FFCP PHASE1:Hg19::chr1:167666666..167666680,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92241|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=28310|TSSclassifier=S|UniProt=Q6JBY9|association_with_transcript=40bp_to_BC013186_5end|coexpression_cluster_id=C138|description=CAGE_peak_4_at_RCSD1_5end|id=chr1:167666666..167666680,+|ontology_enrichment_celltype=CL:0000988!1.13e-32!182;CL:0000037!1.52e-32!172;CL:0000566!1.52e-32!172;CL:0002087!4.70e-30!119;CL:0002032!1.17e-29!165;CL:0000837!1.17e-29!165;CL:0000738!1.53e-29!140;CL:0002031!3.40e-26!124;CL:0000542!5.03e-21!53;CL:0000051!5.03e-21!53;CL:0000838!5.45e-20!52;CL:0002057!5.98e-12!42;CL:0000763!3.41e-11!112;CL:0000049!3.41e-11!112;CL:0000945!5.84e-11!24;CL:0000826!5.84e-11!24;CL:0000860!9.82e-11!45;CL:0000766!2.13e-09!76;CL:0000839!4.74e-09!70;CL:0000084!4.76e-09!25;CL:0000827!4.76e-09!25;CL:0000080!5.61e-09!6;CL:0000557!8.01e-09!71;CL:0002194!2.78e-08!63;CL:0000576!2.78e-08!63;CL:0000040!2.78e-08!63;CL:0000559!2.78e-08!63;CL:0002009!7.79e-08!65;CL:0000134!3.68e-07!358;CL:0000236!5.64e-07!14;CL:0000791!6.04e-07!18;CL:0000789!6.04e-07!18;CL:0002420!6.04e-07!18;CL:0002419!6.04e-07!18;CL:0000790!6.04e-07!18|ontology_enrichment_celltype_v019=CL:0000785;2.16e-26;1!CL:0000819;2.16e-26;1!CL:0000226;1.53e-09;3!CL:0000842;1.53e-09;3!CL:0000236;1.22e-08;13|ontology_enrichment_celltype_v019_2=CL:0000819,2.16e-26,1;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0000817,1.01e-09,3;CL:0000226,1.30e-09,3;CL:0000842,1.30e-09,3;CL:0000236,4.19e-08,14|ontology_enrichment_development_v019=CL:0000954;6.43e-14;2!UBERON:0006965;1.21e-13;2|ontology_enrichment_disease=DOID:2531!2.95e-12!51;DOID:0060083!2.95e-12!51;DOID:1240!1.44e-08!39|ontology_enrichment_disease_v019=DOID:0060073;2.16e-26;1!DOID:8675;2.16e-26;1|ontology_enrichment_disease_v019_2=DOID:0060073,2.16e-26,1;DOID:8675,2.16e-26,1|ontology_enrichment_uberon=UBERON:0002390!3.03e-17!102;UBERON:0003061!3.03e-17!102;UBERON:0002193!1.24e-15!112;UBERON:0000178!6.89e-09!15;UBERON:0000179!6.89e-09!15;UBERON:0000463!6.89e-09!15;UBERON:0002371!1.05e-07!80;UBERON:0004177!1.57e-07!7;UBERON:0002405!5.25e-07!115;UBERON:0002370!6.44e-07!4;UBERON:0005058!6.44e-07!4;UBERON:0009113!6.44e-07!4;UBERON:0003295!6.44e-07!4;UBERON:0005562!6.44e-07!4|ontology_enrichment_uberon_v019=UBERON:0001723;1.53e-09;3!UBERON:0001033;1.53e-09;3!UBERON:0000178;1.37e-07;15!UBERON:0000179;1.37e-07;15!UBERON:0000463;1.37e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0000178,1.27e-07,15;UBERON:0000179,1.27e-07,15;UBERON:0000463,1.27e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0.802177789880567,0.217010870715852,0.223915474239924,0,0,0.436194716338694,0.755751887377619,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0.22465726229299,0.300353785683013,0.803627933485401,0,0.19891667719909,0.182664153764634,0,0,1.77901850772711,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.334231370655521,0,0.443067789167242,0.270803863765016,0.640456598628376,0.780356085359269,0.328875809207352,0,0.579606171470105,0.296573126324121,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.602300476311091,0,0,0,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.448340575974109,0,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,2.37937552888281,0,0,0,0.371606350251437,0.721346064882224,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0.3385835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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=92241 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28310 | |||
|TSSclassifier=S | |||
|UniProt=Q6JBY9 | |||
|association_with_transcript=40bp_to_BC013186_5end | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_4_at_RCSD1_5end | |||
