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Coexpression cluster:C36: Difference between revisions

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|tfbs_overrepresentation_for_novel_motifs=1.74438e-06,1.07421e-12,3.3255e-07,0.265279,2.13805,1.21672,0.000368509,0.583374,0.0211204,4.98973e-10,6.43266e-07,0.67321,2.3682e-05,0.000237407,4.89615,0.773592,0.00318776,4.872,6.44069e-05,0.00182396,3.60046,0.00341501,2.674e-05,3.22655,0.0489986,0.01357,0.0688065,0.00372769,1.14053e-05,0.00245475,0.000306105,1.03445,0.00762595,0.0823934,3.85977e-07,1.40438e-09,0,0.000678236,0.711608,7.38917e-08,3.24952,7.75496e-06,1.09534,1.48363,4.8098e-06,0.00879038,2.44727e-06,4.28795e-06,1.75392,0.0179933,0.009714,0.00145116,0.0294465,0.00871723,0.359257,0.00692311,2.34275,5.9785e-06,0.128166,2.055e-05,0.0313577,4.89102e-07,0.10978,0.000103049,0.000789313,0.262319,0.604164,0.777756,1.65377,0.0876207,1.8846e-08,2.69355,0,2.25961,0,9.24379e-05,0.640753,0.018495,0.942948,3.52953,1.24749,0.0465089,2.74401,2.7231,0.0338318,0,4.34257e-05,0.0468936,0.00870366,0.298384,0.00752881,0.0244139,1.64426,2.93547,7.89557e-08,0.3707,0.0483713,0.0404568,0.0192629,0.000602896,1.31746,0.130893,0.0375237,0.81926,0.0212572,4.90792e-10,0.00015752,0.508681,0.000289872,3.89757e-12,0.0597199,0.0711054,0.31178,0.000590064,0.754495,3.12245,0,0.00240662,0.0461177,0.320382,1.50032,0.827972,0.66379,0.597701,0.333327,0.0187597,0.947833,0.023604,0.441249,0.202487,0.627229,0.00873037,1.90027,1.31871,0.686581,0.82553,0.58679,0.218791,0.0308395,0.352259,0.110385,0.465106,0.823137,0.31176,0.000142245,0.312989,1.253,0.242311,0.396637,3.64506e-11,9.75426e-10,0,1.06954,6.26059e-07,0.420701,0.774967,1.42006,0.27003,0.0676662,1.27369e-06,0.0216468,0.55722,0.753297,0.0584148,1.14456,0.255941,0.0172549,1.323,0
|tfbs_overrepresentation_for_novel_motifs=1.74438e-06,1.07421e-12,3.3255e-07,0.265279,2.13805,1.21672,0.000368509,0.583374,0.0211204,4.98973e-10,6.43266e-07,0.67321,2.3682e-05,0.000237407,4.89615,0.773592,0.00318776,4.872,6.44069e-05,0.00182396,3.60046,0.00341501,2.674e-05,3.22655,0.0489986,0.01357,0.0688065,0.00372769,1.14053e-05,0.00245475,0.000306105,1.03445,0.00762595,0.0823934,3.85977e-07,1.40438e-09,0,0.000678236,0.711608,7.38917e-08,3.24952,7.75496e-06,1.09534,1.48363,4.8098e-06,0.00879038,2.44727e-06,4.28795e-06,1.75392,0.0179933,0.009714,0.00145116,0.0294465,0.00871723,0.359257,0.00692311,2.34275,5.9785e-06,0.128166,2.055e-05,0.0313577,4.89102e-07,0.10978,0.000103049,0.000789313,0.262319,0.604164,0.777756,1.65377,0.0876207,1.8846e-08,2.69355,0,2.25961,0,9.24379e-05,0.640753,0.018495,0.942948,3.52953,1.24749,0.0465089,2.74401,2.7231,0.0338318,0,4.34257e-05,0.0468936,0.00870366,0.298384,0.00752881,0.0244139,1.64426,2.93547,7.89557e-08,0.3707,0.0483713,0.0404568,0.0192629,0.000602896,1.31746,0.130893