FFCP PHASE1:Hg19::chr1:25256756..25256774,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=864|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10473|TSSclassifier=S|UniProt=E9PH34,Q13761|association_with_transcript=0bp_to_ENST00000428150,NM_004350,uc001bjq.2,uc010oen.1_5end|coexpression_cluster_id=C8|description=CAGE_peak_1_at_RUNX3_5end|id=chr1:25256756..25256774,-|ontology_enrichment_celltype=CL:0000738!6.98e-59!140;CL:0000037!1.43e-56!172;CL:0000566!1.43e-56!172;CL:0000988!1.54e-55!182;CL:0002032!9.98e-53!165;CL:0000837!9.98e-53!165;CL:0002087!1.18e-47!119;CL:0002031!1.63e-47!124;CL:0000766!4.02e-27!76;CL:0000763!4.41e-27!112;CL:0000049!4.41e-27!112;CL:0000557!4.98e-24!71;CL:0000542!7.15e-24!53;CL:0000051!7.15e-24!53;CL:0000838!1.19e-23!52;CL:0002057!1.64e-23!42;CL:0000839!4.61e-22!70;CL:0002009!1.52e-21!65;CL:0002194!8.48e-21!63;CL:0000576!8.48e-21!63;CL:0000040!8.48e-21!63;CL:0000559!8.48e-21!63;CL:0000860!1.48e-20!45;CL:0000084!1.29e-12!25;CL:0000827!1.29e-12!25;CL:0000791!3.64e-12!18;CL:0000789!3.64e-12!18;CL:0002420!3.64e-12!18;CL:0002419!3.64e-12!18;CL:0000790!3.64e-12!18;CL:0000134!1.62e-10!358;CL:0002320!3.09e-10!365;CL:0000945!3.31e-10!24;CL:0000826!3.31e-10!24;CL:0000219!7.11e-09!390;CL:0000625!7.55e-08!11|ontology_enrichment_celltype_v019=CL:0000860;7.94e-19;33!CL:0002057;7.94e-19;33!CL:0000576;4.36e-17;48!CL:0002087;1.17e-16;104!CL:0000473;3.56e-15;39!CL:0000234;3.56e-15;39!CL:0000766;1.95e-14;69!CL:0000542;2.75e-14;53!CL:0000738;7.16e-14;136!CL:0000084;2.04e-13;25!CL:0000791;3.50e-13;18!CL:0000789;3.50e-13;18!CL:0002419;3.50e-13;18!CL:0000945;3.48e-11;24!CL:0000988;5.63e-11;177!CL:0000763;8.05e-10;100!CL:0000625;1.87e-08;11!CL:0000081;7.71e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,5.54e-68,136;CL:0000037,1.95e-64,168;CL:0000988,5.02e-64,177;CL:0002032,3.56e-60,161;CL:0000837,3.56e-60,161;CL:0002087,1.41e-55,115;CL:0002031,1.90e-54,120;CL:0000766,6.40e-33,72;CL:0000763,1.06e-31,108;CL:0000049,1.06e-31,108;CL:0000557,2.09e-29,67;CL:0002009,1.22e-26,61;CL:0000839,2.55e-26,66;CL:0000542,6.59e-26,53;CL:0000051,6.59e-26,53;CL:0002194,8.21e-26,59;CL:0000576,8.21e-26,59;CL:0000040,8.21e-26,59;CL:0000559,8.21e-26,59;CL:0000838,1.15e-25,52;CL:0000860,1.31e-25,42;CL:0002057,1.31e-25,42;CL:0000473,9.14e-25,48;CL:0000234,9.14e-25,48;CL:0000134,5.40e-15,354;CL:0002320,3.42e-14,361;CL:0000084,2.08e-13,25;CL:0000827,2.08e-13,25;CL:0000791,3.57e-13,18;CL:0000789,3.57e-13,18;CL:0002420,3.57e-13,18;CL:0002419,3.57e-13,18;CL:0000790,3.57e-13,18;CL:0000219,1.24e-12,386;CL:0000945,3.54e-11,24;CL:0000826,3.54e-11,24;CL:0000625,1.90e-08,11;CL:0000081,7.84e-07,11|ontology_enrichment_development_v019=CL:0002057;9.63e-19;42!CL:0000051;2.75e-14;53!CL:0000790;3.50e-13;18!CL:0000049;4.05e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.45e-32!102;UBERON:0003061!5.45e-32!102;UBERON:0002193!3.62e-27!112;UBERON:0002371!1.18e-21!80;UBERON:0001474!7.23e-20!86;UBERON:0004765!9.11e-18!101;UBERON:0001434!9.11e-18!101;UBERON:0002405!6.98e-14!115;UBERON:0002384!3.95e-10!375;UBERON:0000178!1.42e-08!15;UBERON:0000179!1.42e-08!15;UBERON:0000463!1.42e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.97e-09;15!UBERON:0000179;2.97e-09;15!UBERON:0000463;2.97e-09;15!UBERON:0002390;3.58e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.17e-37,98;UBERON:0003061,2.17e-37,98;UBERON:0002193,3.02e-32,108;UBERON:0002371,8.37e-26,76;UBERON:0002405,2.45e-24,93;UBERON:0001474,5.82e-24,82;UBERON:0001434,1.20e-20,100;UBERON:0004765,1.77e-20,90;UBERON:0002384,1.92e-13,371;UBERON:0000178,3.06e-09,15;UBERON:0000179,3.06e-09,15;UBERON:0000463,3.06e-09,15|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.410623275218653,1.00434111675842,94.5233829102157,98.2744055715851,88.2347858526344,137.677496897116,190.763210854315,198.629086214526,0,0.90361775633475,0.739508020333575,2.47895041856965,58.4315545523302,30.5344456908241,108.583100072248,145.194179968383,179.467990082009,13.2110129801555,16.8424706329869,12.8787783817093,188.726913935875,186.292840238583,220.994079742101,112.495653862351,115.949344422155,94.7701494939017,153.340045107706,165.735977124328,84.6606383001135,54.4698175563857,69.7123458270532,89.3814811522656,161.511927327555,144.3673533806,90.7882877158142,103.762439513736,87.9345534188496,116.359356895426,218.031709423419,230.181060895363,198.194508997703,27.5698776697155,32.340957807395,51.6942466666327,125.624332628372,116.812173726125,82.5317609879443,27.2429776185016,22.0966581592539,28.1651524822387,33.8008458099107,58.8913910903171,31.6584554717648,16.9616233031208,11.4134438559545,7.87555374815693,67.2630075229347,49.1324192681753,39.6381213669256,40.4791362261042,38.7758413996113,32.9118423929515,37.1255293632861,28.8285110665929,36.2094037171324,25.7807500386096,33.3918814087377,64.8902784784771,113.336777548591,111.623782612567,83.2679370047863,86.3183186991565,9.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=864 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |||
|TSSclassifier=S | |||
|UniProt=E9PH34,Q13761 | |||
|association_with_transcript=0bp_to_ENST00000428150,NM_004350,uc001bjq.2,uc010oen.1_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_1_at_RUNX3_5end | |||
|id=chr1:25256756..25256774,- | |||
|ontology_enrichment_celltype=CL:0000738!6.98e-59!140;CL:0000037!1.43e-56!172;CL:0000566!1.43e-56!172;CL:0000988!1.54e-55!182;CL:0002032!9.98e-53!165;CL:0000837!9.98e-53!165;CL:0002087!1.18e-47!119;CL:0002031!1.63e-47!124;CL:0000766!4.02e-27!76;CL:0000763!4.41e-27!112;CL:0000049!4.41e-27!112;CL:0000557!4.98e-24!71;CL:0000542!7.15e-24!53;CL:0000051!7.15e-24!53;CL:0000838!1.19e-23!52;CL:0002057!1.64e-23!42;CL:0000839!4.61e-22!70;CL:0002009!1.52e-21!65;CL:0002194!8.48e-21!63;CL:0000576!8.48e-21!63;CL:0000040!8.48e-21!63;CL:0000559!8.48e-21!63;CL:0000860!1.48e-20!45;CL:0000084!1.29e-12!25;CL:0000827!1.29e-12!25;CL:0000791!3.64e-12!18;CL:0000789!3.64e-12!18;CL:0002420!3.64e-12!18;CL:0002419!3.64e-12!18;CL:0000790!3.64e-12!18;CL:0000134!1.62e-10!358;CL:0002320!3.09e-10!365;CL:0000945!3.31e-10!24;CL:0000826!3.31e-10!24;CL:0000219!7.11e-09!390;CL:0000625!7.55e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.94e-19;33!CL:0002057;7.94e-19;33!CL:0000576;4.36e-17;48!CL:0002087;1.17e-16;104!CL:0000473;3.56e-15;39!CL:0000234;3.56e-15;39!CL:0000766;1.95e-14;69!CL:0000542;2.75e-14;53!CL:0000738;7.16e-14;136!CL:0000084;2.04e-13;25!CL:0000791;3.50e-13;18!CL:0000789;3.50e-13;18!CL:0002419;3.50e-13;18!CL:0000945;3.48e-11;24!CL:0000988;5.63e-11;177!CL:0000763;8.05e-10;100!CL:0000625;1.87e-08;11!CL:0000081;7.71e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.54e-68,136;CL:0000037,1.95e-64,168;CL:0000988,5.02e-64,177;CL:0002032,3.56e-60,161;CL:0000837,3.56e-60,161;CL:0002087,1.41e-55,115;CL:0002031,1.90e-54,120;CL:0000766,6.40e-33,72;CL:0000763,1.06e-31,108;CL:0000049,1.06e-31,108;CL:0000557,2.09e-29,67;CL:0002009,1.22e-26,61;CL:0000839,2.55e-26,66;CL:0000542,6.59e-26,53;CL:0000051,6.59e-26,53;CL:0002194,8.21e-26,59;CL:0000576,8.21e-26,59;CL:0000040,8.21e-26,59;CL:0000559,8.21e-26,59;CL:0000838,1.15e-25,