FFCP PHASE1:Hg19::chr1:155948361..155948379,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9181|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=682|TSSclassifier=S|UniProt=Q92974|association_with_transcript=-25bp_to_NM_001162383,NM_001162384,uc001fms.2,uc001fmt.2_5end|description=CAGE_peak_4_at_ARHGEF2_5end|id=chr1:155948361..155948379,-|ontology_enrichment_celltype=CL:0002078!1.66e-12!44;CL:0000115!5.41e-12!35;CL:0000763!6.71e-12!112;CL:0000049!6.71e-12!112;CL:0002032!1.53e-08!165;CL:0000837!1.53e-08!165;CL:0000988!2.18e-08!182;CL:0002139!9.62e-08!24;CL:0000037!1.30e-07!172;CL:0000566!1.30e-07!172;CL:0000766!5.47e-07!76;CL:0000839!9.33e-07!70|ontology_enrichment_celltype_v019=CL:0000115;4.70e-10;36!CL:0002078;1.14e-08;45!CL:0002139;5.37e-08;24|ontology_enrichment_celltype_v019_2=CL:0002078,1.35e-12,45;CL:0000115,4.61e-12,36;CL:0000763,5.27e-12,108;CL:0000049,5.27e-12,108;CL:0002032,1.59e-08,161;CL:0000837,1.59e-08,161;CL:0000988,2.95e-08,177;CL:0002139,9.62e-08,24;CL:0000037,1.37e-07,168;CL:0000766,4.54e-07,72;CL:0000839,7.54e-07,66|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.28e-10!112;UBERON:0002390!2.60e-08!102;UBERON:0003061!2.60e-08!102;UBERON:0003081!4.98e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.14e-10,108;UBERON:0002390,2.30e-08,98;UBERON:0003061,2.30e-08,98;UBERON:0002405,2.16e-07,93|phase1_expression=3.63356758541113,5.56661362116556,2.96004248601539,5.00366491765652,3.12872766099101,0,0,1.89515962028049,2.35067065379855,9.82935746006035,11.8626198555313,6.334799791775,6.85794143393979,1.36142988256051,2.31978163009541,1.34465029290355,1.20538905604795,1.46062018077475,3.90346239032406,7.38726348460727,11.2200380184339,7.20945859399602,3.43483184557268,5.06435372769671,4.3939923858181,7.18286014030742,5.09023654589664,6.29686250509434,1.96682138424452,0.767658796194425,3.56077083626975,2.75826367343678,7.8313538882345,8.13458822366933,3.87336002901508,4.83375390457233,2.64240395401362,4.9859586767869,6.21687787157439,2.82114131930607,7.83704159839735,7.44955431843653,7.98484259665978,7.26991193897824,5.66813915533214,6.54976965207104,6.50801303335917,7.40102198439286,9.91060386864331,4.89077066947656,5.12321413058201,3.78371567821736,8.96338769915208,9.68227025375739,4.06279459783025,7.9061782607894,4.36649840092553,5.39336362668203,7.95818120164347,10.9115869205872,12.1474053901818,3.95821560224059,4.3882004676759,3.40979800426155,17.1223450790865,16.4541715160431,27.4041789558053,4.27122730936464,7.30076085788282,3.47502151528187,8.47559303686716,13.9945501675275,10.1267963981083,3.38008458099107,1.91343869968539,2.30624510059213,3.70684482783434,4.6554836780867,4.66104201421532,2.56511469367124,2.78483348078726,3.65328307529268,7.03984977845291,4.91524750135918,2.66852776159066,3.84057200309856,6.4063357925762,1.72425731986345,5.94940385506376,6.67837628174755,3.41527781465669,2.34894875748376,1.91136614062614,1.32171328579026,3.92355994087075,2.63384084775077,3.540775862049,2.75107533924415,2.2616164889946,4.51403537554831,2.28145586643513,4.2610302516126,1.94826728407911,4.45641827540694,1.76763544484902,2.87994062958707,2.97884250141517,2.5618263945135,4.42201781703586,3.28875809207352,2.48715016007264,2.60822777161547,3.55887751588945,3.47803076516627,4.18142095219907,5.89208582027344,2.29932296161153,3.77990190030893,3.79529538029254,8.91983160107471,5.20866763085135,1.90090408889675,8.13105643019973,7.93516989157394,4.99722906209383,7.57687206540854,6.56902397536837,2.21767417547206,2.94184215361858,2.60683926989038,4.87613732627923,4.69490601792545,2.9408389224012,1.44575660953827,3.00802746381534,3.62116297402059,7.15757352345989,6.32625331393427,3.40325341790644,3.76939975686359,3.77689578480442,4.71524671791765,12.750335090239,7.41568885568859,6.16640047943898,5.57215159357655,6.38198210490553,2.38490624305342,0,2.22874500797739,9.54059555360184,8.60234595106124,5.9013885273291,6.21838736116411,8.38998872419812,6.05259692268148,8.56879362800923,5.42675194255591,6.40379272836078,7.02913286805807,14.5018554159293,5.32190474002959,13.9115372802457,7.35326160691737,8.1014194788176,6.34028070816966,7.63399866928977,6.19363142658272,13.7984973719295,5.69559395740877,6.96166626935548,17.1314542666882,11.6334079244498,9.15797509499322,2.48485975847659,1.8994576749687,3.31022952033047,3.44203944898576,1.77334191099179,2.80338800071154,9.60740961567345