FFCP PHASE1:Hg19::chr1:45276316..45276358,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=149478|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27145|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000475105_5end|description=CAGE_peak_4_at_BTBD19_5end|id=chr1:45276316..45276358,+|ontology_enrichment_celltype=CL:0002057!3.92e-35!42;CL:0000860!5.51e-32!45;CL:0002009!2.23e-29!65;CL:0000738!5.95e-28!140;CL:0000557!3.95e-27!71;CL:0002194!5.41e-27!63;CL:0000576!5.41e-27!63;CL:0000040!5.41e-27!63;CL:0000559!5.41e-27!63;CL:0000839!2.48e-24!70;CL:0000766!2.73e-24!76;CL:0002087!3.45e-24!119;CL:0002031!1.49e-22!124;CL:0000037!4.97e-20!172;CL:0000566!4.97e-20!172;CL:0000988!1.03e-18!182;CL:0002032!3.88e-16!165;CL:0000837!3.88e-16!165;CL:0000763!3.79e-15!112;CL:0000049!3.79e-15!112;CL:0000451!1.21e-08!10;CL:0000840!4.51e-07!5;CL:0001029!4.51e-07!5|ontology_enrichment_celltype_v019=CL:0000860;1.35e-72;33!CL:0002057;1.35e-72;33!CL:0000473;3.68e-56;39!CL:0000234;3.68e-56;39!CL:0000576;1.45e-38;48!CL:0000766;3.41e-24;69!CL:0000784;1.96e-17;3!CL:0002087;2.63e-15;104!CL:0000738;2.74e-12;136!CL:0000451;3.30e-12;10!CL:0000763;1.04e-11;100!CL:0001014;1.90e-11;2!CL:0001016;1.90e-11;2!CL:0000840;1.20e-08;5|ontology_enrichment_celltype_v019_2=CL:0000860,1.75e-66,42;CL:0002057,1.75e-66,42;CL:0000473,1.07e-62,48;CL:0000234,1.07e-62,48;CL:0002009,1.71e-60,61;CL:0000557,1.21e-54,67;CL:0002194,1.42e-53,59;CL:0000576,1.42e-53,59;CL:0000040,1.42e-53,59;CL:0000559,1.42e-53,59;CL:0000839,2.12e-47,66;CL:0000766,8.60e-47,72;CL:0000738,1.05e-46,136;CL:0002031,2.56e-41,120;CL:0002087,1.27e-40,115;CL:0000037,1.30e-36,168;CL:0000763,1.44e-34,108;CL:0000049,1.44e-34,108;CL:0000988,2.00e-34,177;CL:0002032,1.09e-33,161;CL:0000837,1.09e-33,161;CL:0000784,1.57e-17,3;CL:0000134,7.22e-14,354;CL:0002320,1.82e-13,361;CL:0000451,2.94e-12,10;CL:0000219,4.79e-12,386;CL:0001014,1.80e-11,2;CL:0001016,1.80e-11,2;CL:0000048,2.63e-10,427;CL:0000723,4.57e-10,433;CL:0000034,9.34e-10,441;CL:0000840,1.18e-08,5;CL:0001029,1.18e-08,5|ontology_enrichment_development_v019=CL:0002057;1.40e-52;42!CL:0000049;3.73e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;4.09e-07;1!DOID:0050177;4.09e-07;1!DOID:0050427;4.09e-07;1!DOID:12603;4.99e-07;1!DOID:4960;6.61e-07;1!DOID:0070004;6.61e-07;1|ontology_enrichment_disease_v019_2=DOID:630,4.09e-07,1;DOID:0050177,4.09e-07,1;DOID:0050427,4.09e-07,1;DOID:12603,5.13e-07,1;DOID:4960,5.75e-07,1;DOID:0070004,5.75e-07,1|ontology_enrichment_uberon=UBERON:0002390!1.35e-27!102;UBERON:0003061!1.35e-27!102;UBERON:0002193!3.95e-27!112;UBERON:0002371!1.48e-25!80;UBERON:0002405!1.48e-23!115;UBERON:0001474!8.68e-23!86;UBERON:0004765!2.65e-18!101;UBERON:0001434!2.65e-18!101;UBERON:0003081!2.47e-09!216;UBERON:0002204!3.41e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.79e-51,76;UBERON:0001474,2.54e-47,82;UBERON:0002405,3.41e-44,93;UBERON:0004765,1.23e-42,90;UBERON:0002390,1.18e-41,98;UBERON:0003061,1.18e-41,98;UBERON:0001434,8.03e-38,100;UBERON:0002193,2.85e-37,108;UBERON:0002204,2.48e-20,167;UBERON:0003081,4.84e-17,203;UBERON:0002384,6.46e-13,371;UBERON:0000926,8.39e-09,315;UBERON:0004120,8.39e-09,315;UBERON:0006603,8.39e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,0.985207073399349,0.708397031823113,0,0,0.309632246632152,0,0,0,0,0,0.587200878669695,0,0.601633342410425,1.08505435357926,0,0,0,1.59938062657521,2.26725566213286,4.85168122375632,1.85943229524548,1.23350366406548,2.16794459626573,0.863077176966451,2.81776777182011,0.945928919554341,0.689491361473237,1.93645405075148,1.35426486594342,1.69418105588344,3.27487380069415,0.674170453335254,2.75475503133812,0.962787081228281,3.19668562899521,2.63881040149373,3.59034583718937,2.13112375266347,1.16083695451434,1.13477044938228,1.86846674698672,0.502497330513487,3.12889751052121,1.08594422352558,0.605399502633369,1.47311054395026,2.21523671208619,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.649094787309367,0,0.664789802594326,9.06264372360299,6.29194401858141,2.97166001063652,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=149478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27145 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000475105_5end | |||
