FFCP PHASE1:Hg19::chr1:65532758..65532804,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3381|description=CAGE_peak_at_chr1:65532758..65532804,+|id=chr1:65532758..65532804,+|ontology_enrichment_celltype=CL:0000738!7.35e-53!140;CL:0000037!4.21e-45!172;CL:0000566!4.21e-45!172;CL:0002031!1.09e-42!124;CL:0000988!1.38e-41!182;CL:0002032!6.88e-41!165;CL:0000837!6.88e-41!165;CL:0002087!1.11e-40!119;CL:0002057!1.65e-38!42;CL:0000860!8.33e-35!45;CL:0000766!1.33e-34!76;CL:0000839!3.64e-28!70;CL:0000557!1.52e-27!71;CL:0000763!8.27e-26!112;CL:0000049!8.27e-26!112;CL:0002194!2.25e-24!63;CL:0000576!2.25e-24!63;CL:0000040!2.25e-24!63;CL:0000559!2.25e-24!63;CL:0002009!2.26e-24!65;CL:0000791!6.41e-16!18;CL:0000789!6.41e-16!18;CL:0002420!6.41e-16!18;CL:0002419!6.41e-16!18;CL:0000790!6.41e-16!18;CL:0000838!6.16e-14!52;CL:0000542!1.82e-13!53;CL:0000051!1.82e-13!53;CL:0000134!2.78e-12!358;CL:0002393!1.30e-11!9;CL:0002397!1.30e-11!9;CL:0002320!2.02e-11!365;CL:0000625!5.31e-11!11;CL:0000094!2.96e-10!8;CL:0000084!8.92e-10!25;CL:0000827!8.92e-10!25;CL:0000219!4.23e-09!390;CL:0000236!4.39e-09!14;CL:0000081!3.17e-08!11;CL:0000624!7.01e-08!6|ontology_enrichment_celltype_v019=CL:0000860;3.39e-29;33!CL:0002057;3.39e-29;33!CL:0000791;1.19e-23;18!CL:0000789;1.19e-23;18!CL:0002419;1.19e-23;18!CL:0000576;1.58e-23;48!CL:0000766;5.02e-23;69!CL:0002087;3.82e-22;104!CL:0000473;2.60e-20;39!CL:0000234;2.60e-20;39!CL:0000236;9.03e-17;13!CL:0000094;2.03e-16;8!CL:0000084;9.54e-16;25!CL:0000542;1.50e-15;53!CL:0000625;7.70e-15;11!CL:0000738;2.52e-14;136!CL:0002393;2.78e-13;6!CL:0002397;2.78e-13;6!CL:0000624;2.53e-12;6!CL:0000081;1.95e-11;11!CL:0000763;5.17e-11;100!CL:0000988;1.15e-10;177!CL:0000945;7.95e-08;24!CL:0000219;9.58e-08;193!CL:0000775;1.71e-07;3!CL:0000875;4.02e-07;3!CL:0002396;4.02e-07;3!CL:0000623;4.68e-07;3!CL:0000898;5.07e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,2.70e-74,136;CL:0002087,9.20e-64,115;CL:0000037,1.38e-62,168;CL:0002031,5.42e-62,120;CL:0002032,1.07e-58,161;CL:0000837,1.07e-58,161;CL:0000988,2.97e-58,177;CL:0000860,2.88e-48,42;CL:0002057,2.88e-48,42;CL:0000766,1.96e-47,72;CL:0000473,8.33e-41,48;CL:0000234,8.33e-41,48;CL:0000839,2.79e-35,66;CL:0000557,1.24e-34,67;CL:0002194,2.90e-32,59;CL:0000576,2.90e-32,59;CL:0000040,2.90e-32,59;CL:0000559,2.90e-32,59;CL:0000763,4.79e-31,108;CL:0000049,4.79e-31,108;CL:0002009,7.39e-31,61;CL:0000838,7.79e-26,52;CL:0000542,3.60e-25,53;CL:0000051,3.60e-25,53;CL:0000791,1.00e-23,18;CL:0000789,1.00e-23,18;CL:0002420,1.00e-23,18;CL:0002419,1.00e-23,18;CL:0000790,1.00e-23,18;CL:0000134,2.45e-19,354;CL:0002393,1.06e-18,9;CL:0002397,1.06e-18,9;CL:0002320,1.57e-18,361;CL:0000094,2.18e-16,8;CL:0000084,8.46e-16,25;CL:0000827,8.46e-16,25;CL:0000219,1.05e-15,386;CL:0000236,2.23e-15,14;CL:0000625,6.72e-15,11;CL:0000034,1.84e-12,441;CL:0000624,2.42e-12,6;CL:0000048,2.72e-12,427;CL:0000723,7.97e-12,433;CL:0000081,2.05e-11,11;CL:0000945,7.83e-08,24;CL:0000826,7.83e-08,24;CL:0000775,1.69e-07,3;CL:0000875,4.32e-07,3;CL:0002396,4.32e-07,3;CL:0000623,4.68e-07,3;CL:0000825,4.68e-07,3;CL:0000898,5.38e-07,3|ontology_enrichment_development_v019=CL:0002057;6.31e-35;42!CL:0000790;1.19e-23;18!CL:0000051;1.50e-15;53!CL:0000049;6.48e