FFCP PHASE1:Hg19::chr1:42777312..42777314,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:42777312..42777314,+|id=chr1:42777312..42777314,+|ontology_enrichment_celltype=CL:0000650!2.39e-66!3;CL:1000618!2.39e-66!3;CL:1001318!2.39e-66!3;CL:0002173!2.39e-66!3;CL:1000500!2.39e-66!3;CL:0000669!1.48e-40!5;CL:1000612!1.78e-29!7;CL:1000746!1.78e-29!7;CL:0000630!2.62e-23!9;CL:1000507!6.76e-18!12;CL:1000494!6.76e-18!12;CL:0002681!1.21e-16!13;CL:0002584!1.21e-16!13;CL:1000449!8.02e-14!16;CL:1000497!1.85e-12!18;CL:0002518!1.85e-12!18|ontology_enrichment_celltype_v019=CL:0002188;1.48e-40;5!CL:1000746;1.78e-29;7!CL:1000612;1.78e-29;7!CL:0002681;6.76e-18;12!CL:0002584;6.76e-18;12!CL:1000449;1.22e-14;15!CL:1000497;4.22e-13;17!CL:0002518;4.22e-13;17!CL:0000115;4.53e-08;36|ontology_enrichment_celltype_v019_2=CL:0002188,1.48e-40,5;CL:1000746,1.78e-29,7;CL:1000612,1.78e-29,7;CL:0002681,6.76e-18,12;CL:0002584,6.76e-18,12;CL:1000449,1.22e-14,15;CL:1000497,4.22e-13,17;CL:0002518,4.22e-13,17;CL:0000115,5.81e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003567!2.39e-66!3;UBERON:0003838!2.39e-66!3;UBERON:0005169!2.39e-66!3;UBERON:0002321!2.39e-66!3;UBERON:0005215!2.39e-66!3;UBERON:0002303!2.39e-66!3;UBERON:0002319!2.39e-66!3;UBERON:0003891!1.48e-40!5;UBERON:0003586!1.48e-40!5;UBERON:0000074!1.78e-29!7;UBERON:0001229!1.78e-29!7;UBERON:0001230!1.78e-29!7;UBERON:0005749!1.78e-29!7;UBERON:0004199!1.78e-29!7;UBERON:0004209!1.78e-29!7;UBERON:0004198!1.78e-29!7;UBERON:0009773!6.76e-18!12;UBERON:0001231!6.76e-18!12;UBERON:0004810!6.76e-18!12;UBERON:0001225!1.21e-16!13;UBERON:0008987!1.21e-16!13;UBERON:0001851!8.02e-14!16;UBERON:0004211!8.02e-14!16;UBERON:0001285!8.02e-14!16;UBERON:0007684!8.02e-14!16;UBERON:0003220!8.02e-14!16;UBERON:0004208!8.02e-14!16;UBERON:0006555!4.22e-13!17;UBERON:0005103!4.22e-13!17;UBERON:0000083!4.22e-13!17;UBERON:0000353!4.22e-13!17;UBERON:0009201!4.22e-13!17;UBERON:0004819!4.22e-13!17;UBERON:0006553!4.22e-13!17;UBERON:0003074!4.22e-13!17;UBERON:0003060!4.22e-13!17;UBERON:0000080!1.85e-12!18;UBERON:0002120!1.85e-12!18;UBERON:0004875!1.85e-12!18;UBERON:0005721!1.85e-12!18;UBERON:0005754!1.85e-12!18;UBERON:0007297!1.85e-12!18;UBERON:0004876!2.29e-11!20;UBERON:0003887!6.74e-11!21;UBERON:0000058!4.34e-09!26;UBERON:0002113!8.32e-09!27;UBERON:0003918!8.32e-09!27;UBERON:0005095!8.32e-09!27;UBERON:0007687!8.32e-09!27;UBERON:0000489!1.18e-07!32;UBERON:0003064!8.21e-07!37|ontology_enrichment_uberon_v019=UBERON:0000074;1.78e-29;7!UBERON:0001229;1.78e-29;7!UBERON:0001225;6.76e-18;12!UBERON:0008987;6.76e-18;12!UBERON:0001851;1.22e-14;15!UBERON:0006555;1.22e-14;15!UBERON:0000353;1.22e-14;15!UBERON:0004819;1.22e-14;15!UBERON:0001285;1.22e-14;15!UBERON:0007684;1.22e-14;15!UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.78e-29,7;UBERON:0000074,1.78e-29,7;UBERON:0001229,1.78e-29,7;UBERON