FFCP PHASE1:Hg19::chr1:153651267..153651278,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4881|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7943|TSSclassifier=S|UniProt=P16066|association_with_transcript=103bp_to_NM_000906,uc001fcs.3_5end|coexpression_cluster_id=C1838|description=CAGE_peak_6_at_NPR1_5end|id=chr1:153651267..153651278,+|ontology_enrichment_celltype=CL:0000136!8.95e-13!15|ontology_enrichment_celltype_v019=CL:0000136;2.52e-22;13!CL:0002615;1.10e-09;3!CL:0002617;3.98e-07;2|ontology_enrichment_celltype_v019_2=CL:0000136,7.78e-19,15;CL:0002615,1.81e-09,3;CL:0002617,4.84e-07,2|ontology_enrichment_development_v019=UBERON:0006965;2.95e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.24e-17!115;UBERON:0001737!5.07e-09!9;UBERON:0007100!8.84e-09!27;UBERON:0000948!6.44e-08!24;UBERON:0005498!6.44e-08!24;UBERON:0004140!6.44e-08!24;UBERON:0009881!6.44e-08!24;UBERON:0004141!6.44e-08!24;UBERON:0003084!6.44e-08!24;UBERON:0007005!6.44e-08!24;UBERON:0004139!6.44e-08!24;UBERON:0004291!6.44e-08!24;UBERON:0001557!1.33e-07!19;UBERON:0003688!2.79e-07!6;UBERON:0002358!2.79e-07!6;UBERON:0003684!2.79e-07!6;UBERON:0001178!2.79e-07!6|ontology_enrichment_uberon_v019=UBERON:0003688;2.33e-08;6!UBERON:0002358;2.33e-08;6!UBERON:0003684;2.33e-08;6!UBERON:0001178;2.33e-08;6!UBERON:0007100;1.77e-07;25!UBERON:0000948;6.05e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.54e-13,114;UBERON:0003688,3.20e-08,6;UBERON:0002358,3.20e-08,6;UBERON:0003684,3.20e-08,6;UBERON:0001178,3.20e-08,6;UBERON:0009569,8.02e-07,112;UBERON:0007100,8.33e-07,27|phase1_expression=4.36028110249336,2.14100523890983,5.63817616383885,1.0007329835313,5.81049422755474,0.872338524100369,0,0,7.31319758959548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.02290049474824,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,1.21890816109487,0.398873881556595,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0.892997282840798,0.673588117878509,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,1.8672662123986,0.404132016209064,3.59616186849609,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,1.30137480043828,0.842923450390509,1.68707720918437,0.661763836394364,1.08939722046203,1.42362371466658,0.404493924480493,0.196221465125346,0.38474715694639,2.95262181849859,0,2.057870056657,1.47008711385542,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,6.53509661204075,0.511707249066704,0.160853921143607,2.96836132889982,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.541892875087706,2.50844886927427,0,0,0,0,0.261435451024901,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,4.10222901961303,0,0,0,0,0,0,0,0,0,0,0,10.9586393538088,0.828851746593443,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0.0927680981618513,0,0,0,10.1499940560871,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,1.15425387755696,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0.884575645033392,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,1.18375320854817,2.41981432097328,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,1.7472666824203,0,1.83837029449262,1.0232504392066,1.64230914106418,1.06687918137261,12.6206261168845,0,0,0,0,0,0.160317640503067,1.70762395791482,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,2.23425921017803,1.83328339209347,0.717873024576814,0,1.28767814440971,0.446342914883745,0.873385142327441,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,3.15222829196793,3.88163952198986,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0,0,0,1.17466153824464,1.10043013569766,6.21358583020793,1.48849806543585,0,0,0,7.61624924717264,8.0220766087264,7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7943 | |||
|TSSclassifier=S | |||
|UniProt=P16066 | |||
|association_with_transcript=103bp_to_NM_000906,uc001fcs.3_5end | |||
|coexpression_cluster_id=C1838 | |||
|description=CAGE_peak_6_at_NPR1_5end | |||
|id=chr1:153651267..153651278,+ | |||
|ontology_enrichment_celltype=CL:0000136!8.95e-13!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.52e-22;13!CL:0002615;1.10e-09;3!CL:0002617;3.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.78e-19,15;CL:0002615,1.81e-09,3;CL:0002617,4.84e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.95e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.24e-17!115;UBERON:0001737!5.07e-09!9;UBERON:0007100!8.84e-09!27;UBERON:0000948!6.44e-08!24;UBERON:0005498!6.44e-08!24;UBERON:0004140!6.44e-08!24;UBERON:0009881!6.44e-08!24;UBERON:0004141!6.44e-08!24;UBERON:0003084!6.44e-08!24;UBERON:0007005!6.44e-08!24;UBERON:0004139!6.44e-08!24;UBERON:0004291!6.44e-08!24;UBERON:0001557!1.33e-07!19;UBERON:0003688!2.79e-07!6;UBERON:0002358!2.79e-07!6;UBERON:0003684!2.79e-07!6;UBERON:0001178!2.79e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.33e-08;6!UBERON:0002358;2.33e-08;6!UBERON:0003684;2.33e-08;6!UBERON:0001178;2.33e-08;6!UBERON:0007100;1.77e-07;25!UBERON:0000948;6.05e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.54e-13,114;UBERON:0003688,3.20e-08,6;UBERON:0002358,3.20e-08,6;UBERON:0003684,3.20e-08,6;UBERON:0001178,3.20e-08,6;UBERON:0009569,8.02e-07,112;UBERON:0007100,8.33e-07,27 | |||
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|short_description=p6@NPR1 | |||
}} |
Revision as of 00:34, 12 September 2013
Short description: | p6@NPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NPR1_5end |
Coexpression cluster: | C1838_breast_aorta_extraskeletal_mature_Adipocyte_lung_Hepatic |
Association with transcript: | 103bp_to_NM_000906, uc001fcs.3_5end |
EntrezGene: | NPR1 |
HGNC: | 7943 |
UniProt: | P16066 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.78e-19 | 15 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
adipocyte of breast | 4.84e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.54e-13 | 114 |
omentum | 3.20e-08 | 6 |
peritoneum | 3.20e-08 | 6 |
abdominal cavity | 3.20e-08 | 6 |
visceral peritoneum | 3.20e-08 | 6 |
subdivision of trunk | 8.02e-07 | 112 |
primary circulatory organ | 8.33e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.