,3.20667812942308,1.55605517699883,3.23305612967251,3.26923806226917,5.75158225050739,5.18558332031999,5.85803579584492,2.80944069147288,5.13424639390004,2.24173020827702,4.69737994575059,3.39933183173076,3.37081936085396,3.67477508258808,3.80786383666481,2.9964476540972,7.12801714369232,5.93440630268536,7.28129089550421,7.18618141816238,4.71341119071385,4.62938523526267,4.15596173226274,7.90159717585508,6.12975591598039,4.05642759047811,3.62982986112067,6.45802688479903,1.4949017217299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002,10.0837797935496,1.60342272946051,2.27937780579341,3.58508801897295,2.76503864725637,3.01159151174194,2.24830801388074,2.8120423570522,7.19757985324579,8.93516787321795,4.6530957849648,4.77769469488717,1.34226518157351,3.14080747568778,4.26712737437943,2.58971534875158,2.87455859197492,10.4383298820438,6.31424290976881,1.87151570769685,13.3297019358117,4.63788354032517,2.71070596893504,2.52863188514487,1.20770274853339,2.9326180081019,1.96703604453562,3.76253837089218,3.18692818280077,2.35676547101626,4.3187862765288,8.91139200981258,2.113278637917,6.62715747282486,5.82700291475092,10.8933830675345,7.69546900621953,6.60649572840933,1.76447435857846,1.5245859670942,2.19100916473955,5.04602211744995,10.177110403753,6.1530909255342,4.69141282317311,9.16336449714793,3.1741610430924,2.60396512716726,3.23522940041993,5.62414530760926,3.02799419604189,6.77446546174912,5.06794004045748,3.26364255174342,1.06886962106224,2.6649520865105,8.52405633594075,2.57647573942014,0.535928260312357,0.829169439458779,8.37807266481351,4.26467963801962,2.14257988317366,5.23170169671649,5.95917257240236,6.84004361741742,5.28271413708769,4.04234377916439,3.04803447055746,3.76456631193809,8.41900662682344,6.31155407455552,6.32054677437425,5.77963207137919,2.56145630106517,0,3.59300808426348,9.38563769613817,7.33448665097199,4.88275413978886,6.65756774185513,5.83694001413976,7.37307532297436|short_description=p4@ARHGEF2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=682 | |||
|TSSclassifier=S | |||
|UniProt=Q92974 | |||
|association_with_transcript=-25bp_to_NM_001162383,NM_001162384,uc001fms.2,uc001fmt.2_5end | |||
|description=CAGE_peak_4_at_ARHGEF2_5end | |||
|id=chr1:155948361..155948379,- | |||
|ontology_enrichment_celltype=CL:0002078!1.66e-12!44;CL:0000115!5.41e-12!35;CL:0000763!6.71e-12!112;CL:0000049!6.71e-12!112;CL:0002032!1.53e-08!165;CL:0000837!1.53e-08!165;CL:0000988!2.18e-08!182;CL:0002139!9.62e-08!24;CL:0000037!1.30e-07!172;CL:0000566!1.30e-07!172;CL:0000766!5.47e-07!76;CL:0000839!9.33e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.70e-10;36!CL:0002078;1.14e-08;45!CL:0002139;5.37e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,1.35e-12,45;CL:0000115,4.61e-12,36;CL:0000763,5.27e-12,108;CL:0000049,5.27e-12,108;CL:0002032,1.59e-08,161;CL:0000837,1.59e-08,161;CL:0000988,2.95e-08,177;CL:0002139,9.62e-08,24;CL:0000037,1.37e-07,168;CL:0000766,4.54e-07,72;CL:0000839,7.54e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.28e-10!112;UBERON:0002390!2.60e-08!102;UBERON:0003061!2.60e-08!102;UBERON:0003081!4.98e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.14e-10,108;UBERON:0002390,2.30e-08,98;UBERON:0003061,2.30e-08,98;UBERON:0002405,2.16e-07,93 | |||
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| |||
|short_description=p4@ARHGEF2 | |||
}} |
Revision as of 00:48, 12 September 2013
Short description: | p4@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ARHGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NM_001162383, NM_001162384, uc001fms.2, uc001fmt.2_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | Q92974 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.35e-12 | 45 |
endothelial cell | 4.61e-12 | 36 |
myeloid cell | 5.27e-12 | 108 |
common myeloid progenitor | 5.27e-12 | 108 |
hematopoietic oligopotent progenitor cell | 1.59e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-08 | 161 |
hematopoietic cell | 2.95e-08 | 177 |
endothelial cell of vascular tree | 9.62e-08 | 24 |
hematopoietic stem cell | 1.37e-07 | 168 |
myeloid leukocyte | 4.54e-07 | 72 |
myeloid lineage restricted progenitor cell | 7.54e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.14e-10 | 108 |
hematopoietic system | 2.30e-08 | 98 |
blood island | 2.30e-08 | 98 |
immune system | 2.16e-07 | 93 |
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