FFCP PHASE1:Hg19::chr1:2487562..2487573,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8764|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11912|TSSclassifier=S|UniProt=B9A034|association_with_transcript=-87bp_to_ENST00000409119_5end|coexpression_cluster_id=C806|description=CAGE_peak_8_at_TNFRSF14_5end|id=chr1:2487562..2487573,+|ontology_enrichment_celltype=CL:0000738!1.13e-55!140;CL:0002031!2.56e-48!124;CL:0002087!3.49e-48!119;CL:0000037!1.50e-47!172;CL:0000566!1.50e-47!172;CL:0000988!2.13e-47!182;CL:0002032!3.83e-46!165;CL:0000837!3.83e-46!165;CL:0000766!5.07e-38!76;CL:0000557!1.36e-35!71;CL:0000839!9.22e-35!70;CL:0002194!6.10e-34!63;CL:0000576!6.10e-34!63;CL:0000040!6.10e-34!63;CL:0000559!6.10e-34!63;CL:0002009!6.46e-34!65;CL:0002057!1.67e-32!42;CL:0000763!2.05e-30!112;CL:0000049!2.05e-30!112;CL:0000860!3.18e-29!45;CL:0000542!9.80e-14!53;CL:0000051!9.80e-14!53;CL:0000838!2.27e-13!52;CL:0000219!2.12e-10!390;CL:0000134!4.73e-10!358;CL:0002320!5.29e-10!365;CL:0000945!3.53e-07!24;CL:0000826!3.53e-07!24|ontology_enrichment_celltype_v019=CL:0000860;5.58e-51;33!CL:0002057;5.58e-51;33!CL:0000473;2.01e-46;39!CL:0000234;2.01e-46;39!CL:0000576;1.67e-33;48!CL:0000766;2.18e-25;69!CL:0000148;2.75e-14;10!CL:0000763;5.12e-14;100!CL:0000738;7.04e-12;136!CL:0002087;2.52e-11;104!CL:0002567;4.97e-10;3!CL:0000147;7.66e-10;14!CL:0002619;2.56e-09;3!CL:0000840;7.70e-08;5!CL:0000235;1.03e-07;6!CL:0000988;3.01e-07;177|ontology_enrichment_celltype_v019_2=CL:0000766,8.90e-67,72;CL:0000557,1.37e-65,67;CL:0000839,1.31e-63,66;CL:0002009,1.06e-62,61;CL:0002194,6.52e-62,59;CL:0000576,6.52e-62,59;CL:0000040,6.52e-62,59;CL:0000559,6.52e-62,59;CL:0000473,2.67e-55,48;CL:0000234,2.67e-55,48;CL:0000860,7.72e-49,42;CL:0002057,7.72e-49,42;CL:0000763,1.21e-44,108;CL:0000049,1.21e-44,108;CL:0000738,8.07e-42,136;CL:0002031,8.17e-41,120;CL:0002087,3.97e-37,115;CL:0002032,2.98e-33,161;CL:0000837,2.98e-33,161;CL:0000037,8.96e-33,168;CL:0000988,7.50e-32,177;CL:0000148,2.85e-14,10;CL:0000541,2.85e-14,10;CL:0000219,3.16e-12,386;CL:0002567,5.29e-10,3;CL:0000147,7.85e-10,14;CL:0002619,2.46e-09,3;CL:0000134,2.55e-09,354;CL:0002320,6.75e-09,361;CL:0000840,8.68e-08,5;CL:0001029,8.68e-08,5;CL:0000235,1.13e-07,6|ontology_enrichment_development_v019=CL:0002057;4.54e-36;42!CL:0000049;5.70e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.56e-38!102;UBERON:0003061!5.56e-38!102;UBERON:0002193!9.22e-38!112;UBERON:0002371!3.12e-30!80;UBERON:0001474!1.16e-28!86;UBERON:0002405!1.68e-24!115;UBERON:0004765!1.10e-22!101;UBERON:0001434!1.10e-22!101;UBERON:0003081!9.69e-11!216;UBERON:0002384!3.48e-09!375;UBERON:0002204!3.93e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.63e-56,76;UBERON:0002390,2.02e-52,98;UBERON:0003061,2.02e-52,98;UBERON:0001474,1.47e-51,82;UBERON:0002193,2.00e-46,108;UBERON:0002405,2.49e-46,93;UBERON:0004765,5.65e-46,90;UBERON:0001434,3.05e-40,100;UBERON:0003081,4.32e-21,203;UBERON:0002