52;CL:0000860,1.31e-25,42;CL:0002057,1.31e-25,42;CL:0000473,9.14e-25,48;CL:0000234,9.14e-25,48;CL:0000134,5.40e-15,354;CL:0002320,3.42e-14,361;CL:0000084,2.08e-13,25;CL:0000827,2.08e-13,25;CL:0000791,3.57e-13,18;CL:0000789,3.57e-13,18;CL:0002420,3.57e-13,18;CL:0002419,3.57e-13,18;CL:0000790,3.57e-13,18;CL:0000219,1.24e-12,386;CL:0000945,3.54e-11,24;CL:0000826,3.54e-11,24;CL:0000625,1.90e-08,11;CL:0000081,7.84e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.63e-19;42!CL:0000051;2.75e-14;53!CL:0000790;3.50e-13;18!CL:0000049;4.05e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.45e-32!102;UBERON:0003061!5.45e-32!102;UBERON:0002193!3.62e-27!112;UBERON:0002371!1.18e-21!80;UBERON:0001474!7.23e-20!86;UBERON:0004765!9.11e-18!101;UBERON:0001434!9.11e-18!101;UBERON:0002405!6.98e-14!115;UBERON:0002384!3.95e-10!375;UBERON:0000178!1.42e-08!15;UBERON:0000179!1.42e-08!15;UBERON:0000463!1.42e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.97e-09;15!UBERON:0000179;2.97e-09;15!UBERON:0000463;2.97e-09;15!UBERON:0002390;3.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.17e-37,98;UBERON:0003061,2.17e-37,98;UBERON:0002193,3.02e-32,108;UBERON:0002371,8.37e-26,76;UBERON:0002405,2.45e-24,93;UBERON:0001474,5.82e-24,82;UBERON:0001434,1.20e-20,100;UBERON:0004765,1.77e-20,90;UBERON:0002384,1.92e-13,371;UBERON:0000178,3.06e-09,15;UBERON:0000179,3.06e-09,15;UBERON:0000463,3.06e-09,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.410623275218653,1.00434111675842,94.5233829102157,98.2744055715851,88.2347858526344,137.677496897116,190.763210854315,198.629086214526,0,0.90361775633475,0.739508020333575,2.47895041856965,58.4315545523302,30.5344456908241,108.583100072248,145.194179968383,179.467990082009,13.2110129801555,16.8424706329869,12.8787783817093,188.726913935875,186.292840238583,220.994079742101,112.495653862351,115.949344422155,94.7701494939017,153.340045107706,165.735977124328,84.6606383001135,54.4698175563857,69.7123458270532,89.3814811522656,161.511927327555,144.3673533806,90.7882877158142,103.762439513736,87.9345534188496,116.359356895426,218.031709423419,230.181060895363,198.194508997703,27.5698776697155,32.340957807395,51.6942466666327,125.624332628372,116.812173726125,82.5317609879443,27.2429776185016,22.0966581592539,28.1651524822387,33.8008458099107,58.8913910903171,31.6584554717648,16.9616233031208,11.4134438559545,7.87555374815693,67.2630075229347,49.1324192681753,39.6381213669256,40.4791362261042,38.7758413996113,32.9118423929515,37.1255293632861,28.8285110665929,36.2094037171324,25.7807500386096,33.3918814087377,64.8902784784771,113.336777548591,111.623782612567,83.2679370047863,86.3183186991565,9.2184429671277,154.220459769245,205.937639680562,222.666423416468,20.229565942272,100.384058123146,94.2161133412119,44.8101475338196,40.7762272199735,118.726180712359,89.9427612009502,47.6614800226427,46.6252403801458,59.827299877544,20.5547380754595,13.8175008892924,8.40428948631652,30.5470320113844,23.5435928718948,28.2245914273437,25.9478394777427,118.031912029392,112.022547227337,50.3509187118811,74.2257415375145,76.176764101201,78.8875196892151,54.6587682252315,63.9933055772092,52.4709051519853,86.1869197440221,105.104383605894,457.042486890468,583.554507199613,409.997887392204,0,0,0,0,0,0,0.795285947051099,0,0,0,2.28370442802128,6.48346423713678,0,0,7.46459005405772,6.79105975467142,9.04114131528283,24.3260436791449,28.5997455390064,19.3157900691374,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.9833836718678,81.4338554711483,0,0.496971951695318,