FFCP PHASE1:Hg19::chr1:33338076..33338105,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=252995|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20240|TSSclassifier=S|UniProt=Q8NAU1|association_with_transcript=0bp_to_ENST00000465346,ENST00000496770,NM_001171941,uc001bwg.2_5end|coexpression_cluster_id=C163|description=CAGE_peak_3_at_FNDC5_5end|id=chr1:33338076..33338105,-|ontology_enrichment_celltype=CL:0000188!2.08e-12!9|ontology_enrichment_celltype_v019=CL:0000123;5.62e-16;2!CL:0000242;5.62e-16;2!CL:0000188;2.76e-08;9!CL:0000333;5.56e-07;5!CL:0000312;6.55e-07;5|ontology_enrichment_celltype_v019_2=CL:0000242,4.65e-16,2;CL:0000188,2.73e-08,9;CL:0000312,6.08e-07,5|ontology_enrichment_development_v019=UBERON:0006215;1.66e-22;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;3.03e-07;10|ontology_enrichment_disease_v019_2=DOID:171,3.00e-07,10|ontology_enrichment_uberon=UBERON:0000073!7.48e-10!94;UBERON:0001016!7.48e-10!94;UBERON:0005743!1.15e-09!86;UBERON:0001017!1.50e-09!82;UBERON:0002346!2.16e-07!90;UBERON:0000924!5.45e-07!173;UBERON:0006601!5.45e-07!173|ontology_enrichment_uberon_v019=UBERON:0001134;7.20e-12;16!UBERON:0002036;7.20e-12;16!UBERON:0002037;1.50e-11;6!UBERON:0005795;9.02e-09;1!UBERON:0002426;9.02e-09;1!UBERON:0003831;9.02e-09;1!UBERON:0003898;9.02e-09;1!UBERON:0004830;9.02e-09;1!UBERON:0003830;9.02e-09;1!UBERON:0005175;9.02e-09;1!UBERON:0001774;9.02e-09;1!UBERON:0001103;9.02e-09;1!UBERON:0002680;7.28e-08;9!UBERON:0001895;7.28e-08;9!UBERON:0000013;5.56e-07;5!UBERON:0002410;5.56e-07;5!UBERON:0002050;9.31e-07;5!UBERON:0005423;9.31e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.42e-11,6;UBERON:0006215,1.42e-11,6;UBERON:0002426,1.05e-08,1;UBERON:0003831,1.05e-08,1;UBERON:0003898,1.05e-08,1;UBERON:0004830,1.05e-08,1;UBERON:0003830,1.05e-08,1;UBERON:0005175,1.05e-08,1;UBERON:0001774,1.05e-08,1;UBERON:0001103,1.05e-08,1;UBERON:0010084,1.05e-08,1;UBERON:0002680,7.02e-08,9;UBERON:0001895,7.02e-08,9;UBERON:0010092,7.02e-08,9;UBERON:0000013,5.57e-07,5;UBERON:0002410,5.57e-07,5|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,5.76175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3104740401783,0.154048617114644,0.307007349452259,0.827019434907183,0.107420244868274,0.580066775656914,3.49429172406014,30.0928280485972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,1.21537496453305,0,0,3.05163472634166,1.76926815889959,1.18219047581419,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,2.40773294189637,0.234264445725339,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,2.9171149636534,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0.415045904808692,0,0,0,0,1.40500471742064,12.3182874319201,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60024988196838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8710215608104,2.58779547352036,0,0,0,1.2754495206101,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0.41023272848151,0.504143392443436,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=252995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20240 | |||
|TSSclassifier=S | |||
|UniProt=Q8NAU1 | |||
|association_with_transcript=0bp_to_ENST00000465346,ENST00000496770,NM_001171941,uc001bwg.2_5end | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_3_at_FNDC5_5end | |||
|id=chr1:33338076..33338105,- | |||