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.45e-34!102;UBERON:0003061!2.45e-34!102;UBERON:0002193!4.88e-29!112;UBERON:0002371!9.37e-25!80;UBERON:0001474!1.01e-21!86;UBERON:0004765!6.40e-19!101;UBERON:0001434!6.40e-19!101;UBERON:0002405!2.38e-15!115;UBERON:0002384!4.59e-11!375;UBERON:0003081!9.37e-11!216;UBERON:0000178!2.12e-10!15;UBERON:0000179!2.12e-10!15;UBERON:0000463!2.12e-10!15;UBERON:0002204!5.21e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;3.74e-15;15!UBERON:0000179;3.74e-15;15!UBERON:0000463;3.74e-15;15!UBERON:0002390;1.04e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.42e-43,98;UBERON:0003061,1.42e-43,98;UBERON:0002193,4.68e-38,108;UBERON:0002371,2.30e-32,76;UBERON:0001474,4.29e-29,82;UBERON:0002405,7.73e-26,93;UBERON:0004765,2.02e-25,90;UBERON:0001434,1.14e-21,100;UBERON:0002384,4.15e-18,371;UBERON:0000178,3.96e-15,15;UBERON:0000179,3.96e-15,15;UBERON:0000463,3.96e-15,15;UBERON:0003081,7.76e-14,203;UBERON:0002204,1.57e-08,167|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.194292582316,4.22212337906934,9.13415127564848,0,0,0,0,0,1.76160263600908,56.5075316702515,50.3366563150056,49.4784785232142,0.223915474239924,0.32389366601898,0,2.18097358169347,3.02300754951048,1.69808842831471,3.95129362739664,4.11167888021826,1.85823822537062,0.863077176966451,1.2808035326455,1.6553756092201,4.48169384957604,1.29096936716765,5.41705946377367,1.31769637679823,0.545812300115692,2.47195832889593,5.20342617030534,3.85114832491312,7.03270838378945,1.31940520074686,0.797854630486527,0.426224750532694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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3381 | |||
|description=CAGE_peak_at_chr1:65532758..65532804,+ | |||
|id=chr1:65532758..65532804,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.35e-53!140;CL:0000037!4.21e-45!172;CL:0000566!4.21e-45!172;CL:0002031!1.09e-42!124;CL:0000988!1.38e-41!182;CL:0002032!6.88e-41!165;CL:0000837!6.88e-41!165;CL:0002087!1.11e-40!119;CL:0002057!1.65e-38!42;CL:0000860!8.33e-35!45;CL:0000766!1.33e-34!76;CL:0000839!3.64e-28!70;CL:0000557!1.52e-27!71;CL:0000763!8.27e-26!112;CL:0000049!8.27e-26!112;CL:0002194!2.25e-24!63;CL:0000576!2.25e-24!63;CL:0000040!2.25e-24!63;CL:0000559!2.25e-24!63;CL:0002009!2.26e-24!65;CL:0000791!6.41e-16!18;CL:0000789!6.41e-16!18;CL:0002420!6.41e-16!18;CL:0002419!6.41e-16!18;CL:0000790!6.41e-16!18;CL:0000838!6.16e-14!52;CL:0000542!1.82e-13!53;CL:0000051!1.82e-13!53;CL:0000134!2.78e-12!358;CL:0002393!1.30e-11!9;CL:0002397!1.30e-11!9;CL:0002320!2.02e-11!365;CL:0000625!5.31e-11!11;CL:0000094!2.96e-10!8;CL:0000084!8.92e-10!25;CL:0000827!8.92e-10!25;CL:0000219!4.23e-09!390;CL:0000236!4.39e-09!14;CL:0000081!3.17e-08!11;CL:0000624!7.01e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.39e-29;33!CL:0002057;3.39e-29;33!CL:0000791;1.19e-23;18!CL:0000789;1.19e-23;18!CL:0002419;1.19e-23;18!CL:0000576;1.58e-23;48!CL:0000766;5.02e-23;69!CL:0002087;3.82e-22;104!CL:0000473;2.60e-20;39!CL:0000234;2.60e-20;39!CL:0000236;9.03e-17;13!CL:0000094;2.03e-16;8!CL:0000084;9.54e-16;25!CL:0000542;1.50e-15;53!CL:0000625;7.70e-15;11!CL:0000738;2.52e-14;136!CL:0002393;2.78e-13;6!CL:0002397;2.78e-13;6!CL:0000624;2.53e-12;6!CL:0000081;1.95e-11;11!CL:0000763;5.17e-11;100!CL:0000988;1.15e-10;177!CL:0000945;7.95e-08;24!CL:0000219;9.58e-08;193!CL:0000775;1.71e-07;3!CL:0000875;4.02e-07;3!CL:0002396;4.02e-07;3!CL:0000623;4.68e-07;3!CL:0000898;5.