NonredundantMotifs:122: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=-
|motif_cluster_2013_march_motif_members= /SWISSREGULON:EWSR1-FLI1.p2 /JASPAR:MA0149.1;EWSR1-FLI1
|name=known122
|representative_motif_db=...") |
No edit summary |
||
Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|entrez_gene_id=- | |entrez_gene_id=- | ||
|motif_cluster_2013_march_motif_members= | |motif_cluster_2013_march_motif_members= /JASPAR:MA0149.1;EWSR1-FLI1 /SWISSREGULON:EWSR1-FLI1.p2 | ||
|name=known122 | |name=known122 | ||
|representative_motif_db=JASPAR | |representative_motif_db=JASPAR |
Revision as of 16:20, 1 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known122
- db :JASPAR
- Id :MA0149.1
- name :EWSR1-FLI1
- score :0.050506215753953636
- External refs:
- Internal refs:
Motif matrix | |
---|---|
|
Sub Motif Members