NonredundantMotifs:9

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant9
• db :HOCOMOCO
• Id :HXB6_f1
• name  :
• score :0.1272361452579038
  
• External refs:

EntrezGene:3216
UniProt:3216

• Internal refs:

EntrezGene:3216

Motif matrix

P0 A C G T 1 3.316599268208527 0.6334510812635019 1.5718971275798 1.478052522948169 2 3.472250371370305 0.844601441684672 0.0 2.683148186945023 3 0.0 0.844601441684672 0.0 6.155398558315335 4 0.844601441684672 0.0 6.155398558315335 0.0 5 7.0 0.0 0.0 0.0 6 0.0 0.0 0.0 7.0 7 0.0 0.0 0.0 7.0 8 0.844601441684672 0.0 3.527749628629695 2.62764892968564 9 6.155398558315335 0.0 0.844601441684672 0.0 10 0.0 0.0 0.0 7.0 11 0.0 0.0 6.155398558315335 0.844601441684672 12 3.472250371370305 3.527749628629695 0.0 0.0 13 3.527749628629695 1.783047488000968 0.844601441684672 0.844601441684672