:0001230,1.78e-29,7;UBERON:0003220,1.78e-29,7;UBERON:0005749,1.78e-29,7;UBERON:0004199,1.78e-29,7;UBERON:0004209,1.78e-29,7;UBERON:0004198,1.78e-29,7;UBERON:0005103,5.22e-26,8;UBERON:0000083,5.22e-26,8;UBERON:0009201,5.22e-26,8;UBERON:0006553,5.22e-26,8;UBERON:0003074,5.22e-26,8;UBERON:0003060,5.22e-26,8;UBERON:0000080,2.62e-23,9;UBERON:0002120,2.62e-23,9;UBERON:0004875,2.62e-23,9;UBERON:0005721,2.62e-23,9;UBERON:0005754,2.62e-23,9;UBERON:0007297,2.62e-23,9;UBERON:0004876,2.25e-19,11;UBERON:0001225,6.76e-18,12;UBERON:0008987,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0001851,1.22e-14,15;UBERON:0004211,1.22e-14,15;UBERON:0009773,1.22e-14,15;UBERON:0000353,1.22e-14,15;UBERON:0001231,1.22e-14,15;UBERON:0001285,1.22e-14,15;UBERON:0007684,1.22e-14,15;UBERON:0004208,1.22e-14,15;UBERON:0006555,8.02e-14,16;UBERON:0004819,8.02e-14,16;UBERON:0000058,6.95e-12,19;UBERON:0002113,4.34e-09,26;UBERON:0003918,4.34e-09,26;UBERON:0011143,4.34e-09,26;UBERON:0005095,4.34e-09,26;UBERON:0007687,4.34e-09,26;UBERON:0003064,1.52e-08,28;UBERON:0000489,7.41e-08,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:42777312..42777314,+ | |||
|id=chr1:42777312..42777314,+ | |||
|ontology_enrichment_celltype=CL:0000650!2.39e-66!3;CL:1000618!2.39e-66!3;CL:1001318!2.39e-66!3;CL:0002173!2.39e-66!3;CL:1000500!2.39e-66!3;CL:0000669!1.48e-40!5;CL:1000612!1.78e-29!7;CL:1000746!1.78e-29!7;CL:0000630!2.62e-23!9;CL:1000507!6.76e-18!12;CL:1000494!6.76e-18!12;CL:0002681!1.21e-16!13;CL:0002584!1.21e-16!13;CL:1000449!8.02e-14!16;CL:1000497!1.85e-12!18;CL:0002518!1.85e-12!18 | |||
|ontology_enrichment_celltype_v019=CL:0002188;1.48e-40;5!CL:1000746;1.78e-29;7!CL:1000612;1.78e-29;7!CL:0002681;6.76e-18;12!CL:0002584;6.76e-18;12!CL:1000449;1.22e-14;15!CL:1000497;4.22e-13;17!CL:0002518;4.22e-13;17!CL:0000115;4.53e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.48e-40,5;CL:1000746,1.78e-29,7;CL:1000612,1.78e-29,7;CL:0002681,6.76e-18,12;CL:0002584,6.76e-18,12;CL:1000449,1.22e-14,15;CL:1000497,4.22e-13,17;CL:0002518,4.22e-13,17;CL:0000115,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003567!2.39e-66!3;UBERON:0003838!2.39e-66!3;UBERON:0005169!2.39e-66!3;UBERON:0002321!2.39e-66!3;UBERON:0005215!2.39e-66!3;UBERON:0002303!2.39e-66!3;UBERON:0002319!2.39e-66!3;UBERON:0003891!1.48e-40!5;UBERON:0003586!1.48e-40!5;UBERON:0000074!1.78e-29!7;UBERON:0001229!1.78e-29!7;UBERON:0001230!1.78e-29!7;UBERON:0005749!1.78e-29!7;UBERON:0004199!1.78e-29!7;UBERON:0004209!1.78e-29!7;UBERON:0004198!1.78e-29!7;UBERON:0009773!6.76e-18!12;UBERON:0001231!6.76e-18!12;UBERON:0004810!6.76e-18!12;UBERON:0001225!1.21e-16!13;UBERON:0008987!1.21e-16!13;UBERON:0001851!8.02e-14!16;UBERON:0004211!8.02e-14!16;UBERON:0001285!8.02e-14!16;UBERON:0007684!8.02e-14!16;UBERON:0003220!8.02e-14!16;UBERON:0004208!8.02e-14!16;UBERON:0006555!4.22e-13!17;UBERON:0005