FFCP PHASE1:Hg19::chr1:153518270..153518290,-: Difference between revisions
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{{FFCP | 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23.1143796488764,0,0,1.58694147858591,1.15761237161917,0.244736704506468,3.04451029838529,87.3908095465551,1.97355644620836,0.353378291891762,0,192.256497463197,9.73717770634198,335.067431479263,0,5.11556213761404,33.126252502696,39.4608575730688,144.918939310678,1.31043939538565,16.9583307040066,169.049698686902,559.364746206239,205.274887931527,11.3661886576138,13.0528669320372,309.113890472841,1.11903606175556,120.682988446397,0,10.7824811396682,0.157265941855896,0,4.58277830875868,0.425149840203366,0.371807292777007,2.79322458986622,117.979614092418,3.23333154505139,23.2165517002786,137.896293983057,90.3424158191941,1.86264752779733,2.8339315265117,9.89729926154338,3.89721092057435,0.504143392443436,1.45230230174858,6.29755017964219,7.13847101295772,0.196295437002051,0.353909170043221,0,0,203.658038979467,0,526.531239941779,30.3849726530999,1.81534561833168,10.9411961572633,0.785720083444267,2.78412259767164,7.68851648328635,1.2156765231311,0,4.13373593002368,1.77564268542939,1.09394961803644,50.4397145508608,251.579067443372,0,0.255524855279191,13.3925458969572,4.37168838884471,3.03482802118316,3.18727067891817,105.378415753215,17.9765020587016,8.74588848130834,2.24300118823545,1.97318320688547,2.71845834033127,8.23112374001312,130.063054853302,1.72827148907602,10.9306143692378,24.6552854537564,0.863710364874486,0,50.8198229096027,0,0.116241425368125,60.6765370336002,56.1197955311177,1.03608082081518,6.828739083758,13.8251932362818,30.5461424762397,0,0.170426809518315,30.9072546639378,5.0403511079691,1291.69938990623,1495.41843949968,28.7468459720326,10.6983754640615,150.568637353103,22.6600093015763,63.0349634097357,164.693649250024,143.770453945505,0,0,0,0.11294608203896,0.329821550236287,0,40.9794779553186,6.77534637562268,515.467756812229,97.3238837363005,1.17838273550813,19.0419213101497,24.3578048268211,22.4007535619202,57.7752189938577,126.126417928964,48.5367896441036,24.6854655134574,0.178553938605658,0,0.160482733378337,13.8763913766838,50.918950457904,24.5110687188982,0.788857810965923,2.99162556840025,1.30905207102113,23.2771809826776,732.458190770333,954.85484875251,863.955244561207,65.7327073390761,1.42045243552804,5.19463854146892,1.52983244612973,0.534434810531121,3.58390108185895,0,61.5323029532104,12.058385857028,4.1458471972939,13.7565884496321,204.704622624942,53.5644970793416,15.5013383606415,18.1878912886864,247.811416303156,35.9606444271632,44.8700159487247,143.257620116201,193.361815113184,60.6841997661434,71.0049833387496,71.1893163008469,0.569822880276821,3.30854772220918,480.749982894481,93.2385597866372,93.8563769613817,73.5893493980856,34.5861751568378,155.121328385224,127.808858930302,13.4638766767358|short_description=p1@S100A4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6275 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10494 | |||
|TSSclassifier=W | |||
|UniProt=P26447,F5H3J5 | |||
|association_with_transcript=0bp_to_ENST00000354332,ENST00000468373,ENST00000545360,NM_002961,NM_019554,uc001fby.2,uc001fbz.2_5end | |||