,0.0375237,0.81926,0.0212572,4.90792e-10,0.00015752,0.508681,0.000289872,3.89757e-12,0.0597199,0.0711054,0.31178,0.000590064,0.754495,3.12245,0,0.00240662,0.0461177,0.320382,1.50032,0.827972,0.66379,0.597701,0.333327,0.0187597,0.947833,0.023604,0.441249,0.202487,0.627229,0.00873037,1.90027,1.31871,0.686581,0.82553,0.58679,0.218791,0.0308395,0.352259,0.110385,0.465106,0.823137,0.31176,0.000142245,0.312989,1.253,0.242311,0.396637,3.64506e-11,9.75426e-10,0,1.06954,6.26059e-07,0.420701,0.774967,1.42006,0.27003,0.0676662,1.27369e-06,0.0216468,0.55722,0.753297,0.0584148,1.14456,0.255941,0.0172549,1.323,0
|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;0.487344,MA0006.1;5.00309e-07,MA0007.1;0.00188138,MA0009.1;0.643044,MA0014.1;0,MA0017.1;0.0874637,MA0019.1;0.111455,MA0024.1;0.00226518,MA0025.1;0.0678308,MA0027.1;0.756385,MA0028.1;5.14544e-06,MA0029.1;1.69297,MA0030.1;0.20248,MA0031.1;0.217575,MA0038.1;0.333409,MA0040.1;0.809718,MA0041.1;1.99444,MA0042.1;0.394534,MA0043.1;0.0354796,MA0046.1;7.93416,MA0048.1;1.42404e-08,MA0050.1;2.59708,MA0051.1;2.11578,MA0052.1;2.38842,MA0055.1;1.73171e-10,MA0056.1;0,MA0057.1;7.25607e-09,MA0058.1;0.0817349,MA0059.1;0.10352,MA0060.1;1.33194e-05,MA0061.1;13.7243,MA0063.1;0,MA0066.1;0.335401,MA0067.1;0.0450711,MA0068.1;3.8661e-05,MA0069.1;0.581087,MA0070.1;0.266868,MA0071.1;3.39415,MA0072.1;2.57665,MA0073.1;0,MA0074.1;0.00200854,MA0076.1;0.00730671,MA0077.1;0.4894,MA0078.1;0.949018,MA0081.1;0.314778,MA0083.1;0.015682,MA0084.1;0.338376,MA0087.1;0.509308,MA0088.1;8.56967e-10,MA0089.1;0,MA0090.1;0.405477,MA0091.1;0.506782,MA0092.1;0.564914,MA0093.1;0.59987,MA0095.1;0,MA0098.1;0,MA0100.1;0.000674552,MA0101.1;10.7528,MA0103.1;1.56549,MA0105.1;0.760742,MA0106.1;0.450142,MA0107.1;17.2562,MA0108.2;0.52969,MA0109.1;0,MA0111.1;0.191575,MA0113.1;0.804384,MA0114.1;0.0112878,MA0115.1;0.481917,MA0116.1;0.000252736,MA0117.1;0.00175605,MA0119.1;0.00150891,MA0122.1;0.365232,MA0124.1;0.381363,MA0125.1;3.48278,MA0130.1;0,MA0131.1;0.000212163,MA0132.1;0,MA0133.1;0,MA0135.1;1.53923,MA0136.1;1.46032,MA0139.1;1.08234e-08,MA0140.1;0.550493,MA0141.1;1.98043,MA0142.1;2.14465,MA0143.1;1.49933,MA0144.1;0.00202194,MA0145.1;6.29013e-07,MA0146.1;0,MA0147.1;5.76552e-05,MA0148.1;1.3778,MA0149.1;9.54273e-07,MA0062.2;3.36361e-07,MA0035.2;0.545465,MA0039.2;0,MA0138.2;0.00129351,MA0002.2;2.58887,MA0137.2;0.00839979,MA0104.2;3.33061e-08,MA0047.2;0.860405,MA0112.2;1.15255e-09,MA0065.2;2.78129e-07,MA0150.1;0.793839,MA0151.1;0,MA0152.1;0.839524,MA0153.1;2.46333,MA0154.1;1.43863,MA0155.1;2.7615e-07,MA0156.1;1.35847,MA0157.1;0.300458,MA0158.1;0,MA0159.1;0.0675526,MA0160.1;2.18476,MA0161.1;0,MA0162.1;0,MA0163.1;0,MA0164.1;1.06879,MA0080.2;2.68748,MA0018.2;0.00173601,MA0099.2;1.29173,MA0079.2;0,MA0102.2;0.0458751,MA0258.1;0.0099263,MA0259.1;0.00106931,MA0442.1;0
}}
}}

