NonredundantMotifs:81

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known81
• db :HOCOMOCO
• Id :NRF1_f1
• name  :
• score :2.270786702393942
  
• External refs:

EntrezGene:4899
UniProt:4899

• Internal refs:

EntrezGene:4899

Motif matrix

P0 A C G T 1 459.6482378837819 96.09477677343197 1224.895759227304 59.3612261154826 2 228.7356565278479 1341.176072363288 159.73544651862176 110.35282459023995 3 142.8897989358737 70.92582738783271 1560.4967811010458 65.68759257525049 4 12.496929952152906 1613.359009101849 181.371187642889 32.77287330311234 5 1640.3642566894364 75.30574133333585 89.0022614295485 35.3277405476823 6 197.13822138306224 233.22683148024367 526.6178427595805 883.0171043771117 7 45.44509022654141 34.812190632164445 1505.2169955028444 254.52572363845113 8 54.06734515039869 1672.1027634923753 41.679315506862444 72.15057585036644 9 34.358506706508805 117.02377717706426 1535.2496669117772 153.36804920465113 10 91.63610232054292 1587.7746509665565 158.47549205928038 2.113754653623224 11 1344.8979947205348 151.74442282809497 300.41001415233774 42.94756829903626 12 278.0654036310247 391.337742417677 989.0245281868343 181.572325764463