FFCP PHASE1:Hg19::chr1:100316170..100316212,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=178|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=321|TSSclassifier=S|UniProt=P35573|association_with_transcript=125bp_to_ENST00000294724,ENST00000370163,ENST00000370165,NM_000028,NM_000643,NM_000644,uc001dsj.1,uc001dsk.1,uc001dsl.1_5end|description=CAGE_peak_3_at_AGL_5end|id=chr1:100316170..100316212,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;6.52e-07;3!CL:0002580;6.52e-07;3|ontology_enrichment_celltype_v019_2=CL:0002615,6.14e-07,3;CL:0002580,6.33e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.16e-25!115;UBERON:0003688!9.74e-09!6;UBERON:0002358!9.74e-09!6;UBERON:0003684!9.74e-09!6;UBERON:0001178!9.74e-09!6|ontology_enrichment_uberon_v019=UBERON:0000341;7.76e-11;2!UBERON:0005090;7.76e-11;2!UBERON:0001630;7.76e-11;2!UBERON:0001905;8.14e-11;2!UBERON:0002757;8.14e-11;2!UBERON:0010134;8.14e-11;2!UBERON:0005408;8.14e-11;2!UBERON:0001899;8.14e-11;2!UBERON:0001723;1.34e-07;3!UBERON:0001033;1.34e-07;3!UBERON:0001134;1.83e-07;16!UBERON:0002036;1.83e-07;16!UBERON:0003688;2.37e-07;6!UBERON:0002358;2.37e-07;6!UBERON:0003684;2.37e-07;6!UBERON:0001178;2.37e-07;6!UBERON:0003978;5.78e-07;3!UBERON:0000946;5.78e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000341,7.77e-11,2;UBERON:0005090,7.77e-11,2;UBERON:0001630,7.77e-11,2;UBERON:0001905,8.15e-11,2;UBERON:0002757,8.15e-11,2;UBERON:0010134,8.15e-11,2;UBERON:0005408,8.15e-11,2;UBERON:0001899,8.15e-11,2;UBERON:0007023,5.54e-09,114;UBERON:0001723,1.34e-07,3;UBERON:0001033,1.34e-07,3;UBERON:0010056,1.34e-07,3;UBERON:0003688,2.32e-07,6;UBERON:0002358,2.32e-07,6;UBERON:0003684,2.32e-07,6;UBERON:0001178,2.32e-07,6;UBERON:0003978,5.61e-07,3;UBERON:0009751,5.61e-07,3;UBERON:0000946,5.61e-07,3;UBERON:0002523,5.61e-07,3;UBERON:0005983,5.61e-07,3;UBERON:0002165,5.61e-07,3;UBERON:0002062,5.61e-07,3;UBERON:0007280,5.61e-07,3;UBERON:0004151,9.07e-07,3|phase1_expression=0.54503513781167,0.642301571672949,1.69145284915165,3.00219895059391,0.446961094427288,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0.929551542956147,0,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.48864684691266,3.37616341233737,0.280660094433074,0.896974044789907,3.07024349440022,0.482561763430822,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0.193341436584244,0,0.460511024178389,0.275673144969061,0,0.290033387828457,0.767039646744908,15.3135101312388,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.552567831062295,0,0.20453736500431,0.123084805461069,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0,0.189753732724185,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,77.0474541406837,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,4.55848377495571,0,3.38971111170799,0,0,0.316553979779393,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,2.06244381610515,0,0.798716001995964,0.429226048136571,2.00854311697685,13.6382449148054,0,0,0,0,0.13480708770837,0,0.0846733320657845,0,0,0.160753148465019,0,0.83088067605837,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,1.42939065274673,1.98627591109629,0,0,0.864221491201268,0,0,0.082092520749339,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.612691153526923,1.31149052283922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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=321 | |||
|TSSclassifier=S | |||
|UniProt=P35573 | |||
|association_with_transcript=125bp_to_ENST00000294724,ENST00000370163,ENST00000370165,NM_000028,NM_000643,NM_000644,uc001dsj.1,uc001dsk.1,uc001dsl.1_5end | |||
|description=CAGE_peak_3_at_AGL_5end | |||
|id=chr1:100316170..100316212,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;6.52e-07;3!CL:0002580;6.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.14e-07,3;CL:0002580,6.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.16e-25!115;UBERON:0003688!9.74e-09!6;UBERON:0002358!9.74e-09!6;UBERON:0003684!9.74e-09!6;UBERON:0001178!9.74e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;7.76e-11;2!UBERON:0005090;7.76e-11;2!UBERON:0001630;7.76e-11;2!UBERON:0001905;8.14e-11;2!UBERON:0002757;8.14e-11;2!UBERON:0010134;8.14e-11;2!UBERON:0005408;8.14e-11;2!UBERON:0001899;8.14e-11;2!UBERON:0001723;1.34e-07;3!UBERON:0001033;1.34e-07;3!UBERON:0001134;1.83e-07;16!UBERON:0002036;1.83e-07;16!UBERON:0003688;2.37e-07;6!UBERON:0002358;2.37e-07;6!UBERON:0003684;2.37e-07;6!UBERON:0001178;2.37e-07;6!UBERON:0003978;5.78e-07;3!UBERON:0000946;5.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,7.77e-11,2;UBERON:0005090,7.77e-11,2;UBERON:0001630,7.77e-11,2;UBERON:0001905,8.15e-11,2;UBERON:0002757,8.15e-11,2;UBERON:0010134,8.15e-11,2;UBERON:0005408,8.15e-11,2;UBERON:0001899,8.15e-11,2;UBERON:0007023,5.54e-09,114;UBERON:0001723,1.34e-07,3;UBERON:0001033,1.34e-07,3;UBERON:0010056,1.34e-07,3;UBERON:0003688,2.32e-07,6;UBERON:0002358,2.32e-07,6;UBERON:0003684,2.32e-07,6;UBERON:0001178,2.32e-07,6;UBERON:0003978,5.61e-07,3;UBERON:0009751,5.61e-07,3;UBERON:0000946,5.61e-07,3;UBERON:0002523,5.61e-07,3;UBERON:0005983,5.61e-07,3;UBERON:0002165,5.61e-07,3;UBERON:0002062,5.61e-07,3;UBERON:0007280,5.61e-07,3;UBERON:0004151,9.07e-07,3 | |||