|id=chr1:167666666..167666680,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.13e-32!182;CL:0000037!1.52e-32!172;CL:0000566!1.52e-32!172;CL:0002087!4.70e-30!119;CL:0002032!1.17e-29!165;CL:0000837!1.17e-29!165;CL:0000738!1.53e-29!140;CL:0002031!3.40e-26!124;CL:0000542!5.03e-21!53;CL:0000051!5.03e-21!53;CL:0000838!5.45e-20!52;CL:0002057!5.98e-12!42;CL:0000763!3.41e-11!112;CL:0000049!3.41e-11!112;CL:0000945!5.84e-11!24;CL:0000826!5.84e-11!24;CL:0000860!9.82e-11!45;CL:0000766!2.13e-09!76;CL:0000839!4.74e-09!70;CL:0000084!4.76e-09!25;CL:0000827!4.76e-09!25;CL:0000080!5.61e-09!6;CL:0000557!8.01e-09!71;CL:0002194!2.78e-08!63;CL:0000576!2.78e-08!63;CL:0000040!2.78e-08!63;CL:0000559!2.78e-08!63;CL:0002009!7.79e-08!65;CL:0000134!3.68e-07!358;CL:0000236!5.64e-07!14;CL:0000791!6.04e-07!18;CL:0000789!6.04e-07!18;CL:0002420!6.04e-07!18;CL:0002419!6.04e-07!18;CL:0000790!6.04e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.16e-26;1!CL:0000819;2.16e-26;1!CL:0000226;1.53e-09;3!CL:0000842;1.53e-09;3!CL:0000236;1.22e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.16e-26,1;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0000817,1.01e-09,3;CL:0000226,1.30e-09,3;CL:0000842,1.30e-09,3;CL:0000236,4.19e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;6.43e-14;2!UBERON:0006965;1.21e-13;2 | |||
|ontology_enrichment_disease=DOID:2531!2.95e-12!51;DOID:0060083!2.95e-12!51;DOID:1240!1.44e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.16e-26;1!DOID:8675;2.16e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.16e-26,1;DOID:8675,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.03e-17!102;UBERON:0003061!3.03e-17!102;UBERON:0002193!1.24e-15!112;UBERON:0000178!6.89e-09!15;UBERON:0000179!6.89e-09!15;UBERON:0000463!6.89e-09!15;UBERON:0002371!1.05e-07!80;UBERON:0004177!1.57e-07!7;UBERON:0002405!5.25e-07!115;UBERON:0002370!6.44e-07!4;UBERON:0005058!6.44e-07!4;UBERON:0009113!6.44e-07!4;UBERON:0003295!6.44e-07!4;UBERON:0005562!6.44e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.53e-09;3!UBERON:0001033;1.53e-09;3!UBERON:0000178;1.37e-07;15!UBERON:0000179;1.37e-07;15!UBERON:0000463;1.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0000178,1.27e-07,15;UBERON:0000179,1.27e-07,15;UBERON:0000463,1.27e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0.802177789880567,0.217010870715852,0.223915474239924,0,0,0.436194716338694,0.755751887377619,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0.22465726229299,0.300353785683013,0.803627933485401,0,0.19891667719909,0.182664153764634,0,0,1.77901850772711,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.334231370655521,0,0.443067789167242,0.270803863765016,0.640456598628376,0.780356085359269,0.328875809207352,0,0.579606171470105,0.296573126324121,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.602300476311091,0,0,0,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.448340575974109,0,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,2.37937552888281,0,0,0,0.371606350251437,0.721346064882224,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0.1605880751037,0.403599414382095,0,0,0,0,0.333698283423817,0.586164286206121,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,7.66310114705797,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.992332043623902,0.395223263795889,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.452122368852043,0.31037357147929,0,0,0,0.653150243690884,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p4@RCSD1 | |||
}} |
Revision as of 01:36, 12 September 2013
Short description: | p4@RCSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RCSD1_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 40bp_to_BC013186_5end |
EntrezGene: | RCSD1 |
HGNC: | 28310 |
UniProt: | Q6JBY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.16e-26 | 1 |
mature B cell | 6.43e-14 | 2 |
pre-B-II cell | 6.43e-14 | 2 |
transitional stage B cell | 6.43e-14 | 2 |
small pre-B-II cell | 6.43e-14 | 2 |
immature B cell | 6.43e-14 | 2 |
precursor B cell | 1.01e-09 | 3 |
single nucleate cell | 1.30e-09 | 3 |
mononuclear cell | 1.30e-09 | 3 |
B cell | 4.19e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
blood | 1.27e-07 | 15 |
haemolymphatic fluid | 1.27e-07 | 15 |
organism substance | 1.27e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.16e-26 | 1 |
lymphosarcoma | 2.16e-26 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.