204,1.48e-19,167;UBERON:0000926,2.94e-09,315;UBERON:0004120,2.94e-09,315;UBERON:0006603,2.94e-09,315;UBERON:0002384,2.53e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.61130724598361,0.492603536699674,0.236132343941038,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,0,0.284338464974843,0,0,1.60435557976113,0.868043482863407,4.92614043327834,4.85840499028469,5.92423805558629,1.30858414901608,0.755751887377619,1.4555043671269,3.48643555358527,11.5127008646111,9.60089749774821,2.3015391385772,2.81776777182011,1.89185783910868,7.23965929546899,10.3277549373412,13.5426486594342,1.50593871634084,6.5497476013883,3.59557575112135,4.89734227793444,6.73950956859797,5.75403413219137,0.329851300186716,1.59570926097305,0.852449501065388,4.35313857942876,11.3477044938228,4.9825779919646,2.76373531782418,5.73631210262222,3.25783267057675,1.81619850790011,9.57521853567668,6.64571013625857,0.633765858935825,0.425208599930087,0.419317291016752,0.44931452458598,0.750884464207532,0,0,0.99458338599545,1.64397738388171,0,0,0,0.853460445133014,0,0.574752439954483,1.32208974556972,0.954053754535364,1.70763890732835,1.17447437874188,1.52909291250092,0,0,0,0.393419540227666,0,0.822405995998037,1.17030546773475,0.651844533267181,0,0,0.445641827540694,0,0.664601683750863,0.270803863765016,0.640456598628376,1.43065282315866,0.986627427622057,1.65810010671509,1.15921234294021,0.14828656316206,0,1.04535523804977,0.566546713487831,0.766440987203842,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.752875595388864,0.511946444617674,0,0.710331756132051,0,0.201606743224732,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,7.46459005405772,6.79105975467142,6.51494006542439,0.476981248610684,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0.44905874525234,0.112611480483322,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |||
|TSSclassifier=S | |||
|UniProt=B9A034 | |||
|association_with_transcript=-87bp_to_ENST00000409119_5end | |||
|coexpression_cluster_id=C806 | |||
|description=CAGE_peak_8_at_TNFRSF14_5end | |||
|id=chr1:2487562..2487573,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.13e-55!140;CL:0002031!2.56e-48!124;CL:0002087!3.49e-48!119;CL:0000037!1.50e-47!172;CL:0000566!1.50e-47!172;CL:0000988!2.13e-47!182;CL:0002032!3.83e-46!165;CL:0000837!3.83e-46!165;CL:0000766!5.07e-38!76;CL:0000557!1.36e-35!71;CL:0000839!9.22e-35!70;CL:0002194!6.10e-34!63;CL:0000576!6.10e-34!63;CL:0000040!6.10e-34!63;CL:0000559!6.10e-34!63;CL:0002009!6.46e-34!65;CL:0002057!1.67e-32!42;CL:0000763!2.05e-30!112;CL:0000049!2.05e-30!112;CL:0000860!3.18e-29!45;CL:0000542!9.80e-14!53;CL:0000051!9.80e-14!53;CL:0000838!2.27e-13!52;CL:0000219!2.12e-10!390;CL:0000134!4.73e-10!358;CL:0002320!5.29e-10!365;CL:0000945!3.53e-07!24;CL:0000826!3.53e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.58e-51;33!CL:0002057;5.58e-51;33!CL:0000473;2.01e-46;39!CL:0000234;2.01e-46;39!CL:0000576;1.67e-33