MCL coexpression mm9:2986: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{MCL_coexpression_mm9 | {{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0,0,0,0,0,0.0224659834789971,0,0.640203088609825,0.485748030188608,0.28737946197924,0.108141621844673,0.0428582347358579,0.114035908254986,0.127176827377525,0,0.0492203446520353,0,0.0212025644513176,0.0536838705987272,0,0.0118156885495894,0,0,0.0716119405936067,0.0546670935592277,0,0,0,0,0,0.0919179859481407,0,0,0,0,0,0,0,0,0,0.066971267341783,0,0,0,0,0,0,0,0,0,0,0,0.256217366871516,0.864262759386327,0.425460236211754,0,0,0,0,0,0,0,0,0.0537843279881687,0,0.077706009897872,0.0379365798684957,0.0470681960614343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0204153281004931,0,0.198582584603541,0,0,0,0,0,0,0,0,0,0.0190753472649188,0,0,0,0,0.0326919279347937,0,0.0156522902305435,0.135719170972313,0,0,0,0,0.02032355265126,0,0,0.0319781166213046,0.0195511658563466,0,0.0217063266948359,0.052956596168637,0,0.152320173412856,0,0,0.0329339538696473,0.468861740792361,0.268700254536461,0.309003808600736,0,0,0,0,0,0,0,0,0.0169745097646989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295097708601511,0.0932602961681968,0.158515636472714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.033967285130882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.026833566425996,0,0,0,0,0,0,0,0,0,0,0,0.0312779250205647,0,0,0.0217522219232226,0,0,0,0,0,0,0,0.0245426289303509,0,0,0,0,0,0,0,0,0,0,0,0.0230604544473183,0,0.133104146281952,0.106563752628775,0,0,0,0.0160451566633019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0221049291708803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0239681640494532,0,0,0,0,0,0.038477471376504,0,0,0,0,0,0,0,0,0.0370293221228937,0,0,0,0,0,0,0.125079054408396,0.799195440234514,0.970091454473967,0.629726061975799,0,0,0,0,0,0,0,0,0,0,0.069957971098037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0599993818810313,0.083434692829602,0.0238412128518329,0,0,0,0.0139246949329419,0.0298059097072022,0.0139062504973587,0.0371293640201177,0.0132981630510481,0.0160017698361234,0,0,0,0,0,0.0461393176027847,0.0243468014251482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0275488346793605,0,0,0,0.040292085331151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0281767281764315,0.065655825495796,0,0|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0.664214338129335,0.381636141962868,0.231008947931991,0.127893569522672,0.0642873521037868,0,0.0699790221274244,0,0,0,0,0.0558041721483835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673620022139481,0.876694568058672,0.428210788219066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198582584603541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264512262907024,0.204093579732844,0.140259928189304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231013950740173,0.0994554632344034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760376943436681,1.03328707850495,0.621030737309247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=CL:0000791!1.37e-32!9;CL:0000789!1.37e-32!9;CL:0002420!1.37e-32!9;CL:0002419!1.37e-32!9;CL:0000