103!4.22e-13!17;UBERON:0000083!4.22e-13!17;UBERON:0000353!4.22e-13!17;UBERON:0009201!4.22e-13!17;UBERON:0004819!4.22e-13!17;UBERON:0006553!4.22e-13!17;UBERON:0003074!4.22e-13!17;UBERON:0003060!4.22e-13!17;UBERON:0000080!1.85e-12!18;UBERON:0002120!1.85e-12!18;UBERON:0004875!1.85e-12!18;UBERON:0005721!1.85e-12!18;UBERON:0005754!1.85e-12!18;UBERON:0007297!1.85e-12!18;UBERON:0004876!2.29e-11!20;UBERON:0003887!6.74e-11!21;UBERON:0000058!4.34e-09!26;UBERON:0002113!8.32e-09!27;UBERON:0003918!8.32e-09!27;UBERON:0005095!8.32e-09!27;UBERON:0007687!8.32e-09!27;UBERON:0000489!1.18e-07!32;UBERON:0003064!8.21e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.78e-29;7!UBERON:0001229;1.78e-29;7!UBERON:0001225;6.76e-18;12!UBERON:0008987;6.76e-18;12!UBERON:0001851;1.22e-14;15!UBERON:0006555;1.22e-14;15!UBERON:0000353;1.22e-14;15!UBERON:0004819;1.22e-14;15!UBERON:0001285;1.22e-14;15!UBERON:0007684;1.22e-14;15!UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.78e-29,7;UBERON:0000074,1.78e-29,7;UBERON:0001229,1.78e-29,7;UBERON:0001230,1.78e-29,7;UBERON:0003220,1.78e-29,7;UBERON:0005749,1.78e-29,7;UBERON:0004199,1.78e-29,7;UBERON:0004209,1.78e-29,7;UBERON:0004198,1.78e-29,7;UBERON:0005103,5.22e-26,8;UBERON:0000083,5.22e-26,8;UBERON:0009201,5.22e-26,8;UBERON:0006553,5.22e-26,8;UBERON:0003074,5.22e-26,8;UBERON:0003060,5.22e-26,8;UBERON:0000080,2.62e-23,9;UBERON:0002120,2.62e-23,9;UBERON:0004875,2.62e-23,9;UBERON:0005721,2.62e-23,9;UBERON:0005754,2.62e-23,9;UBERON:0007297,2.62e-23,9;UBERON:0004876,2.25e-19,11;UBERON:0001225,6.76e-18,12;UBERON:0008987,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0001851,1.22e-14,15;UBERON:0004211,1.22e-14,15;UBERON:0009773,1.22e-14,15;UBERON:0000353,1.22e-14,15;UBERON:0001231,1.22e-14,15;UBERON:0001285,1.22e-14,15;UBERON:0007684,1.22e-14,15;UBERON:0004208,1.22e-14,15;UBERON:0006555,8.02e-14,16;UBERON:0004819,8.02e-14,16;UBERON:0000058,6.95e-12,19;UBERON:0002113,4.34e-09,26;UBERON:0003918,4.34e-09,26;UBERON:0011143,4.34e-09,26;UBERON:0005095,4.34e-09,26;UBERON:0007687,4.34e-09,26;UBERON:0003064,1.52e-08,28;UBERON:0000489,7.41e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12337338995456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:42777312..42777314,+ | |||
}} |
Revision as of 05:46, 12 September 2013
Short description: | p@chr1:42777312..42777314, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:42777312..42777314, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.48e-40 | 5 |
glomerular cell | 1.78e-29 | 7 |
kidney corpuscule cell | 1.78e-29 | 7 |
kidney cortical cell | 6.76e-18 | 12 |
renal cortical epithelial cell | 6.76e-18 | 12 |
epithelial cell of nephron | 1.22e-14 | 15 |
kidney cell | 4.22e-13 | 17 |
kidney epithelial cell | 4.22e-13 | 17 |
endothelial cell | 5.81e-07 | 36 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.