|description=CAGE_peak_4_at_BTBD19_5end | |||
|id=chr1:45276316..45276358,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.92e-35!42;CL:0000860!5.51e-32!45;CL:0002009!2.23e-29!65;CL:0000738!5.95e-28!140;CL:0000557!3.95e-27!71;CL:0002194!5.41e-27!63;CL:0000576!5.41e-27!63;CL:0000040!5.41e-27!63;CL:0000559!5.41e-27!63;CL:0000839!2.48e-24!70;CL:0000766!2.73e-24!76;CL:0002087!3.45e-24!119;CL:0002031!1.49e-22!124;CL:0000037!4.97e-20!172;CL:0000566!4.97e-20!172;CL:0000988!1.03e-18!182;CL:0002032!3.88e-16!165;CL:0000837!3.88e-16!165;CL:0000763!3.79e-15!112;CL:0000049!3.79e-15!112;CL:0000451!1.21e-08!10;CL:0000840!4.51e-07!5;CL:0001029!4.51e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-72;33!CL:0002057;1.35e-72;33!CL:0000473;3.68e-56;39!CL:0000234;3.68e-56;39!CL:0000576;1.45e-38;48!CL:0000766;3.41e-24;69!CL:0000784;1.96e-17;3!CL:0002087;2.63e-15;104!CL:0000738;2.74e-12;136!CL:0000451;3.30e-12;10!CL:0000763;1.04e-11;100!CL:0001014;1.90e-11;2!CL:0001016;1.90e-11;2!CL:0000840;1.20e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.75e-66,42;CL:0002057,1.75e-66,42;CL:0000473,1.07e-62,48;CL:0000234,1.07e-62,48;CL:0002009,1.71e-60,61;CL:0000557,1.21e-54,67;CL:0002194,1.42e-53,59;CL:0000576,1.42e-53,59;CL:0000040,1.42e-53,59;CL:0000559,1.42e-53,59;CL:0000839,2.12e-47,66;CL:0000766,8.60e-47,72;CL:0000738,1.05e-46,136;CL:0002031,2.56e-41,120;CL:0002087,1.27e-40,115;CL:0000037,1.30e-36,168;CL:0000763,1.44e-34,108;CL:0000049,1.44e-34,108;CL:0000988,2.00e-34,177;CL:0002032,1.09e-33,161;CL:0000837,1.09e-33,161;CL:0000784,1.57e-17,3;CL:0000134,7.22e-14,354;CL:0002320,1.82e-13,361;CL:0000451,2.94e-12,10;CL:0000219,4.79e-12,386;CL:0001014,1.80e-11,2;CL:0001016,1.80e-11,2;CL:0000048,2.63e-10,427;CL:0000723,4.57e-10,433;CL:0000034,9.34e-10,441;CL:0000840,1.18e-08,5;CL:0001029,1.18e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-52;42!CL:0000049;3.73e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;4.09e-07;1!DOID:0050177;4.09e-07;1!DOID:0050427;4.09e-07;1!DOID:12603;4.99e-07;1!DOID:4960;6.61e-07;1!DOID:0070004;6.61e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.09e-07,1;DOID:0050177,4.09e-07,1;DOID:0050427,4.09e-07,1;DOID:12603,5.13e-07,1;DOID:4960,5.75e-07,1;DOID:0070004,5.75e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.35e-27!102;UBERON:0003061!1.35e-27!102;UBERON:0002193!3.95e-27!112;UBERON:0002371!1.48e-25!80;UBERON:0002405!1.48e-23!115;UBERON:0001474!8.68e-23!86;UBERON:0004765!2.65e-18!101;UBERON:0001434!2.65e-18!101;UBERON:0003081!2.47e-09!216;UBERON:0002204!3.41e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.79e-51,76;UBERON:0001474,2.54e-47,82;UBERON:0002405,3.41e-44,93;UBERON:0004765,1.23e-42,90;UBERON:0002390,1.18e-41,98;UBERON:0003061,1.18e-41,98;UBERON:0001434,8.03e-38,100;UBERON:0002193,2.85e-37,108;UBERON:0002204,2.48e-20,167;UBERON:0003081,4.84e-17,203;UBERON:0002384,6.46e-13,371;UBERON:0000926,8.39e-09,315;UBERON:0004120,8.39e-09,315;UBERON:0006603,8.39e-09,315 | |||
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|short_description=p4@BTBD19 | |||
}} |
Revision as of 05:54, 12 September 2013
Short description: | p4@BTBD19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BTBD19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000475105_5end |
EntrezGene: | BTBD19 |
HGNC: | 27145 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.79e-51 | 76 |
bone element | 2.54e-47 | 82 |
immune system | 3.41e-44 | 93 |
skeletal element | 1.23e-42 | 90 |
hematopoietic system | 1.18e-41 | 98 |
blood island | 1.18e-41 | 98 |
skeletal system | 8.03e-38 | 100 |
hemolymphoid system | 2.85e-37 | 108 |
musculoskeletal system | 2.48e-20 | 167 |
lateral plate mesoderm | 4.84e-17 | 203 |
connective tissue | 6.46e-13 | 371 |
mesoderm | 8.39e-09 | 315 |
mesoderm-derived structure | 8.39e-09 | 315 |
presumptive mesoderm | 8.39e-09 | 315 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.09e-07 | 1 |
monogenic disease | 4.09e-07 | 1 |
xeroderma pigmentosum | 4.09e-07 | 1 |
acute leukemia | 5.13e-07 | 1 |
bone marrow cancer | 5.75e-07 | 1 |
myeloma | 5.75e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.