790!1.37e-32!9;CL:0000988!2.13e-30!32;CL:0002032!2.13e-30!32;CL:0000037!2.13e-30!32;CL:0000566!2.13e-30!32;CL:0000837!2.13e-30!32;CL:0000838!2.19e-30!12;CL:0000624!4.47e-28!8;CL:0000542!5.80e-28!13;CL:0000051!5.80e-28!13;CL:0000084!1.65e-26!11;CL:0000827!1.65e-26!11;CL:0002320!1.68e-23!46;CL:0000134!1.68e-23!46;CL:0002242!1.65e-22!16;CL:0000738!4.06e-21!17;CL:0002087!4.06e-21!17;CL:0000219!1.12e-19!54;CL:0000893!5.84e-19!6;CL:0002489!5.84e-19!6;CL:0000898!5.84e-19!6;CL:0000809!5.84e-19!6;CL:0000810!5.84e-19!6;CL:0000895!5.84e-19!6;CL:0000808!5.84e-19!6;CL:0000894!5.84e-19!6;CL:0000806!5.84e-19!6;CL:0000807!5.84e-19!6;CL:0000805!5.84e-19!6;CL:0002425!5.84e-19!6;CL:0002436!5.84e-19!6;CL:0002427!5.84e-19!6;CL:0002428!5.84e-19!6;CL:0002429!5.84e-19!6;CL:0002433!5.84e-19!6;CL:0002431!5.84e-19!6;CL:0002432!5.84e-19!6;CL:0002031!3.71e-17!25;CL:0000034!4.97e-15!97;CL:0000723!1.09e-10!91;CL:0000048!1.09e-10!91;CL:0000049!2.68e-08!19;CL:0000548!6.24e-08!115;CL:0000255!6.24e-08!115;CL:0002371!1.15e-07!118|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0002384!1.68e-23!46|tfbs_overrepresentation_for_novel_motifs=0.752782,0.564138,0.722405,1.87917,0.587814,0.81763,0.919454,0.467321,1.20566,0.235304,0.870507,0.906098,0.467629,0.933025,0.608226,0,1.14208,0.578045,0.448066,0.876292,0.679146,0.275782,0.932027,0.585919,0.731217,0.963352,0.437236,0.841386,0.64294,0.380786,0.825437,1.24901,0.575271,0.411696,0.608816,0.444545,0.563758,0.902078,0.536514,0.50014,0.582863,0.831295,0.724277,0.610669,0.156582,0.788421,1.05665,0.859154,0.663409,0.646474,1.12346,0.99279,0.971403,1.3966,1.41464,0.940919,0.657156,0.891887,0.425455,0.938668,1.22795,1.00308,0.494668,1.11142,0.953187,1.15459,1.55483,1.90983,1.22303,1.7608,0.700291,0.474956,0.284975,1.44925,0.416814,0.402065,0.411601,1.04436,1.20986,1.63704,0.476502,1.16055,1.00151,0.459035,1.32978,0.181575,0.195254,0.380977,1.06194,2.07346,1.62608,1.33496,2.81786,0.595071,0.531443,0.509215,1.17262,1.26539,1.05692,2.50519,0.563856,1.24872,1.37854,1.12409,1.12297,0.830796,1.18646,0.854628,0.689894,0.681267,0.744607,1.38039,0.685481,0.876299,1.63327,0.580657,0.212464,0.805461,1.14346,0.559153,1.45481,1.08896,0.965352,1.04338,1.68841,1.21376,0.928483,1.25534,1.55328,0.598722,1.36093,0.792832,1.52297,0.955954,1.65529,0.751419,0.762499,0.832891,1.60513,2.44352,2.04137,1.55966,0.978551,1.26,1.11604,0.831808,1.06002,2.40374,0.765221,0.589976,0.38417,0.260379,1.39822,0.516739,0.954936,1.48249,0.993889,0.622823,0.749933,0.762177,1.61484,1.32889,1.21423,0.741984,1.11251,0.94678,0.562367,0.904334,0.135528|tfbs_overrepresentation_jaspar=MA0003.1;0.245953,MA0004.1;0.801718,MA0006.1;0.60285,MA0007.1;0.784593,MA0009.1;1.27673,MA0014.1;0.133574,MA0017.1;0.635031,MA0019.1;1.08369,MA0024.1;1.23079,MA0025.1;1.51835,MA0027.1;2.9431,MA0028.1;0.61552,MA0029.1;1.20789,MA0030.1;1.21482,MA0031.1;1.17722,MA0038.1;0.963265,MA0040.1;1.28983,MA0041.1;0.714279,MA0042.1;0.69885,MA0043.1;1.3775,MA0046.1;1.31428,MA0048.1;0.353763,MA0050.1;0.845669,MA0051.1;0.973068,MA0052.1;1.29825,MA0055.1;0.190475,MA0056.1;0,MA0057.1;0.337566,MA0058.1;0.690848,MA0059.1;0.705317,MA0060.1;0.502699,MA0