 | 56 |
bone marrow | 3.17e-07 | 76 |
regional part of telencephalon | 4.70e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.