FFCP PHASE1:Hg19::chr1:116311367..116311382,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=845|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1513|TSSclassifier=S|UniProt=O14958|association_with_transcript=19bp_to_ENST00000261448_5end|coexpression_cluster_id=C20|description=CAGE_peak_3_at_CASQ2_5end|id=chr1:116311367..116311382,-|ontology_enrichment_celltype=CL:0000188!3.73e-09!9|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006603;4.55e-14;65!UBERON:0005062;4.02e-09;4!UBERON:0007284;4.02e-09;4!UBERON:0006965;5.38e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;7.38e-09;2|ontology_enrichment_disease_v019_2=DOID:114,7.38e-09,2|ontology_enrichment_uberon=UBERON:0007023!1.63e-72!115;UBERON:0001049!2.39e-13!57;UBERON:0005068!2.39e-13!57;UBERON:0006241!2.39e-13!57;UBERON:0007135!2.39e-13!57;UBERON:0003075!5.05e-13!86;UBERON:0007284!5.05e-13!86;UBERON:0002346!4.77e-12!90;UBERON:0005743!1.21e-10!86;UBERON:0001017!1.59e-10!82;UBERON:0002616!1.83e-10!59;UBERON:0000481!7.80e-10!347;UBERON:0000955!1.12e-09!69;UBERON:0006238!1.12e-09!69;UBERON:0003080!2.73e-09!42;UBERON:0000073!6.62e-09!94;UBERON:0001016!6.62e-09!94;UBERON:0000153!7.15e-09!129;UBERON:0007811!7.15e-09!129;UBERON:0001893!1.32e-08!34;UBERON:0002780!2.02e-08!41;UBERON:0001890!2.02e-08!41;UBERON:0006240!2.02e-08!41;UBERON:0002791!8.31e-08!33;UBERON:0000033!1.31e-07!123;UBERON:0000468!1.40e-07!659;UBERON:0002020!2.27e-07!34;UBERON:0003528!2.27e-07!34;UBERON:0002619!3.93e-07!22;UBERON:0000483!4.04e-07!309;UBERON:0004151!4.21e-07!3;UBERON:0001869!4.70e-07!32;UBERON:0000475!4.81e-07!365;UBERON:0003978!5.10e-07!3;UBERON:0009751!5.10e-07!3;UBERON:0000946!5.10e-07!3;UBERON:0002523!5.10e-07!3;UBERON:0005983!5.10e-07!3;UBERON:0002165!5.10e-07!3;UBERON:0002062!5.10e-07!3;UBERON:0007280!5.10e-07!3;UBERON:0000119!6.51e-07!312;UBERON:0004121!8.65e-07!169;UBERON:0000467!9.00e-07!625|ontology_enrichment_uberon_v019=UBERON:0001134;4.38e-13;16!UBERON:0002036;4.38e-13;16!UBERON:0004151;3.35e-12;3!UBERON:0003978;4.93e-12;3!UBERON:0000946;4.93e-12;3!UBERON:0007100;7.09e-11;25!UBERON:0002385;1.96e-09;31!UBERON:0001015;1.96e-09;31!UBERON:0000383;1.96e-09;31!UBERON:0007023;1.09e-08;114!UBERON:0002081;1.34e-08;2!UBERON:0002133;1.90e-08;2!UBERON:0005090;2.08e-08;2!UBERON:0001630;2.08e-08;2!UBERON:0000341;2.78e-08;2!UBERON:0003127;6.53e-08;2!UBERON:0002360;9.93e-08;2!UBERON:0000094;9.93e-08;2!UBERON:0010743;9.93e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.43e-38,114;UBERON:0004151,3.48e-12,3;UBERON:0003978,5.02e-12,3;UBERON:0009751,5.02e-12,3;UBERON:0000946,5.02e-12,3;UBERON:0002523,5.02e-12,3;UBERON:0005983,5.02e-12,3;UBERON:0002165,5.02e-12,3;UBERON:0002062,5.02e-12,3;UBERON:0007280,5.02e-12,3;UBERON:0007100,6.20e-10,27;UBERON:0003103,7.96e-09,68;UBERON:0002081,1.39e-08,2;UBERON:0010227,1.39e-08,2;UBERON:0002133,1.93e-08,2;UBERON:0005090,2.08e-08,2;UBERON:0001630,2.08e-08,2;UBERON:0000341,2.78e-08,2;UBERON:0003127,5.88e-08,2;UBERON:0002360,8.64e-08,2;UBERON:0000094,8.64e-08,2;UBERON:0010743,8.64e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.870036464629098,0.616194468458578,0.921022048356777,1.92971201478343,0,1.30515024522806,2.13066568540252,47.6321390710045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68826173670061,0,0,0,0,0,0,0,0,0,0,0,9.36465544780028,2.21027132424918,0,0,0,0,0,0,0,35.4129826236592,0,0,0.969332746095218,0.834912883456661,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,2.63262476584767,0,0,4.69396576873162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,5.92665682172372,0.611030144933625,0,0,0,0.741412462787447,13.6438200040794,0,0,0,0,0,1.20990716048664,0,2.96976924253893,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,12.7055611599829,0,3.61569185248852,0,0,0.633107959558787,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,32.6760409488537,63.019116603213,9.332349319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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |||
|TSSclassifier=S | |||
|UniProt=O14958 | |||