061.1;0.5406,MA0063.1;0,MA0066.1;0.951196,MA0067.1;1.63197,MA0068.1;0.343188,MA0069.1;1.29861,MA0070.1;1.28847,MA0071.1;0.844726,MA0072.1;1.2796,MA0073.1;0.00834468,MA0074.1;0.911576,MA0076.1;0.657929,MA0077.1;1.2569,MA0078.1;1.0091,MA0081.1;0.732313,MA0083.1;1.37668,MA0084.1;1.96428,MA0087.1;1.33189,MA0088.1;0.27999,MA0089.1;0,MA0090.1;0.762482,MA0091.1;0.816659,MA0092.1;0.762845,MA0093.1;0.62555,MA0095.1;0,MA0098.1;0,MA0100.1;0.89873,MA0101.1;1.70277,MA0103.1;0.647985,MA0105.1;1.04599,MA0106.1;1.01755,MA0107.1;0.640607,MA0108.2;1.10817,MA0109.1;0,MA0111.1;0.778753,MA0113.1;0.986839,MA0114.1;0.537669,MA0115.1;1.38041,MA0116.1;0.602598,MA0117.1;1.34691,MA0119.1;0.716476,MA0122.1;1.36752,MA0124.1;1.57762,MA0125.1;1.5017,MA0130.1;0,MA0131.1;1.07881,MA0132.1;0,MA0133.1;0,MA0135.1;1.4152,MA0136.1;0.933582,MA0139.1;0.462282,MA0140.1;0.898603,MA0141.1;0.671467,MA0142.1;1.16183,MA0143.1;1.00467,MA0144.1;1.33779,MA0145.1;0.292366,MA0146.1;0.151124,MA0147.1;0.556853,MA0148.1;0.820161,MA0149.1;0.722227,MA0062.2;0.412742,MA0035.2;0.903829,MA0039.2;0.0481552,MA0138.2;1.07027,MA0002.2;1.17677,MA0137.2;0.668025,MA0104.2;0.48458,MA0047.2;0.962424,MA0112.2;0.29236,MA0065.2;0.292912,MA0150.1;0.784464,MA0151.1;0,MA0152.1;0.962542,MA0153.1;1.43238,MA0154.1;0.35067,MA0155.1;0.312898,MA0156.1;1.58027,MA0157.1;1.12772,MA0158.1;0,MA0159.1;0.569393,MA0160.1;0.823568,MA0161.1;0,MA0162.1;0.166722,MA0163.1;0.157796,MA0164.1;0.933981,MA0080.2;0.64167,MA0018.2;0.944669,MA0099.2;1.06348,MA0079.2;0.00937321,MA0102.2;2.01714,MA0258.1;0.520639,MA0259.1;0.543506,MA0442.1;0}} | ||
|coexpression_dpi_cluster_scores_mean=0,0,0,0,0,0.0224659834789971,0,0.640203088609825,0.485748030188608,0.28737946197924,0.108141621844673,0.0428582347358579,0.114035908254986,0.127176827377525,0,0.0492203446520353,0,0.0212025644513176,0.0536838705987272,0,0.0118156885495894,0,0,0.0716119405936067,0.0546670935592277,0,0,0,0,0,0.0919179859481407,0,0,0,0,0,0,0,0,0,0.066971267341783,0,0,0,0,0,0,0,0,0,0,0,0.256217366871516,0.864262759386327,0.425460236211754,0,0,0,0,0,0,0,0,0.0537843279881687,0,0.077706009897872,0.0379365798684957,0.0470681960614343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0204153281004931,0,0.198582584603541,0,0,0,0,0,0,0,0,0,0.0190753472649188,0,0,0,0,0.0326919279347937,0,0.0156522902305435,0.135719170972313,0,0,0,0,0.02032355265126,0,0,0.0319781166213046,0.0195511658563466,0,0.0217063266948359,0.052956596168637,0,0.152320173412856,0,0,0.0329339538696473,0.468861740792361,0.268700254536461,0.309003808600736,0,0,0,0,0,0,0,0,0.0169745097646989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295097708601511,0.0932602961681968,0.158515636472714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.033967285130882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.026833566425996,0,0,0,0,0,0,0,0,0,0,0,0.0312779250205647,0,0,0.0217522219232226,0,0,0,0,0,0,0,0.0245426289303509,0,0,0,0,0,0,0,0,0,0,0,0.0230604544473183,0,0.133104146281952,0.106563752628775,0,0,0,0.0160451566633019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0221049291708803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0239681640494