|ontology_enrichment_celltype=CL:0000188!2.08e-12!9 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.62e-16;2!CL:0000242;5.62e-16;2!CL:0000188;2.76e-08;9!CL:0000333;5.56e-07;5!CL:0000312;6.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.65e-16,2;CL:0000188,2.73e-08,9;CL:0000312,6.08e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.66e-22;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;3.03e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.00e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.48e-10!94;UBERON:0001016!7.48e-10!94;UBERON:0005743!1.15e-09!86;UBERON:0001017!1.50e-09!82;UBERON:0002346!2.16e-07!90;UBERON:0000924!5.45e-07!173;UBERON:0006601!5.45e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.20e-12;16!UBERON:0002036;7.20e-12;16!UBERON:0002037;1.50e-11;6!UBERON:0005795;9.02e-09;1!UBERON:0002426;9.02e-09;1!UBERON:0003831;9.02e-09;1!UBERON:0003898;9.02e-09;1!UBERON:0004830;9.02e-09;1!UBERON:0003830;9.02e-09;1!UBERON:0005175;9.02e-09;1!UBERON:0001774;9.02e-09;1!UBERON:0001103;9.02e-09;1!UBERON:0002680;7.28e-08;9!UBERON:0001895;7.28e-08;9!UBERON:0000013;5.56e-07;5!UBERON:0002410;5.56e-07;5!UBERON:0002050;9.31e-07;5!UBERON:0005423;9.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.42e-11,6;UBERON:0006215,1.42e-11,6;UBERON:0002426,1.05e-08,1;UBERON:0003831,1.05e-08,1;UBERON:0003898,1.05e-08,1;UBERON:0004830,1.05e-08,1;UBERON:0003830,1.05e-08,1;UBERON:0005175,1.05e-08,1;UBERON:0001774,1.05e-08,1;UBERON:0001103,1.05e-08,1;UBERON:0010084,1.05e-08,1;UBERON:0002680,7.02e-08,9;UBERON:0001895,7.02e-08,9;UBERON:0010092,7.02e-08,9;UBERON:0000013,5.57e-07,5;UBERON:0002410,5.57e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,5.76175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3104740401783,0.154048617114644,0.307007349452259,0.827019434907183,0.107420244868274,0.580066775656914,3.49429172406014,30.0928280485972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,1.21537496453305,0,0,3.05163472634166,1.76926815889959,1.18219047581419,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,2.40773294189637,0.234264445725339,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,2.9171149636534,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0.415045904808692,0,0,0,0,1.40500471742064,12.3182874319201,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60024988196838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8710215608104,2.58779547352036,0,0,0,1.2754495206101,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0.41023272848151,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.571812353413251,1.58013611732727,0,8.17133879822123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,17.397216470073,0.971421986118279,0,3.18321240258189,0,0,0.879524133963433,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0.872701380680755,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0.639701945702943,4.76128862927481,0.0645889098360061,0.0620747142958579,0,0,0.404234377916439,0.217716747896961,2.73786640868225,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,2.44137706989443,0,0,0 | |||
|short_description=p3@FNDC5 | |||
}} |
Revision as of 05:20, 12 September 2013
Short description: | p3@FNDC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FNDC5_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | 0bp_to_ENST00000465346, ENST00000496770, NM_001171941, uc001bwg.2_5end |
EntrezGene: | FNDC5 |
HGNC: | 20240 |
UniProt: | Q8NAU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.65e-16 | 2 |
cell of skeletal muscle | 2.73e-08 | 9 |
keratinocyte | 6.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.42e-11 | 6 |
rhombic lip | 1.42e-11 | 6 |
chest muscle | 1.05e-08 | 1 |
respiratory system muscle | 1.05e-08 | 1 |
skeletal muscle of trunk | 1.05e-08 | 1 |
respiratory system skeletal muscle | 1.05e-08 | 1 |
thoracic segment muscle | 1.05e-08 | 1 |
chest organ | 1.05e-08 | 1 |
muscle of trunk | 1.05e-08 | 1 |
diaphragm | 1.05e-08 | 1 |
future diaphragm | 1.05e-08 | 1 |
regional part of metencephalon | 7.02e-08 | 9 |
metencephalon | 7.02e-08 | 9 |
future metencephalon | 7.02e-08 | 9 |
sympathetic nervous system | 5.57e-07 | 5 |
autonomic nervous system | 5.57e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.00e-07 | 10 |
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