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.70e-74,136;CL:0002087,9.20e-64,115;CL:0000037,1.38e-62,168;CL:0002031,5.42e-62,120;CL:0002032,1.07e-58,161;CL:0000837,1.07e-58,161;CL:0000988,2.97e-58,177;CL:0000860,2.88e-48,42;CL:0002057,2.88e-48,42;CL:0000766,1.96e-47,72;CL:0000473,8.33e-41,48;CL:0000234,8.33e-41,48;CL:0000839,2.79e-35,66;CL:0000557,1.24e-34,67;CL:0002194,2.90e-32,59;CL:0000576,2.90e-32,59;CL:0000040,2.90e-32,59;CL:0000559,2.90e-32,59;CL:0000763,4.79e-31,108;CL:0000049,4.79e-31,108;CL:0002009,7.39e-31,61;CL:0000838,7.79e-26,52;CL:0000542,3.60e-25,53;CL:0000051,3.60e-25,53;CL:0000791,1.00e-23,18;CL:0000789,1.00e-23,18;CL:0002420,1.00e-23,18;CL:0002419,1.00e-23,18;CL:0000790,1.00e-23,18;CL:0000134,2.45e-19,354;CL:0002393,1.06e-18,9;CL:0002397,1.06e-18,9;CL:0002320,1.57e-18,361;CL:0000094,2.18e-16,8;CL:0000084,8.46e-16,25;CL:0000827,8.46e-16,25;CL:0000219,1.05e-15,386;CL:0000236,2.23e-15,14;CL:0000625,6.72e-15,11;CL:0000034,1.84e-12,441;CL:0000624,2.42e-12,6;CL:0000048,2.72e-12,427;CL:0000723,7.97e-12,433;CL:0000081,2.05e-11,11;CL:0000945,7.83e-08,24;CL:0000826,7.83e-08,24;CL:0000775,1.69e-07,3;CL:0000875,4.32e-07,3;CL:0002396,4.32e-07,3;CL:0000623,4.68e-07,3;CL:0000825,4.68e-07,3;CL:0000898,5.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.31e-35;42!CL:0000790;1.19e-23;18!CL:0000051;1.50e-15;53!CL:0000049;6.48e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.45e-34!102;UBERON:0003061!2.45e-34!102;UBERON:0002193!4.88e-29!112;UBERON:0002371!9.37e-25!80;UBERON:0001474!1.01e-21!86;UBERON:0004765!6.40e-19!101;UBERON:0001434!6.40e-19!101;UBERON:0002405!2.38e-15!115;UBERON:0002384!4.59e-11!375;UBERON:0003081!9.37e-11!216;UBERON:0000178!2.12e-10!15;UBERON:0000179!2.12e-10!15;UBERON:0000463!2.12e-10!15;UBERON:0002204!5.21e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.74e-15;15!UBERON:0000179;3.74e-15;15!UBERON:0000463;3.74e-15;15!UBERON:0002390;1.04e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.42e-43,98;UBERON:0003061,1.42e-43,98;UBERON:0002193,4.68e-38,108;UBERON:0002371,2.30e-32,76;UBERON:0001474,4.29e-29,82;UBERON:0002405,7.73e-26,93;UBERON:0004765,2.02e-25,90;UBERON:0001434,1.14e-21,100;UBERON:0002384,4.15e-18,371;UBERON:0000178,3.96e-15,15;UBERON:0000179,3.96e-15,15;UBERON:0000463,3.96e-15,15;UBERON:0003081,7.76e-14,203;UBERON:0002204,1.57e-08,167 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.194292582316,4.22212337906934,9.13415127564848,0,0,0,0,0,1.76160263600908,56.5075316702515,50.3366563150056,49.4784785232142,0.223915474239924,0.32389366601898,0,2.18097358169347,3.02300754951048,1.69808842831471,3.95129362739664,4.11167888021826,1.85823822537062,0.863077176966451,1.2808035326455,1.6553756092201,4.48169384957604,1.29096936716765,5.41705946377367,1.31769637679823,0.545812300115692,2.47195832889593,5.20342617030534,3.85114832491312,7.03270838378945,1.31940520074686,0.797854630486527,0.426224750532694,11.0279510678862,9.07816359505824,7.4738669879469,0.75374599577023,0.521482918420201,1.52032191293582,12.7133895553007,8.83866326370