532,0,0,0,0,0,0.038477471376504,0,0,0,0,0,0,0,0,0.0370293221228937,0,0,0,0,0,0,0.125079054408396,0.799195440234514,0.970091454473967,0.629726061975799,0,0,0,0,0,0,0,0,0,0,0.069957971098037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0599993818810313,0.083434692829602,0.0238412128518329,0,0,0,0.0139246949329419,0.0298059097072022,0.0139062504973587,0.0371293640201177,0.0132981630510481,0.0160017698361234,0,0,0,0,0,0.0461393176027847,0.0243468014251482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0275488346793605,0,0,0,0.040292085331151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0281767281764315,0.065655825495796,0,0 | |||
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0.664214338129335,0.381636141962868,0.231008947931991,0.127893569522672,0.0642873521037868,0,0.0699790221274244,0,0,0,0,0.0558041721483835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673620022139481,0.876694568058672,0.428210788219066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198582584603541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264512262907024,0.204093579732844,0.140259928189304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231013950740173,0.0994554632344034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760376943436681,1.03328707850495,0.621030737309247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|gostat_on_MCL_coexpression= | |||
|ontology_enrichment_celltype=CL:0000791!1.37e-32!9;CL:0000789!1.37e-32!9;CL:0002420!1.37e-32!9;CL:0002419!1.37e-32!9;CL:0000790!1.37e-32!9;CL:0000988!2.13e-30!32;CL:0002032!2.13e-30!32;CL:0000037!2.13e-30!32;CL:0000566!2.13e-30!32;CL:0000837!2.13e-30!32;CL:0000838!2.19e-30!12;CL:0000624!4.47e-28!8;CL:0000542!5.80e-28!13;CL:0000051!5.80e-28!13;CL:0000084!1.65e-26!11;CL:0000827!1.65e-26!11;CL:0002320!1.68e-23!46;CL:0000134!1.68e-23!46;CL:0002242!1.65e-22!16;CL:0000738!4.06e-21!17;CL:0002087!4.06e-21!17;CL:0000219!1.12e-19!54;CL:0000893!5.84e-19!6;CL:0002489!5.84e-19!6;CL:0000898!5.84e-19!6;CL:0000809!5.84e-19!6;CL:0000810!5.84e-19!6;CL:0000895!5.84e-19!6;CL:0000808!5.84e-19!6;CL:0000894!5.84e-19!6;CL:0000806!5.84e-19!6;CL:0000807!5.84e-19!6;CL:0000805!5.84e-19!6;CL:0002425!5.84e-19!6;CL:0002436!5.84e-19!6;CL:0002427!5.84e-19!6;CL:0002428!5.84e-19!6;CL:0002429!5.84e-19!6;CL:0002433!5.84e-19!6;CL:0002431!5.84e-19!6;CL:0002432!5.84e-19!6;CL:0002031!3.71e-17!25;CL:0000034!4.97e-15!97;CL:0000723!1.09e-10!91;CL:0000048!1.09e-10!91;CL:0000049!2.68e-08!19;CL:0000548!6.24e-08!115;CL:0000255!6.24e-08!115;CL:0002371!1.15e-07!118 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.68e-23!46 | |||
|tfbs_overrepresentation_for_novel_motifs=0.752782,0.564138,0.722405,1.87917,0.587814,0.81763,0.919454,0.467321,1.20566,0.235304,0.870507,0.906098,0.467629,0.933025,0.608226,0,1.14208,0.578045,0.448066,0.876292,0.679146,0.275782,0.932027,0.585919,0.731217,0.963352,0.437236,0.841386,0.64294,0.380786,0.825437,1.24901,0.575271,0.411696,0.608816,0.444545,0.563758,0.902078,0.536514,0.50014,0.582863,0.831295,0.724277,0.610669,0.156582,0.788421,1.05665,0.859154,0.663409,0.646474,1.12346,0.99279,0.971403,1.3966,1.41464,0.940919,0