NonredundantMotifs:62

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant62
• db :HOCOMOCO
• Id :MTF1_f1
• name  :
• score :0.7983217808413842
  
• External refs:

EntrezGene:4520
UniProt:4520

• Internal refs:

EntrezGene:4520

Motif matrix

P0 A C G T 1 15.421548117154835 12.053347280334753 3.873430962343097 3.6809623430962524 2 4.715481171548134 2.309623430962344 28.004184100418456 0.0 3 3.271966527196655 0.9623430962343115 13.28033472803348 17.51464435146445 4 7.506276150627611 5.966527196652714 20.882845188284534 0.6736401673640163 5 7.602510460251052 18.958158995815907 1.5397489539748983 6.9288702928870425 6 2.9832635983263636 29.640167364016758 0.8661087866108785 1.5397489539748983 7 0.0 0.0 35.0292887029289 0.0 8 3.368200836820088 0.8661087866108785 4.523012552301255 26.271966527196675 9 0.0 0.9623430962343115 34.06694560669461 0.0 10 0.0 11.451882845188297 0.0 23.577405857740604 11 0.0 0.0 35.0292887029289 0.0 12 0.0 34.16317991631805 0.0 0.8661087866108785 13 35.0292887029289 0.0 0.0 0.0 14 18.669456066945624 4.33054393305441 6.255230125523033 5.774058577405869 15 22.133891213389145 9.527196652719676 1.8284518828451901 1.5397489539748983 16 14.338912133891215 3.656903765690366 10.297071129707124 6.736401673640163 17 4.186192468619268 15.25313807531384 10.92259414225943 4.667364016736397