|phase1_expression=0.54503513781167,0.642301571672949,1.69145284915165,3.00219895059391,0.446961094427288,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0.929551542956147,0,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.48864684691266,3.37616341233737,0.280660094433074,0.896974044789907,3.07024349440022,0.482561763430822,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0.193341436584244,0,0.460511024178389,0.275673144969061,0,0.290033387828457,0.767039646744908,15.3135101312388,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.552567831062295,0,0.20453736500431,0.123084805461069,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0,0.189753732724185,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,77.0474541406837,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,4.55848377495571,0,3.38971111170799,0,0,0.316553979779393,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,2.06244381610515,0,0.798716001995964,0.429226048136571,2.00854311697685,13.6382449148054,0,0,0,0,0.13480708770837,0,0.0846733320657845,0,0,0.160753148465019,0,0.83088067605837,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,1.42939065274673,1.98627591109629,0,0,0.864221491201268,0,0,0.082092520749339,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.612691153526923,1.31149052283922,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.124192805882767,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0.678930119816101,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.504143392443436,0,0.322951291263702,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.64477330057155,48.1324843037615,0.175871244359621,0,41.7847431985064,68.9381630548589,0.606965604236632,0,0.266107110487916,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.571812353413251,0.94808167039636,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.7880167428374,91.9858749431973,122.940329721849,21.8569946876613,0,0,0,0,140.064218333677,0,0,0,0,0.490296643507811,0,0.196308467114945,0,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,1.85751472338282,5.57473404450323,0.305966489225945,0,0.18378979906969,2.25636785363138,0.151557396436479,0,0,0,49.8967517648295,55.2309480995878,0,0.0620747142958579,0,1.33659032384146,3.43599221228973,76.4185785118334,99.2476573147315,2.42467390852515,0.932388670104793,8.98182962674236,0,0,0,0,4.69281884806909,0.122241444182866,0,0,1.61019034872821,0 | |||
|short_description=p3@AGL | |||
}} |
Revision as of 23:07, 11 September 2013
Short description: | p3@AGL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AGL_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_ENST00000294724, ENST00000370163, ENST00000370165, NM_000028, NM_000643, NM_000644, uc001dsj.1, uc001dsk.1, uc001dsl.1_5end |
EntrezGene: | AGL |
HGNC: | 321 |
UniProt: | P35573 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.14e-07 | 3 |
preadipocyte of the breast | 6.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 7.77e-11 | 2 |
muscle structure | 7.77e-11 | 2 |
muscle organ | 7.77e-11 | 2 |
pineal body | 8.15e-11 | 2 |
regional part of epithalamus | 8.15e-11 | 2 |
secretory circumventricular organ | 8.15e-11 | 2 |
circumventricular organ | 8.15e-11 | 2 |
epithalamus | 8.15e-11 | 2 |
adult organism | 5.54e-09 | 114 |
tongue | 1.34e-07 | 3 |
gustatory system | 1.34e-07 | 3 |
future tongue | 1.34e-07 | 3 |
omentum | 2.32e-07 | 6 |
peritoneum | 2.32e-07 | 6 |
abdominal cavity | 2.32e-07 | 6 |
visceral peritoneum | 2.32e-07 | 6 |
valve | 5.61e-07 | 3 |
cardiac mesenchyme | 5.61e-07 | 3 |
cardial valve | 5.61e-07 | 3 |
tunica intima | 5.61e-07 | 3 |
heart layer | 5.61e-07 | 3 |
endocardium | 5.61e-07 | 3 |
endocardial cushion | 5.61e-07 | 3 |
presumptive endocardium | 5.61e-07 | 3 |
cardiac chamber | 9.07e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.