FFCP PHASE1:Hg19::chr1:156933538..156933557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9826|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14580|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000486670_5end|coexpression_cluster_id=C26|description=CAGE_peak_6_at_ARHGEF11_5end|id=chr1:156933538..156933557,-|ontology_enrichment_celltype=CL:0000738!1.73e-65!140;CL:0002087!5.75e-65!119;CL:0002194!3.45e-59!63;CL:0000576!3.45e-59!63;CL:0000040!3.45e-59!63;CL:0000559!3.45e-59!63;CL:0000766!3.64e-58!76;CL:0002009!9.33e-57!65;CL:0002057!1.02e-55!42;CL:0002031!8.08e-55!124;CL:0000839!2.75e-51!70;CL:0000860!6.74e-51!45;CL:0000557!2.76e-50!71;CL:0000037!1.19e-47!172;CL:0000566!1.19e-47!172;CL:0002032!1.13e-45!165;CL:0000837!1.13e-45!165;CL:0000988!2.19e-43!182;CL:0000763!6.85e-35!112;CL:0000049!6.85e-35!112;CL:0000791!5.27e-17!18;CL:0000789!5.27e-17!18;CL:0002420!5.27e-17!18;CL:0002419!5.27e-17!18;CL:0000790!5.27e-17!18;CL:0000084!4.73e-16!25;CL:0000827!4.73e-16!25;CL:0002393!2.01e-11!9;CL:0002397!2.01e-11!9;CL:0000134!1.38e-10!358;CL:0002320!6.49e-10!365;CL:0000625!7.11e-10!11;CL:0000542!9.30e-10!53;CL:0000051!9.30e-10!53;CL:0000838!2.99e-09!52;CL:0000219!5.99e-08!390;CL:0000624!9.66e-08!6|ontology_enrichment_celltype_v019=CL:0000860;2.92e-69;33!CL:0002057;2.92e-69;33!CL:0000473;4.58e-69;39!CL:0000234;4.58e-69;39!CL:0000576;3.30e-54;48!CL:0000766;1.37e-37;69!CL:0002087;7.66e-20;104!CL:0000763;1.37e-17;100!CL:0000738;3.15e-17;136!CL:0000235;8.81e-16;6!CL:0000084;1.24e-12;25!CL:0000791;8.50e-11;18!CL:0000789;8.50e-11;18!CL:0002419;8.50e-11;18!CL:0000624;2.01e-09;6!CL:0000988;6.79e-09;177!CL:0000875;5.01e-08;3!CL:0002396;5.01e-08;3!CL:0000219;1.29e-07;193|ontology_enrichment_celltype_v019_2=CL:0000473,9.63e-102,48;CL:0000234,9.63e-102,48;CL:0002194,5.66e-95,59;CL:0000576,5.66e-95,59;CL:0000040,5.66e-95,59;CL:0000559,5.66e-95,59;CL:0002009,1.85e-91,61;CL:0000860,8.29e-87,42;CL:0002057,8.29e-87,42;CL:0000766,4.62e-86,72;CL:0000839,1.37e-83,66;CL:0000557,3.72e-82,67;CL:0002087,1.47e-71,115;CL:0002031,6.11e-68,120;CL:0000738,4.43e-65,136;CL:0000763,7.40e-53,108;CL:0000049,7.40e-53,108;CL:0002032,1.64e-52,161;CL:0000837,1.64e-52,161;CL:0000037,1.17e-49,168;CL:0000988,2.54e-46,177;CL:0000134,6.28e-16,354;CL:0000235,1.01e-15,6;CL:0002320,2.61e-15,361;CL:0000219,3.87e-13,386;CL:0000084,9.54e-13,25;CL:0000827,9.54e-13,25;CL:0002393,2.38e-12,9;CL:0002397,2.38e-12,9;CL:0000048,4.09e-11,427;CL:0000791,6.08e-11,18;CL:0000789,6.08e-11,18;CL:0002420,6.08e-11,18;CL:0002419,6.08e-11,18;CL:0000790,6.08e-11,18;CL:0000723,9.66e-11,433;CL:0000034,2.93e-10,441;CL:0000624,2.00e-09,6;CL:0000875,3.33e-08,3;CL:0002396,3.33e-08,3|ontology_enrichment_development_v019=CL:0002057;2.46e-61;42!CL:0000049;7.30e-18;108!CL:0000790;8.50e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.80e-56!102;UBERON:0003061!5.80e-56!102;UBERON:0002193!6.80e-52!112;UBERON:0002371!2.06e-42!80;UBERON:0001474!4.30e-38!86;UBERON:0002405!1.49e-35!115;UBERON:0004765!1.00e-30!101;UBERON:0001434!1.00e-30!101;UBERON:0003081!3.17e-18!216;UBERON:0002204!3.90e-14!167;UBERON:0002384!2.00e-09!375;UBERON:0000178!5.77e-09!15;UBERON:0000179!5.77e-09!15;UBERON:0000463!5.77e-09!15|ontology_enrichment_uberon_v019