FFCP PHASE1:Hg19::chr1:25291461..25291472,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=864|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10473|TSSclassifier=S|UniProt=|association_with_transcript=2bp_to_ENST00000338888,uc009vrj.2_5end|coexpression_cluster_id=C80|description=CAGE_peak_11_at_RUNX3_5end|id=chr1:25291461..25291472,-|ontology_enrichment_celltype=CL:0000838!1.24e-18!52;CL:0000542!3.65e-18!53;CL:0000051!3.65e-18!53;CL:0000988!1.29e-17!182;CL:0000037!4.48e-16!172;CL:0000566!4.48e-16!172;CL:0002032!3.31e-15!165;CL:0000837!3.31e-15!165;CL:0000453!5.38e-14!5;CL:0000738!5.27e-13!140;CL:0000080!3.78e-10!6;CL:0002031!9.69e-10!124;CL:0002087!2.33e-09!119;CL:0000084!1.19e-08!25;CL:0000827!1.19e-08!25;CL:0000623!1.63e-08!3;CL:0000825!1.63e-08!3;CL:0000990!1.51e-07!8;CL:0000945!3.31e-07!24;CL:0000826!3.31e-07!24;CL:0001014!6.42e-07!2;CL:0001016!6.42e-07!2|ontology_enrichment_celltype_v019=CL:0000453;6.72e-36;5!CL:0001014;6.37e-24;2!CL:0001016;6.37e-24;2!CL:0000990;4.10e-20;8!CL:0000451;1.63e-16;10!CL:0000840;1.34e-08;5!CL:0000542;1.23e-07;53!CL:0000945;1.31e-07;24!CL:0000084;2.17e-07;25|ontology_enrichment_celltype_v019_2=CL:0000453,6.16e-36,5;CL:0001014,6.38e-24,2;CL:0001016,6.38e-24,2;CL:0000990,3.90e-20,8;CL:0000451,1.57e-16,10;CL:0000838,3.92e-16,52;CL:0000542,8.28e-16,53;CL:0000051,8.28e-16,53;CL:0002032,2.51e-13,161;CL:0000837,2.51e-13,161;CL:0000037,1.09e-12,168;CL:0000988,6.13e-12,177;CL:0000738,7.36e-12,136;CL:0002031,1.28e-09,120;CL:0000840,1.34e-08,5;CL:0001029,1.34e-08,5;CL:0000945,1.23e-07,24;CL:0000826,1.23e-07,24;CL:0000084,2.40e-07,25;CL:0000827,2.40e-07,25|ontology_enrichment_development_v019=CL:0000051;1.23e-07;53|ontology_enrichment_disease=DOID:2531!3.39e-10!51;DOID:0060083!3.39e-10!51;DOID:0060058!1.19e-08!10|ontology_enrichment_disease_v019=DOID:630;3.08e-12;1!DOID:0050177;3.08e-12;1!DOID:3347;3.08e-12;1!DOID:0050427;3.08e-12;1!DOID:1909;6.24e-07;2|ontology_enrichment_disease_v019_2=DOID:630,3.08e-12,1;DOID:0050177,3.08e-12,1;DOID:0050427,3.08e-12,1;DOID:3347,4.81e-12,1;DOID:1909,6.42e-07,2|ontology_enrichment_uberon=UBERON:0004177!2.17e-08!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,2.38091709404843,2.67616656466509,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0,0.579606171470105,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,2.21767417547206,0.802320587350522,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.985153801009636,0.215627574859517,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824125183365091,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4939787103167,0,0.59873811429845,0.191505370132367,1.90506224451495,0,0,0,0,0,1.52362600021443,0.963528450622197,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.494255755786011,0.730953646538188,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,3.6804229599104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,9.89885122826602,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28372266835974,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,1.46151324344699,1.96278473107013,0.327609848846413,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0.596748666348824,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,2.99823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.60284246151616|short_description=p11@RUNX3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=864 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENST00000338888,uc009vrj.2_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_11_at_RUNX3_5end | |||
|id=chr1:25291461..25291472,- | |||