155,11.076183560431,9.50648788403738,14.882300997553,14.8857638310947,6.9643751310827,7.50884464207532,5.94684670779196,16.2457263932512,12.3328339863436,8.03722276564389,10.5597746676794,5.46138611262132,9.7846017924991,8.10787422876364,5.20514783146816,6.8970292794538,10.5767179645578,7.63243003628291,15.9379631350646,12.9192181661607,17.2022952656353,7.93027971474155,8.40762844472304,0.526768169550154,11.6058764367162,14.9344089844683,7.60725546298184,0.83593247695339,13.0368906653436,11.3627473376336,7.79306913631645,0.111410456885174,6.18672405697158,5.75988125917415,5.41607727530031,0.128091319725675,0.780356085359269,0.164437904603676,0.552700035571697,1.15921234294021,8.45233410023744,8.82884732696053,4.18142095219907,0.113309342697566,16.0952607312807,16.8377448286489,11.3858861408776,4.45991580053735,0.651083453856419,4.75226022224187,2.71035214339991,1.91979916731628,1.24930726552346,2.13099526839615,5.74789597844733,11.4915843638097,13.3720097891754,14.0479671766315,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,0.571994910780128,0.74291500265913,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,25.038279312852,27.1446184903828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.352193736052904,6.84182781284548,6.19715799692934,7.44830357215642,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85153801009636,12.506399341852,12.0642454102963,0,0,0,0,0,43.4424073889366,17.9496875522415,12.4324654030811,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,3.10152039184331,14.0214230532101,11.3131211271651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,1.5686127061494,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,3.55213326462519,6.117097657139,7.97506062043828,3.09701308095126,2.05681136543097,5.83625980073446,2.16012574895246,7.13812658664843,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,4.7896618469388,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.442317039724898,0.591095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,2.55493176133945,0,0,0.279282401272254,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.7520696820681,0,1.31149052283922,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.85359238546975,1.38251932362818,0,0,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.1515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| |||
|short_description=p@chr1:65532758..65532804,+ | |||
}} |
Revision as of 06:28, 12 September 2013
Short description: | p@chr1:65532758..65532804, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:65532758..65532804, + |
Coexpression cluster: | C3381_CD14_Neutrophils_Eosinophils_Peripheral_CD4_CD19_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.42e-43 | 98 |
blood island | 1.42e-43 | 98 |
hemolymphoid system | 4.68e-38 | 108 |
bone marrow | 2.30e-32 | 76 |
bone element | 4.29e-29 | 82 |
immune system | 7.73e-26 | 93 |
skeletal element | 2.02e-25 | 90 |
skeletal system | 1.14e-21 | 100 |
connective tissue | 4.15e-18 | 371 |
blood | 3.96e-15 | 15 |
haemolymphatic fluid | 3.96e-15 | 15 |
organism substance | 3.96e-15 | 15 |
lateral plate mesoderm | 7.76e-14 | 203 |
musculoskeletal system | 1.57e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.