=UBERON:0000178;4.40e-09;15!UBERON:0000179;4.40e-09;15!UBERON:0000463;4.40e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.39e-78,98;UBERON:0003061,3.39e-78,98;UBERON:0002371,6.35e-71,76;UBERON:0002193,1.37e-69,108;UBERON:0001474,8.62e-65,82;UBERON:0002405,1.48e-60,93;UBERON:0004765,7.10e-58,90;UBERON:0001434,8.93e-51,100;UBERON:0003081,2.94e-31,203;UBERON:0002204,2.28e-26,167;UBERON:0000926,8.77e-15,315;UBERON:0004120,8.77e-15,315;UBERON:0006603,8.77e-15,315;UBERON:0002384,1.81e-14,371;UBERON:0000178,5.57e-09,15;UBERON:0000179,5.57e-09,15;UBERON:0000463,5.57e-09,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.928896739896456,0,0,0,0.309868802321207,0,0,1.10799081706375,0.601633342410425,0.651032612147555,5.37397138175818,0.971680998056939,5.15151135268373,4.07115068582781,2.64513160582167,3.15359279544161,4.41615170120801,9.86802931252382,2.78735733805593,7.48000220037591,7.94098190240212,3.31075121844019,2.06847408441971,4.51839278508678,5.41705946377367,4.51781614902251,4.36649840092553,2.9214052977861,10.1007684482398,6.41858054152187,5.75403413219137,5.27762080298746,8.37747362010854,5.11469700639233,13.0594157382863,9.07816359505824,9.9651559839292,5.52747063564835,8.86520961314342,1.73751075764093,18.1619850790011,9.57521853567668,8.22802207346299,1.69004229049553,2.12604299965044,1.67726916406701,1.90958672949042,1.05123824989054,0.803627933485401,1.99508920618874,3.18266683518544,2.73996230646951,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,1.37696839079683,1.57204305099666,1.02800749499755,3.34372990781356,1.95553359980154,0.946895611469467,0,1.11410456885174,0.294605907474837,1.10766947291811,0.8124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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14580 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000486670_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_6_at_ARHGEF11_5end | |||
|id=chr1:156933538..156933557,- | |||
|ontology_enrichment_celltype=CL:0000738!1.73e-65!140;CL:0002087!5.75e-65!119;CL:0002194!3.45e-59!63;CL:0000576!3.45e-59!63;CL:0000040!3.45e-59!63;CL:0000559!3.45e-59!63;CL:0000766!3.64e-58!76;CL:0002009!9.33e-57!65;CL:0002057!1.02e-55!42;CL:0002031!8.08e-55!124;CL:0000839!2.75e-51!70;CL:0000860!6.74e-51!45;CL:0000557!2.76e-50!71;CL:0000037!1.19e-47!172;CL:0000566!1.19e-47!172;CL:0002032!1.13e-45!165;CL:0000837!1.13e-45!165;CL:0000988!2.19e-43!182;CL:0000763!6.85e-35!112;CL:0000049!6.85e-35!112;CL:0000791!5.27e-17!18;CL:0000789!5.27e-17!18;CL:0002420!5.27e-17!18;CL:0002419!5.27e-17!18;CL:0000790!5.27e-17!18;CL:0000084!4.73e-16!25;CL:0000827!4.73e-16!25;CL:0002393!2.01e-11!9;CL:0002397!2.01e-11!9;CL:0000134!1.38e-10!358;CL:0002320!6.49e-10!365;CL:0000625!7.11e-10!11;CL:0000542!9.30e-10!53;CL:0000051!9.30e-10!53;CL:0000838!2.99e-09!52;CL:0000219!5.99e-08!390;CL:0000624!9.66e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-69;33!CL:0002057;2.92e-69;33!CL:0000473;4.58e-69;39!CL:0000234;4.58e-69;39!CL:0000576;3.30e-54;48!CL:0000766;1.37e-37;69!CL:0002087;7.66e-20;104!CL:0000763;1.37e-17;100!CL:0000738;3.15e-17;136!CL:0000235;8.81e-16;6!CL:0000084;1.24e-12;25!CL:0000791;8.50e-11;18!CL:0000789;8.50e-11;18!CL:0002419;8.50e-11;18!CL:0000624;2.01e