FFCP PHASE1:Hg19::chr1:27994801..27994861,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1855|description=CAGE_peak_at_chr1:27994801..27994861,-|id=chr1:27994801..27994861,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000235;2.01e-11;6!CL:0000244;1.25e-08;4!CL:0000731;1.25e-08;4!CL:0002541;8.85e-07;3|ontology_enrichment_celltype_v019_2=CL:0000235,3.40e-11,6;CL:0000244,1.14e-08,4;CL:0000731,1.14e-08,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000365;7.07e-07;5!UBERON:0003124;8.85e-07;3!UBERON:0000920;8.85e-07;3!UBERON:0005631;9.04e-07;10!UBERON:0000158;9.04e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.60e-07,5|phase1_expression=0,0.856402095563933,0.140954404095971,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0,0,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0,0,0,1.96682138424452,0.383829398097213,0.154816123316076,0,0,0,0,0,0,1.66198622559563,0,0.434021741431704,0.223915474239924,0.647787332037959,0,0,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0.863077176966451,0.512321413058201,0.709446689665756,1.37898272294647,0,0,0.564727018627814,0.272906150057846,0,0.306083892370903,0.641858054152187,0.639337125799041,1.31940520074686,0.997318288108159,1.27867425159808,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,0,0.434377689410233,2.42159801053347,0.368277635987565,0.316462387440884,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.25618263945135,0.910415432919148,0.493313713811028,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0,0,0.434473211648397,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,0.144846518960824,1.5905718941022,1.94653948121054,0.189069634328136,0,0.087834785693126,1.44076983047484,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0,0,0,0,0,0,0,0,0.225222960966644,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0.436094052142534,0.993943903390637,0,0,0.573673241497627,0,0,0,1.72667283892012,0,0,0,0.302714855289863,0,0.468642863667593,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0,22.572054288359,6.42894016124248,0,0,0,0,0.277064115484183,0.438977620880838,0,10.817140241275,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,1.38134921352481,0,1.44375896333917,0.828147600278907,0.842923450390509,0,0.220587945464788,0.871517776369625,0.71181185733329,1.07865046528132,0.98110732562673,0,0,0,0,0,0,0.982827216677626,0,0,0.491953754172454,0,0,0,0.603173834469785,0,3.9096996637239,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0,3.20082107913617,3.7440682422278,1.78357394746474,0.93733833986777,2.35174979478403,1.70130116690864,0,0.290633938513962,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0.63497894292169,1.52795370223311,1.17217447210047,0,0.102827492703324,2.10240140490742,6.28818151787272,0,0,0,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,1.00451418286425,4.21667878966063,0,0,1.42636905040718,1.59259437334337,0.205476322550383,0.179060963239896,0.448340575974109,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0.207970861530807,0.535286966391485,0.473107245101804,0.35142424497814,0,0,2.0694614258501,0,0,0.0868836144680828,2.15381273209015,3.77457766191941,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0,0.164254312027618,1.03850885836724,0.813472649219715,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,1.854738209659,0.183138929636687,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0.6970372701606,9.85707456563484,0,0,0,0.572499546967965,0,0.316379424718726,0.571890581771475,0,0,0.636406495851874,2.35484592059769,0,0,0,0,1.58510321173008,0.421258456238981,0,14.6228093778771,0,0,0.141405431953713,3.3902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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1855 | |||
|description=CAGE_peak_at_chr1:27994801..27994861,- | |||
|id=chr1:27994801..27994861,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.01e-11;6!CL:0000244;1.25e-08;4!CL:0000731;1.25e-08;4!CL:0002541;8.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.40e-11,6;CL:0000244,1.14e-08,4;CL:0000731,1.14e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.07e-07;5!UBERON:0003124;8.85e-07;3!UBERON:0000920;8.85e-07;3!UBERON:0005631;9.04e-07;10!UBERON:0000158;9.04e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.60e-07,5 | |||
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| |||
|short_description=p@chr1:27994801..27994861,- | |||
}} |
Revision as of 05:05, 12 September 2013
Short description: | p@chr1:27994801..27994861, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:27994801..27994861, - |
Coexpression cluster: | C1855_Fibroblast_Smooth_gall_mesothelioma_choriocarcinoma_mesenchymal_rectal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.40e-11 | 6 |
transitional epithelial cell | 1.14e-08 | 4 |
urothelial cell | 1.14e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.60e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.