;48!CL:0000766;2.18e-25;69!CL:0000148;2.75e-14;10!CL:0000763;5.12e-14;100!CL:0000738;7.04e-12;136!CL:0002087;2.52e-11;104!CL:0002567;4.97e-10;3!CL:0000147;7.66e-10;14!CL:0002619;2.56e-09;3!CL:0000840;7.70e-08;5!CL:0000235;1.03e-07;6!CL:0000988;3.01e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.90e-67,72;CL:0000557,1.37e-65,67;CL:0000839,1.31e-63,66;CL:0002009,1.06e-62,61;CL:0002194,6.52e-62,59;CL:0000576,6.52e-62,59;CL:0000040,6.52e-62,59;CL:0000559,6.52e-62,59;CL:0000473,2.67e-55,48;CL:0000234,2.67e-55,48;CL:0000860,7.72e-49,42;CL:0002057,7.72e-49,42;CL:0000763,1.21e-44,108;CL:0000049,1.21e-44,108;CL:0000738,8.07e-42,136;CL:0002031,8.17e-41,120;CL:0002087,3.97e-37,115;CL:0002032,2.98e-33,161;CL:0000837,2.98e-33,161;CL:0000037,8.96e-33,168;CL:0000988,7.50e-32,177;CL:0000148,2.85e-14,10;CL:0000541,2.85e-14,10;CL:0000219,3.16e-12,386;CL:0002567,5.29e-10,3;CL:0000147,7.85e-10,14;CL:0002619,2.46e-09,3;CL:0000134,2.55e-09,354;CL:0002320,6.75e-09,361;CL:0000840,8.68e-08,5;CL:0001029,8.68e-08,5;CL:0000235,1.13e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.54e-36;42!CL:0000049;5.70e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.56e-38!102;UBERON:0003061!5.56e-38!102;UBERON:0002193!9.22e-38!112;UBERON:0002371!3.12e-30!80;UBERON:0001474!1.16e-28!86;UBERON:0002405!1.68e-24!115;UBERON:0004765!1.10e-22!101;UBERON:0001434!1.10e-22!101;UBERON:0003081!9.69e-11!216;UBERON:0002384!3.48e-09!375;UBERON:0002204!3.93e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.63e-56,76;UBERON:0002390,2.02e-52,98;UBERON:0003061,2.02e-52,98;UBERON:0001474,1.47e-51,82;UBERON:0002193,2.00e-46,108;UBERON:0002405,2.49e-46,93;UBERON:0004765,5.65e-46,90;UBERON:0001434,3.05e-40,100;UBERON:0003081,4.32e-21,203;UBERON:0002204,1.48e-19,167;UBERON:0000926,2.94e-09,315;UBERON:0004120,2.94e-09,315;UBERON:0006603,2.94e-09,315;UBERON:0002384,2.53e-08,371 | |||
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| |||
|short_description=p8@TNFRSF14 | |||
}} |
Revision as of 04:49, 12 September 2013
Short description: | p8@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TNFRSF14_5end |
Coexpression cluster: | C806_Melanocyte_CD14_Monocytederived_Macrophage_granulocyte_Mast_Eosinophils |
Association with transcript: | -87bp_to_ENST00000409119_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | B9A034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.63e-56 | 76 |
hematopoietic system | 2.02e-52 | 98 |
blood island | 2.02e-52 | 98 |
bone element | 1.47e-51 | 82 |
hemolymphoid system | 2.00e-46 | 108 |
immune system | 2.49e-46 | 93 |
skeletal element | 5.65e-46 | 90 |
skeletal system | 3.05e-40 | 100 |
lateral plate mesoderm | 4.32e-21 | 203 |
musculoskeletal system | 1.48e-19 | 167 |
mesoderm | 2.94e-09 | 315 |
mesoderm-derived structure | 2.94e-09 | 315 |
presumptive mesoderm | 2.94e-09 | 315 |
connective tissue | 2.53e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.