|description=CAGE_peak_1_at_S100A4_5end | |||
|id=chr1:153518270..153518290,- | |||
|ontology_enrichment_celltype=CL:0002320!1.25e-38!365;CL:0000134!2.21e-37!358;CL:0000738!3.48e-32!140;CL:0000037!8.95e-32!172;CL:0000566!8.95e-32!172;CL:0000766!1.45e-31!76;CL:0002032!9.40e-31!165;CL:0000837!9.40e-31!165;CL:0000988!5.30e-30!182;CL:0000048!1.42e-29!430;CL:0000763!5.78e-29!112;CL:0000049!5.78e-29!112;CL:0000557!7.30e-29!71;CL:0002031!7.61e-28!124;CL:0000723!8.26e-28!436;CL:0000839!1.24e-27!70;CL:0002009!1.47e-27!65;CL:0000034!1.90e-27!444;CL:0002087!1.91e-26!119;CL:0002194!2.13e-26!63;CL:0000576!2.13e-26!63;CL:0000040!2.13e-26!63;CL:0000559!2.13e-26!63;CL:0000219!3.29e-26!390;CL:0000860!8.00e-25!45;CL:0002057!7.77e-24!42;CL:0002371!1.58e-07!591;CL:0000791!7.47e-07!18;CL:0000789!7.47e-07!18;CL:0002420!7.47e-07!18;CL:0002419!7.47e-07!18;CL:0000790!7.47e-07!18;CL:0002393!7.73e-07!9;CL:0002397!7.73e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.22e-17;33!CL:0002057;8.22e-17;33!CL:0000473;2.40e-16;39!CL:0000234;2.40e-16;39!CL:0000576;7.20e-16;48!CL:0000766;4.17e-14;69!CL:0000763;1.97e-09;100!CL:0002087;5.47e-08;104!CL:0000738;1.65e-07;136!CL:0000791;7.24e-07;18!CL:0000789;7.24e-07;18!CL:0002419;7.24e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.03e-37,361;CL:0000134,1.73e-36,354;CL:0000738,1.05e-31,136;CL:0000766,1.68e-31,72;CL:0000037,3.73e-31,168;CL:0002032,3.82e-30,161;CL:0000837,3.82e-30,161;CL:0000988,6.65e-30,177;CL:0000557,8.63e-29,67;CL:0000763,1.59e-28,108;CL:0000049,1.59e-28,108;CL:0000048,1.89e-28,427;CL:0000839,1.53e-27,66;CL:0002009,1.57e-27,61;CL:0002031,2.20e-27,120;CL:0000723,1.05e-26,433;CL:0000473,1.85e-26,48;CL:0000234,1.85e-26,48;CL:0002194,2.32e-26,59;CL:0000576,2.32e-26,59;CL:0000040,2.32e-26,59;CL:0000559,2.32e-26,59;CL:0000034,2.41e-26,441;CL:0002087,5.46e-26,115;CL:0000219,1.44e-25,386;CL:0000860,6.93e-24,42;CL:0002057,6.93e-24,42;CL:0000791,7.27e-07,18;CL:0000789,7.27e-07,18;CL:0002420,7.27e-07,18;CL:0002419,7.27e-07,18;CL:0000790,7.27e-07,18;CL:0002393,7.52e-07,9;CL:0002397,7.52e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-17;42!CL:0000049;2.00e-08;108!CL:0000790;7.24e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@S100A4 | |||
}} |
Revision as of 00:30, 12 September 2013
Short description: | p1@S100A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_S100A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354332, ENST00000468373, ENST00000545360, NM_002961, NM_019554, uc001fby.2, uc001fbz.2_5end |
EntrezGene: | S100A4 |
HGNC: | 10494 |
UniProt: | P26447F5H3J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.92e-35 | 371 |
hematopoietic system | 5.95e-30 | 98 |
blood island | 5.95e-30 | 98 |
bone marrow | 2.21e-26 | 76 |
hemolymphoid system | 1.20e-24 | 108 |
bone element | 1.83e-24 | 82 |
skeletal system | 3.36e-24 | 100 |
skeletal element | 5.05e-23 | 90 |
immune system | 3.13e-20 | 93 |
musculoskeletal system | 1.85e-17 | 167 |
lateral plate mesoderm | 1.36e-11 | 203 |
mesoderm | 9.43e-09 | 315 |
mesoderm-derived structure | 9.43e-09 | 315 |
presumptive mesoderm | 9.43e-09 | 315 |
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