|ontology_enrichment_celltype=CL:0000838!1.24e-18!52;CL:0000542!3.65e-18!53;CL:0000051!3.65e-18!53;CL:0000988!1.29e-17!182;CL:0000037!4.48e-16!172;CL:0000566!4.48e-16!172;CL:0002032!3.31e-15!165;CL:0000837!3.31e-15!165;CL:0000453!5.38e-14!5;CL:0000738!5.27e-13!140;CL:0000080!3.78e-10!6;CL:0002031!9.69e-10!124;CL:0002087!2.33e-09!119;CL:0000084!1.19e-08!25;CL:0000827!1.19e-08!25;CL:0000623!1.63e-08!3;CL:0000825!1.63e-08!3;CL:0000990!1.51e-07!8;CL:0000945!3.31e-07!24;CL:0000826!3.31e-07!24;CL:0001014!6.42e-07!2;CL:0001016!6.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.72e-36;5!CL:0001014;6.37e-24;2!CL:0001016;6.37e-24;2!CL:0000990;4.10e-20;8!CL:0000451;1.63e-16;10!CL:0000840;1.34e-08;5!CL:0000542;1.23e-07;53!CL:0000945;1.31e-07;24!CL:0000084;2.17e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.16e-36,5;CL:0001014,6.38e-24,2;CL:0001016,6.38e-24,2;CL:0000990,3.90e-20,8;CL:0000451,1.57e-16,10;CL:0000838,3.92e-16,52;CL:0000542,8.28e-16,53;CL:0000051,8.28e-16,53;CL:0002032,2.51e-13,161;CL:0000837,2.51e-13,161;CL:0000037,1.09e-12,168;CL:0000988,6.13e-12,177;CL:0000738,7.36e-12,136;CL:0002031,1.28e-09,120;CL:0000840,1.34e-08,5;CL:0001029,1.34e-08,5;CL:0000945,1.23e-07,24;CL:0000826,1.23e-07,24;CL:0000084,2.40e-07,25;CL:0000827,2.40e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.23e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!3.39e-10!51;DOID:0060083!3.39e-10!51;DOID:0060058!1.19e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:630;3.08e-12;1!DOID:0050177;3.08e-12;1!DOID:3347;3.08e-12;1!DOID:0050427;3.08e-12;1!DOID:1909;6.24e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.08e-12,1;DOID:0050177,3.08e-12,1;DOID:0050427,3.08e-12,1;DOID:3347,4.81e-12,1;DOID:1909,6.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.17e-08!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,2.38091709404843,2.67616656466509,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0,0.579606171470105,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,2.21767417547206,0.802320587350522,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.985153801009636,0.215627574859517,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824125183365091,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4939787103167,0,0.59873811429845,0.191505370132367,1.90506224451495,0,0,0,0,0,1.52362600021443,0.963528450622197,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.494255755786011,0.730953646538188,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,3.6804229599104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,9.89885122826602,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28372266835974,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,1.46151324344699,1.96278473107013,0.327609848846413,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0.596748666348824,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,2.99823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.60284246151616 | |||
|short_description=p11@RUNX3 | |||
}} |
Revision as of 04:52, 12 September 2013
Short description: | p11@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_RUNX3_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 2bp_to_ENST00000338888, uc009vrj.2_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.16e-36 | 5 |
CD1a-positive Langerhans cell | 6.38e-24 | 2 |
immature CD1a-positive Langerhans cell | 6.38e-24 | 2 |
conventional dendritic cell | 3.90e-20 | 8 |
dendritic cell | 1.57e-16 | 10 |
lymphoid lineage restricted progenitor cell | 3.92e-16 | 52 |
lymphocyte | 8.28e-16 | 53 |
common lymphoid progenitor | 8.28e-16 | 53 |
hematopoietic oligopotent progenitor cell | 2.51e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.51e-13 | 161 |
hematopoietic stem cell | 1.09e-12 | 168 |
hematopoietic cell | 6.13e-12 | 177 |
leukocyte | 7.36e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.28e-09 | 120 |
immature conventional dendritic cell | 1.34e-08 | 5 |
common dendritic progenitor | 1.34e-08 | 5 |
lymphocyte of B lineage | 1.23e-07 | 24 |
pro-B cell | 1.23e-07 | 24 |
T cell | 2.40e-07 | 25 |
pro-T cell | 2.40e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.08e-12 | 1 |
monogenic disease | 3.08e-12 | 1 |
xeroderma pigmentosum | 3.08e-12 | 1 |
osteosarcoma | 4.81e-12 | 1 |
melanoma | 6.42e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.