FFCP PHASE1:Hg19::chr1:2985760..2985774,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=63976|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14000|TSSclassifier=S|UniProt=Q9HAZ2,D6RFY3|association_with_transcript=0bp_to_ENST00000270722,ENST00000378391,ENST00000514189_5end|description=CAGE_peak_1_at_PRDM16_5end|id=chr1:2985760..2985774,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000138;2.81e-07;6|ontology_enrichment_celltype_v019_2=CL:0000058,3.88e-07,6;CL:0000138,3.88e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.28e-30!115;UBERON:0005743!2.50e-28!86;UBERON:0001049!8.27e-26!57;UBERON:0005068!8.27e-26!57;UBERON:0006241!8.27e-26!57;UBERON:0007135!8.27e-26!57;UBERON:0001017!2.35e-25!82;UBERON:0000073!4.20e-25!94;UBERON:0001016!4.20e-25!94;UBERON:0003075!5.24e-24!86;UBERON:0007284!5.24e-24!86;UBERON:0002616!4.37e-23!59;UBERON:0002346!2.61e-22!90;UBERON:0000955!1.01e-21!69;UBERON:0006238!1.01e-21!69;UBERON:0003080!1.38e-21!42;UBERON:0001893!3.03e-21!34;UBERON:0002780!3.57e-21!41;UBERON:0001890!3.57e-21!41;UBERON:0006240!3.57e-21!41;UBERON:0002020!7.35e-21!34;UBERON:0003528!7.35e-21!34;UBERON:0002791!1.30e-20!33;UBERON:0001869!3.33e-20!32;UBERON:0003056!7.15e-18!61;UBERON:0000956!1.54e-16!25;UBERON:0000203!1.54e-16!25;UBERON:0000033!4.13e-15!123;UBERON:0000153!6.20e-15!129;UBERON:0007811!6.20e-15!129;UBERON:0002619!5.03e-14!22;UBERON:0001950!1.17e-12!20;UBERON:0004121!4.30e-12!169;UBERON:0000481!8.39e-12!347;UBERON:0000924!1.78e-11!173;UBERON:0006601!1.78e-11!173;UBERON:0000475!7.02e-11!365;UBERON:0000025!2.45e-09!194;UBERON:0004111!1.23e-07!241;UBERON:0000477!3.81e-07!286;UBERON:0001871!7.18e-07!7|ontology_enrichment_uberon_v019=UBERON:0001893;4.15e-27;34!UBERON:0001869;5.01e-27;32!UBERON:0003528;7.95e-27;34!UBERON:0002020;7.95e-27;34!UBERON:0002791;1.16e-26;32!UBERON:0000956;1.43e-25;25!UBERON:0000203;1.43e-25;25!UBERON:0002619;1.38e-21;22!UBERON:0002780;4.60e-21;41!UBERON:0001890;4.60e-21;41!UBERON:0001950;1.83e-19;20!UBERON:0000073;4.47e-19;53!UBERON:0002616;4.47e-19;53!UBERON:0001017;9.54e-13;75!UBERON:0000955;6.02e-12;68!UBERON:0001016;2.53e-10;83!UBERON:0007023;9.40e-10;114!UBERON:0001871;8.20e-09;6!UBERON:0002420;1.47e-07;9!UBERON:0007245;1.47e-07;9!UBERON:0010009;1.47e-07;9!UBERON:0010011;1.47e-07;9!UBERON:0000454;1.47e-07;9!UBERON:0002108;2.56e-07;4!UBERON:0000349;5.09e-07;5!UBERON:0000200;5.93e-07;6!UBERON:0000125;7.27e-07;9!UBERON:0002308;7.27e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.10e-33,56;UBERON:0005068,4.10e-33,56;UBERON:0006241,4.10e-33,56;UBERON:0007135,4.10e-33,56;UBERON:0000073,1.15e-32,53;UBERON:0002616,1.15e-32,53;UBERON:0001017,1.43e-32,81;UBERON:0007023,3.00e-32,114;UBERON:0001893,1.68e-31,34;UBERON:0003075,2.93e-31,82;UBERON:0007284,2.93e-31,82;UBERON:0003528,6.62e-31,34;UBERON:0002020,6.62e-31,34;UBERON:0001869,7.39e-30,32;UBERON:0002780,1.45e-29,41;UBERON:0001890,1.45e-29,41;UBERON:0003080,1.45e-29,41;UBERON:0006240,1.45e-29,41;UBERON:0002791,1.91e-29,32;UBERON:0002346,5.98e-29,86;UBERON:0001016,1.26e-28,89;UBERON:0000955,3.54e-27,68;UBERON:0006238,3.54e-27,68;UBERON:0000956,1.42e-25,25;UBERON:0000203,1.42e-25,25;UBERON:0003056,1.17e-24,61;UBERON:0002619,1.37e-21,22;UBERON:0010371,7.55e-21,104;UBERON:0001950,1.98e-19,20;UBERON:0010314,4.58e-18,132;UBERON:0011216,1.32e-14,223;UBERON:0004121,2.12e-13,171;UBERON:0000924,2.12e-13,171;UBERON:0006601,2.12e-13,171;UBERON:0000025,4.46e-10,192;UBERON:0001871,7.77e-09,6;UBERON:0002420,1.10e-07,9;UBERON:0007245,1.10e-07,9;UBERON:0010009,1.10e-07,9;UBERON:0010011,1.10e-07,9;UBERON:0000454,1.10e-07,9;UBERON:0002108,2.14e-07,4;UBERON:0000349,4.36e-07,5;UBERON:0000200,5.37e-07,6;UBERON:0004111,5.77e-07,240;UBERON:0000125,5.98e-07,9;UBERON:0002308,5.98e-07,9|phase1_expression=0.363356758541113,0,0,0,0,0,2.53299878168311,0,0,1.72013755551056,2.79120467188971,0,0,0.74259811776028,0.662794751455832,0,0,0,0,2.83178433576612,0.816002764977012,2.82109249330279,32.6309025329405,17.1093031341105,21.7188766499009,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,1.68152568894461,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,1.0843174571537,6.51739283826656,2.60723734129483,6.36228757640879,2.43317435151318,0.0945348171640679,0,0.087834785693126,3.86388272718252,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,1.64619665163954,0.794455084879313,1.14734648299525,0,0.560677600142307,0,0.74000264525148,0,0,0,2.4217188423189,0,0.468642863667593,0,0,0,0,0.161872944368132,0,0,0,0.309977343527296,0,0.247266929278557,0.910161361938026,0,0.673344455816265,0.875829639103749,0,0,0.612975591598039,0.751190294532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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=63976 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14000 | |||
|TSSclassifier=S | |||
|UniProt=Q9HAZ2,D6RFY3 | |||
|association_with_transcript=0bp_to_ENST00000270722,ENST00000378391,ENST00000514189_5end | |||
|description=CAGE_peak_1_at_PRDM16_5end | |||
|id=chr1:2985760..2985774,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.81e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.88e-07,6;CL:0000138,3.88e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@PRDM16 | |||
}} |
Revision as of 05:11, 12 September 2013
Short description: | p1@PRDM16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRDM16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000270722, ENST00000378391, ENST00000514189_5end |
EntrezGene: | PRDM16 |
HGNC: | 14000 |
UniProt: | Q9HAZ2D6RFY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.88e-07 | 6 |
chondrocyte | 3.88e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.