.657156,0.891887,0.425455,0.938668,1.22795,1.00308,0.494668,1.11142,0.953187,1.15459,1.55483,1.90983,1.22303,1.7608,0.700291,0.474956,0.284975,1.44925,0.416814,0.402065,0.411601,1.04436,1.20986,1.63704,0.476502,1.16055,1.00151,0.459035,1.32978,0.181575,0.195254,0.380977,1.06194,2.07346,1.62608,1.33496,2.81786,0.595071,0.531443,0.509215,1.17262,1.26539,1.05692,2.50519,0.563856,1.24872,1.37854,1.12409,1.12297,0.830796,1.18646,0.854628,0.689894,0.681267,0.744607,1.38039,0.685481,0.876299,1.63327,0.580657,0.212464,0.805461,1.14346,0.559153,1.45481,1.08896,0.965352,1.04338,1.68841,1.21376,0.928483,1.25534,1.55328,0.598722,1.36093,0.792832,1.52297,0.955954,1.65529,0.751419,0.762499,0.832891,1.60513,2.44352,2.04137,1.55966,0.978551,1.26,1.11604,0.831808,1.06002,2.40374,0.765221,0.589976,0.38417,0.260379,1.39822,0.516739,0.954936,1.48249,0.993889,0.622823,0.749933,0.762177,1.61484,1.32889,1.21423,0.741984,1.11251,0.94678,0.562367,0.904334,0.135528 | |||
|tfbs_overrepresentation_jaspar=MA0003.1;0.245953,MA0004.1;0.801718,MA0006.1;0.60285,MA0007.1;0.784593,MA0009.1;1.27673,MA0014.1;0.133574,MA0017.1;0.635031,MA0019.1;1.08369,MA0024.1;1.23079,MA0025.1;1.51835,MA0027.1;2.9431,MA0028.1;0.61552,MA0029.1;1.20789,MA0030.1;1.21482,MA0031.1;1.17722,MA0038.1;0.963265,MA0040.1;1.28983,MA0041.1;0.714279,MA0042.1;0.69885,MA0043.1;1.3775,MA0046.1;1.31428,MA0048.1;0.353763,MA0050.1;0.845669,MA0051.1;0.973068,MA0052.1;1.29825,MA0055.1;0.190475,MA0056.1;0,MA0057.1;0.337566,MA0058.1;0.690848,MA0059.1;0.705317,MA0060.1;0.502699,MA0061.1;0.5406,MA0063.1;0,MA0066.1;0.951196,MA0067.1;1.63197,MA0068.1;0.343188,MA0069.1;1.29861,MA0070.1;1.28847,MA0071.1;0.844726,MA0072.1;1.2796,MA0073.1;0.00834468,MA0074.1;0.911576,MA0076.1;0.657929,MA0077.1;1.2569,MA0078.1;1.0091,MA0081.1;0.732313,MA0083.1;1.37668,MA0084.1;1.96428,MA0087.1;1.33189,MA0088.1;0.27999,MA0089.1;0,MA0090.1;0.762482,MA0091.1;0.816659,MA0092.1;0.762845,MA0093.1;0.62555,MA0095.1;0,MA0098.1;0,MA0100.1;0.89873,MA0101.1;1.70277,MA0103.1;0.647985,MA0105.1;1.04599,MA0106.1;1.01755,MA0107.1;0.640607,MA0108.2;1.10817,MA0109.1;0,MA0111.1;0.778753,MA0113.1;0.986839,MA0114.1;0.537669,MA0115.1;1.38041,MA0116.1;0.602598,MA0117.1;1.34691,MA0119.1;0.716476,MA0122.1;1.36752,MA0124.1;1.57762,MA0125.1;1.5017,MA0130.1;0,MA0131.1;1.07881,MA0132.1;0,MA0133.1;0,MA0135.1;1.4152,MA0136.1;0.933582,MA0139.1;0.462282,MA0140.1;0.898603,MA0141.1;0.671467,MA0142.1;1.16183,MA0143.1;1.00467,MA0144.1;1.33779,MA0145.1;0.292366,MA0146.1;0.151124,MA0147.1;0.556853,MA0148.1;0.820161,MA0149.1;0.722227,MA0062.2;0.412742,MA0035.2;0.903829,MA0039.2;0.0481552,MA0138.2;1.07027,MA0002.2;1.17677,MA0137.2;0.668025,MA0104.2;0.48458,MA0047.2;0.962424,MA0112.2;0.29236,MA0065.2;0.292912,MA0150.1;0.784464,MA0151.1;0,MA0152.1;0.962542,MA0153.1;1.43238,MA0154.1;0.35067,MA0155.1;0.312898,MA0156.1;1.58027,MA0157.1;1.12772,MA0158.1;0,MA0159.1;0.569393,MA0160.1;0.823568,MA0161.1;0,MA0162.1;0.166722,MA0163.1;0.157796,MA0164.1;0.933981,MA0080.2;0.64167,MA0018.2;0.944669,MA0099.2;1.06348,MA0079.2;0.00937321,MA0102.2;2.01714,MA0258.1;0.520639,MA0259.1;0.543506,MA0442.1;0 | |||
}} |
Latest revision as of 19:24, 17 September 2013