|association_with_transcript=19bp_to_ENST00000261448_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_CASQ2_5end | |||
|id=chr1:116311367..116311382,- | |||
|ontology_enrichment_celltype=CL:0000188!3.73e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.55e-14;65!UBERON:0005062;4.02e-09;4!UBERON:0007284;4.02e-09;4!UBERON:0006965;5.38e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.38e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.63e-72!115;UBERON:0001049!2.39e-13!57;UBERON:0005068!2.39e-13!57;UBERON:0006241!2.39e-13!57;UBERON:0007135!2.39e-13!57;UBERON:0003075!5.05e-13!86;UBERON:0007284!5.05e-13!86;UBERON:0002346!4.77e-12!90;UBERON:0005743!1.21e-10!86;UBERON:0001017!1.59e-10!82;UBERON:0002616!1.83e-10!59;UBERON:0000481!7.80e-10!347;UBERON:0000955!1.12e-09!69;UBERON:0006238!1.12e-09!69;UBERON:0003080!2.73e-09!42;UBERON:0000073!6.62e-09!94;UBERON:0001016!6.62e-09!94;UBERON:0000153!7.15e-09!129;UBERON:0007811!7.15e-09!129;UBERON:0001893!1.32e-08!34;UBERON:0002780!2.02e-08!41;UBERON:0001890!2.02e-08!41;UBERON:0006240!2.02e-08!41;UBERON:0002791!8.31e-08!33;UBERON:0000033!1.31e-07!123;UBERON:0000468!1.40e-07!659;UBERON:0002020!2.27e-07!34;UBERON:0003528!2.27e-07!34;UBERON:0002619!3.93e-07!22;UBERON:0000483!4.04e-07!309;UBERON:0004151!4.21e-07!3;UBERON:0001869!4.70e-07!32;UBERON:0000475!4.81e-07!365;UBERON:0003978!5.10e-07!3;UBERON:0009751!5.10e-07!3;UBERON:0000946!5.10e-07!3;UBERON:0002523!5.10e-07!3;UBERON:0005983!5.10e-07!3;UBERON:0002165!5.10e-07!3;UBERON:0002062!5.10e-07!3;UBERON:0007280!5.10e-07!3;UBERON:0000119!6.51e-07!312;UBERON:0004121!8.65e-07!169;UBERON:0000467!9.00e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.38e-13;16!UBERON:0002036;4.38e-13;16!UBERON:0004151;3.35e-12;3!UBERON:0003978;4.93e-12;3!UBERON:0000946;4.93e-12;3!UBERON:0007100;7.09e-11;25!UBERON:0002385;1.96e-09;31!UBERON:0001015;1.96e-09;31!UBERON:0000383;1.96e-09;31!UBERON:0007023;1.09e-08;114!UBERON:0002081;1.34e-08;2!UBERON:0002133;1.90e-08;2!UBERON:0005090;2.08e-08;2!UBERON:0001630;2.08e-08;2!UBERON:0000341;2.78e-08;2!UBERON:0003127;6.53e-08;2!UBERON:0002360;9.93e-08;2!UBERON:0000094;9.93e-08;2!UBERON:0010743;9.93e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.43e-38,114;UBERON:0004151,3.48e-12,3;UBERON:0003978,5.02e-12,3;UBERON:0009751,5.02e-12,3;UBERON:0000946,5.02e-12,3;UBERON:0002523,5.02e-12,3;UBERON:0005983,5.02e-12,3;UBERON:0002165,5.02e-12,3;UBERON:0002062,5.02e-12,3;UBERON:0007280,5.02e-12,3;UBERON:0007100,6.20e-10,27;UBERON:0003103,7.96e-09,68;UBERON:0002081,1.39e-08,2;UBERON:0010227,1.39e-08,2;UBERON:0002133,1.93e-08,2;UBERON:0005090,2.08e-08,2;UBERON:0001630,2.08e-08,2;UBERON:0000341,2.78e-08,2;UBERON:0003127,5.88e-08,2;UBERON:0002360,8.64e-08,2;UBERON:0000094,8.64e-08,2;UBERON:0010743,8.64e-08,2 | |||
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|short_description=p3@CASQ2 | |||
}} |
Revision as of 23:41, 11 September 2013
Short description: | p3@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CASQ2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 19bp_to_ENST00000261448_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | O14958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.43e-38 | 114 |
cardiac chamber | 3.48e-12 | 3 |
valve | 5.02e-12 | 3 |
cardiac mesenchyme | 5.02e-12 | 3 |
cardial valve | 5.02e-12 | 3 |
tunica intima | 5.02e-12 | 3 |
heart layer | 5.02e-12 | 3 |
endocardium | 5.02e-12 | 3 |
endocardial cushion | 5.02e-12 | 3 |
presumptive endocardium | 5.02e-12 | 3 |
primary circulatory organ | 6.20e-10 | 27 |
compound organ | 7.96e-09 | 68 |
cardiac atrium | 1.39e-08 | 2 |
future cardiac atrium | 1.39e-08 | 2 |
atrioventricular valve | 1.93e-08 | 2 |
muscle structure | 2.08e-08 | 2 |
muscle organ | 2.08e-08 | 2 |
throat | 2.78e-08 | 2 |
open tracheal system trachea | 5.88e-08 | 2 |
meninx | 8.64e-08 | 2 |
membrane organ | 8.64e-08 | 2 |
meningeal cluster | 8.64e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.38e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.