-09;6!CL:0000988;6.79e-09;177!CL:0000875;5.01e-08;3!CL:0002396;5.01e-08;3!CL:0000219;1.29e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.63e-102,48;CL:0000234,9.63e-102,48;CL:0002194,5.66e-95,59;CL:0000576,5.66e-95,59;CL:0000040,5.66e-95,59;CL:0000559,5.66e-95,59;CL:0002009,1.85e-91,61;CL:0000860,8.29e-87,42;CL:0002057,8.29e-87,42;CL:0000766,4.62e-86,72;CL:0000839,1.37e-83,66;CL:0000557,3.72e-82,67;CL:0002087,1.47e-71,115;CL:0002031,6.11e-68,120;CL:0000738,4.43e-65,136;CL:0000763,7.40e-53,108;CL:0000049,7.40e-53,108;CL:0002032,1.64e-52,161;CL:0000837,1.64e-52,161;CL:0000037,1.17e-49,168;CL:0000988,2.54e-46,177;CL:0000134,6.28e-16,354;CL:0000235,1.01e-15,6;CL:0002320,2.61e-15,361;CL:0000219,3.87e-13,386;CL:0000084,9.54e-13,25;CL:0000827,9.54e-13,25;CL:0002393,2.38e-12,9;CL:0002397,2.38e-12,9;CL:0000048,4.09e-11,427;CL:0000791,6.08e-11,18;CL:0000789,6.08e-11,18;CL:0002420,6.08e-11,18;CL:0002419,6.08e-11,18;CL:0000790,6.08e-11,18;CL:0000723,9.66e-11,433;CL:0000034,2.93e-10,441;CL:0000624,2.00e-09,6;CL:0000875,3.33e-08,3;CL:0002396,3.33e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-61;42!CL:0000049;7.30e-18;108!CL:0000790;8.50e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.80e-56!102;UBERON:0003061!5.80e-56!102;UBERON:0002193!6.80e-52!112;UBERON:0002371!2.06e-42!80;UBERON:0001474!4.30e-38!86;UBERON:0002405!1.49e-35!115;UBERON:0004765!1.00e-30!101;UBERON:0001434!1.00e-30!101;UBERON:0003081!3.17e-18!216;UBERON:0002204!3.90e-14!167;UBERON:0002384!2.00e-09!375;UBERON:0000178!5.77e-09!15;UBERON:0000179!5.77e-09!15;UBERON:0000463!5.77e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.40e-09;15!UBERON:0000179;4.40e-09;15!UBERON:0000463;4.40e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.39e-78,98;UBERON:0003061,3.39e-78,98;UBERON:0002371,6.35e-71,76;UBERON:0002193,1.37e-69,108;UBERON:0001474,8.62e-65,82;UBERON:0002405,1.48e-60,93;UBERON:0004765,7.10e-58,90;UBERON:0001434,8.93e-51,100;UBERON:0003081,2.94e-31,203;UBERON:0002204,2.28e-26,167;UBERON:0000926,8.77e-15,315;UBERON:0004120,8.77e-15,315;UBERON:0006603,8.77e-15,315;UBERON:0002384,1.81e-14,371;UBERON:0000178,5.57e-09,15;UBERON:0000179,5.57e-09,15;UBERON:0000463,5.57e-09,15 | |||
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|short_description=p6@ARHGEF11 | |||
}} |
Revision as of 00:58, 12 September 2013
Short description: | p6@ARHGEF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ARHGEF11_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000486670_5end |
EntrezGene: | ARHGEF11 |
HGNC: | 14580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.39e-78 | 98 |
blood island | 3.39e-78 | 98 |
bone marrow | 6.35e-71 | 76 |
hemolymphoid system | 1.37e-69 | 108 |
bone element | 8.62e-65 | 82 |
immune system | 1.48e-60 | 93 |
skeletal element | 7.10e-58 | 90 |
skeletal system | 8.93e-51 | 100 |
lateral plate mesoderm | 2.94e-31 | 203 |
musculoskeletal system | 2.28e-26 | 167 |
mesoderm | 8.77e-15 | 315 |
mesoderm-derived structure | 8.77e-15 | 315 |
presumptive mesoderm | 8.77e-15 | 315 |
connective tissue | 1.81e-14 | 371 |
blood | 5.57e-09 | 15 |
haemolymphatic fluid | 5.57e-09 | 15 |
organism substance | 5.57e-09 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.