0,0,0,5.67469411517371,0,0,0,0,0,0,0,0,1.87457145467037,0,1.71141546463335,1.04614076386261,3.17073146338165,3.39933183173076,4.77532742787645,7.75785850768594,6.75588745214724,19.3219210798681,14.2560342873846,1.97813543422845,0,0,2.52504170931099,4.37914819551875,13.0220134277566,4.82875382968922,1.22595118319608,3.00476117813194,0.113432183160021,5.38168907066586,5.76604949810132,0.423863802319124,6.30191301777245,2.98852334791473,2.57640540045629,4.46680455195816,1.68776332241266,1.75386609290158,2.52433774244115,3.31379635112278,0,0.710019185033229,1.61203357164224,2.37384829234683,0,2.72746120590835,0,0.487894824518382,0.265059536642971,0.464775771478074,0.829288440122964,0.756962552626885,0.36497735907583,3.12899064659632,3.21620469096443,30.3896826975457,3.71494342425583,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.95394953340702,9.27072508770766,0.614942192715568,0,0.109750285408626,0,0,0.185176890317059,6.51616610620649,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,3.93947209739836,0.702012795417713,2.37809859661965,0,2.51973192298289,0,0,0,0.383382679165211,4.92663237895944,39.9739890420046,76.7114027500857,46.9831048139294,85.5923698630856,19.7478451248646,80.2175693672383,51.5756767724207,78.6933251704444,27.1464580736774,24.3277876853573,21.1511560146628,0,0,0,0,0,0,0,0,2.57207374262142,1.41849132023278,0.799266537048298,0,0,0,0,0,0,0,0,0,21.8922805154143,9.5428847372104,6.32501818449095,9.34536936417172,21.8237678084816,0,0,0,0,45.7307387493591,482.922393254924,572.706838826878,555.211974946192,0.508189248444927,0,0,0.670065061337395,0,29.2112739339401,47.865833472644,32.3244100480108,0.981531933753119,1.00034104211935,1.08506009479894,9.77463049194793,5.88815663030634,5.51958452618771,2.57711112983969,2.40756879782175,4.5481500811197,0,1.32845119707087,2.21243002250044,0.347534457872331,1.56640925970192,0.343143423810856,140.602257763563,140.861373134557,268.206352760056,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.0920809889358963,0,0,0,0.902399225814824,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,7.00678879204511,0,0,0,0,0,0,0,0,0,0,0,2.38634556765083,0,0.165284915360978,0.384380134730212,0.382838137483752,0.6069466851333,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62357900818653,0,9.60452844109225,0,0.143411352204052,0,0,0,3.16661452946496,0,1.89736586882858,3.14941248220485,0.384888450902048,4.69211592875051,4.3556393944529,5.74277184738353,0,0,0,0,36.028780255484,46.6428696356849,65.5094265250287,61.9402616190251,47.3066614049123,33.7206121820213,35.1020434204775,67.415639985013,0,0,6.37104561550682,12.8204190836746,0,0.35570921674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| |||
|short_description=p1@RUNX3 | |||
}} |
Revision as of 04:52, 12 September 2013
Short description: | p1@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RUNX3_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 0bp_to_ENST00000428150, NM_004350, uc001bjq.2, uc010oen.1_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | E9PH34Q13761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.17e-37 | 98 |
blood island | 2.17e-37 | 98 |
hemolymphoid system | 3.02e-32 | 108 |
bone marrow | 8.37e-26 | 76 |
immune system | 2.45e-24 | 93 |
bone element | 5.82e-24 | 82 |
skeletal system | 1.20e-20 | 100 |
skeletal element | 1.77e-20 | 90 |
connective tissue | 1.92e-13 | 371 |
blood | 3.06e-09 | 15 |
haemolymphatic fluid | 3.06e-09 | 15 |
organism substance | 3.06e-09 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.