NonredundantMotifs:8

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant8
• db :HOCOMOCO
• Id :OTX2_si
• name  :
• score :0.21470130889751804
  
• External refs:

EntrezGene:5015
UniProt:5015

• Internal refs:

EntrezGene:5015

Motif matrix

P0 A C G T 1 3.6017786561264824 2.5345849802371596 10.965415019762863 7.76383399209487 2 7.683794466403187 5.015810276679856 2.9881422924901133 9.177865612648244 3 5.869565217391324 2.027667984189728 7.8972332015810425 9.071146245059317 4 13.873517786561292 7.043478260869574 3.9486166007905337 0.0 5 10.778656126482229 3.9486166007905337 2.9881422924901133 7.1501976284585265 6 6.936758893280646 5.9762845849802515 9.924901185770786 2.027667984189728 7 1.9209486166007959 3.9486166007905337 17.928853754940754 1.06719367588933 8 2.9881422924901133 0.0 21.877470355731262 0.0 9 23.79841897233208 1.06719367588933 0.0 0.0 10 0.0 0.0 0.0 24.8656126482214 11 0.9604743083003979 0.0 0.0 23.905138339921006 12 24.8656126482214 0.0 0.0 0.0 13 12.166007905138358 2.13438735177866 8.644268774703583 1.9209486166007959 14 11.739130434782624 3.9486166007905337 5.9762845849802515 3.201581027667993 15 4.162055335968388 3.9486166007905337 8.537549407114655 8.217391304347847