NonredundantMotifs:199

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known199
• db :UNIPROBE
• Id :Glis2_secondary
• name :SCI09
• score :0.020725320147180586
  
• External refs:

EntrezGene:84662
UniProt:84662

• Internal refs:

EntrezGene:84662

Motif matrix

P0 A C G T 1 0.365754619760466 0.22578180422754 0.0918707684837937 0.316592807528201 2 0.343299407173213 0.160876466891729 0.206970590293001 0.288853535642058 3 0.060678740322344 0.0720384060088542 0.0923078851174174 0.774974968551384 4 0.713491287041738 0.0633502876213121 0.137042362060149 0.0861160632768002 5 0.174542155020481 0.0880945132460679 0.0947438156190423 0.642619516114408 6 0.0970262867149638 0.0850268208808856 0.139474528872432 0.678472363531718 7 0.710084071636598 0.072722936094092 0.128873361339213 0.0883196309300972 8 0.369668653279851 0.182092059398416 0.12749989228392 0.320739395037813 9 0.181161548700691 0.145491237836238 0.0936885553257558 0.579658658137315 10 0.7103075955177 0.0674072228705173 0.0546475897042765 0.167637591907506 11 0.679811938701058 0.0582283690128381 0.0897733780767608 0.172186314209343 12 0.705700419598604 0.167070178818269 0.0338928988941205 0.0933365026890068 13 0.217869106188728 0.162330963963293 0.460989295943543 0.158810633904437 14 0.412095106912456 0.213864676100769 0.22017435641817 0.153865860568606