Phase1 CAGE Peaks
Short description | |
---|---|
Mm9::chr15:57996381..57996420,- | p@chr15:57996381..57996420 - |
Mm9::chr1:132916420..132916429,+ | p1@Il10 |
Mm9::chr9:66730263..66730273,- | p@chr9:66730263..66730273 - |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
no results for this coexpression
Relative expression of the co-expression cluster over median <br>Analyst:
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.68e-23 | 46 |
TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.245953 |
MA0004.1 | 0.801718 |
MA0006.1 | 0.60285 |
MA0007.1 | 0.784593 |
MA0009.1 | 1.27673 |
MA0014.1 | 0.133574 |
MA0017.1 | 0.635031 |
MA0019.1 | 1.08369 |
MA0024.1 | 1.23079 |
MA0025.1 | 1.51835 |
MA0027.1 | 2.9431 |
MA0028.1 | 0.61552 |
MA0029.1 | 1.20789 |
MA0030.1 | 1.21482 |
MA0031.1 | 1.17722 |
MA0038.1 | 0.963265 |
MA0040.1 | 1.28983 |
MA0041.1 | 0.714279 |
MA0042.1 | 0.69885 |
MA0043.1 | 1.3775 |
MA0046.1 | 1.31428 |
MA0048.1 | 0.353763 |
MA0050.1 | 0.845669 |
MA0051.1 | 0.973068 |
MA0052.1 | 1.29825 |
MA0055.1 | 0.190475 |
MA0056.1 | 0 |
MA0057.1 | 0.337566 |
MA0058.1 | 0.690848 |
MA0059.1 | 0.705317 |
MA0060.1 | 0.502699 |
MA0061.1 | 0.5406 |
MA0063.1 | 0 |
MA0066.1 | 0.951196 |
MA0067.1 | 1.63197 |
MA0068.1 | 0.343188 |
MA0069.1 | 1.29861 |
MA0070.1 | 1.28847 |
MA0071.1 | 0.844726 |
MA0072.1 | 1.2796 |
MA0073.1 | 0.00834468 |
MA0074.1 | 0.911576 |
MA0076.1 | 0.657929 |
MA0077.1 | 1.2569 |
MA0078.1 | 1.0091 |
MA0081.1 | 0.732313 |
MA0083.1 | 1.37668 |
MA0084.1 | 1.96428 |
MA0087.1 | 1.33189 |
MA0088.1 | 0.27999 |
MA0089.1 | 0 |
MA0090.1 | 0.762482 |
MA0091.1 | 0.816659 |
MA0092.1 | 0.762845 |
MA0093.1 | 0.62555 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.89873 |
MA0101.1 | 1.70277 |
MA0103.1 | 0.647985 |
MA0105.1 | 1.04599 |
MA0106.1 | 1.01755 |
MA0107.1 | 0.640607 |
MA0108.2 | 1.10817 |
MA0109.1 | 0 |
MA0111.1 | 0.778753 |
MA0113.1 | 0.986839 |
MA0114.1 | 0.537669 |
MA0115.1 | 1.38041 |
MA0116.1 | 0.602598 |
MA0117.1 | 1.34691 |
MA0119.1 | 0.716476 |
MA0122.1 | 1.36752 |
MA0124.1 | 1.57762 |
MA0125.1 | 1.5017 |
MA0130.1 | 0 |
MA0131.1 | 1.07881 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.4152 |
MA0136.1 | 0.933582 |
MA0139.1 | 0.462282 |
MA0140.1 | 0.898603 |
MA0141.1 | 0.671467 |
MA0142.1 | 1.16183 |
MA0143.1 | 1.00467 |
MA0144.1 | 1.33779 |
MA0145.1 | 0.292366 |
MA0146.1 | 0.151124 |
MA0147.1 | 0.556853 |
MA0148.1 | 0.820161 |
MA0149.1 | 0.722227 |
MA0062.2 | 0.412742 |
MA0035.2 | 0.903829 |
MA0039.2 | 0.0481552 |
MA0138.2 | 1.07027 |
MA0002.2 | 1.17677 |
MA0137.2 | 0.668025 |
MA0104.2 | 0.48458 |
MA0047.2 | 0.962424 |
MA0112.2 | 0.29236 |
MA0065.2 | 0.292912 |
MA0150.1 | 0.784464 |
MA0151.1 | 0 |
MA0152.1 | 0.962542 |
MA0153.1 | 1.43238 |
MA0154.1 | 0.35067 |
MA0155.1 | 0.312898 |
MA0156.1 | 1.58027 |
MA0157.1 | 1.12772 |
MA0158.1 | 0 |
MA0159.1 | 0.569393 |
MA0160.1 | 0.823568 |
MA0161.1 | 0 |
MA0162.1 | 0.166722 |
MA0163.1 | 0.157796 |
MA0164.1 | 0.933981 |
MA0080.2 | 0.64167 |
MA0018.2 | 0.944669 |
MA0099.2 | 1.06348 |
MA0079.2 | 0.00937321 |
MA0102.2 | 2.01714 |
MA0258.1 | 0.520639 |
MA0259.1 | 0.543506 |
MA0442.1 | 0 |