Revision as of 18:06, 22 January 2013


Full id: C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt



Phase1 CAGE Peaks

Hg19::chr10:13749752..13749761,-p21@FRMD4A
Hg19::chr10:13749771..13749780,-p20@FRMD4A
Hg19::chr10:13782297..13782308,-p@chr10:13782297..13782308
-
Hg19::chr10:13782546..13782590,-p@chr10:13782546..13782590
-
Hg19::chr10:13783921..13783942,-p@chr10:13783921..13783942
-
Hg19::chr10:13784223..13784234,-p@chr10:13784223..13784234
-
Hg19::chr10:13803760..13803769,-p@chr10:13803760..13803769
-
Hg19::chr10:13807866..13807874,-p@chr10:13807866..13807874
-
Hg19::chr10:13807899..13807909,-p@chr10:13807899..13807909
-
Hg19::chr10:34033100..34033104,-p@chr10:34033100..34033104
-
Hg19::chr10:49491044..49491055,-p@chr10:49491044..49491055
-
Hg19::chr10:67651195..67651279,-p@chr10:67651195..67651279
-
Hg19::chr10:85931560..85931577,-p2@ENST00000514797
p2@uc001kct.2
Hg19::chr10:88152551..88152565,-p@chr10:88152551..88152565
-
Hg19::chr10:92754303..92754313,+p2@ENST00000412362
Hg19::chr10:92754351..92754372,+p1@ENST00000412362
Hg19::chr10:97550975..97551013,+p@chr10:97550975..97551013
+
Hg19::chr10:98460644..98460661,-p5@PIK3AP1
Hg19::chr10:98460669..98460678,-p9@PIK3AP1
Hg19::chr10:98666877..98666913,+p16@LCOR
Hg19::chr11:102431581..102431588,-p@chr11:102431581..102431588
-
Hg19::chr11:115797122..115797132,+p@chr11:115797122..115797132
+
Hg19::chr11:115798018..115798032,+p@chr11:115798018..115798032
+
Hg19::chr11:120116459..120116470,+p@chr11:120116459..120116470
+
Hg19::chr11:120450692..120450712,+p@chr11:120450692..120450712
+
Hg19::chr11:124942192..124942204,-p@chr11:124942192..124942204
-
Hg19::chr11:128283298..128283317,+p@chr11:128283298..128283317
+
Hg19::chr11:22689648..22689665,+p11@GAS2
Hg19::chr11:22689684..22689716,+p7@GAS2
Hg19::chr11:22690235..22690250,+p@chr11:22690235..22690250
+
Hg19::chr11:22690252..22690257,+p@chr11:22690252..22690257
+
Hg19::chr11:22694146..22694154,+p29@GAS2
Hg19::chr11:22694156..22694167,+p24@GAS2
Hg19::chr11:22694172..22694176,+p35@GAS2
Hg19::chr11:22696209..22696229,-p@chr11:22696209..22696229
-
Hg19::chr11:22696593..22696604,+p@chr11:22696593..22696604
+
Hg19::chr11:22796452..22796457,+p@chr11:22796452..22796457
+
Hg19::chr11:22796483..22796490,+p@chr11:22796483..22796490
+
Hg19::chr11:22796499..22796509,+p@chr11:22796499..22796509
+
Hg19::chr11:22796538..22796542,+p@chr11:22796538..22796542
+
Hg19::chr11:61523971..61523988,-p@chr11:61523971..61523988
-
Hg19::chr11:65905088..65905098,-p@chr11:65905088..65905098
-
Hg19::chr11:67253567..67253602,+p@chr11:67253567..67253602
+
Hg19::chr11:88092835..88092844,-p@chr11:88092835..88092844
-
Hg19::chr11:88092856..88092865,-p@chr11:88092856..88092865
-
Hg19::chr11:94315309..94315315,+p@chr11:94315309..94315315
+
Hg19::chr12:102323662..102323677,+p@chr12:102323662..102323677
+
Hg19::chr12:11708761..11708781,-p2@ENST00000536492
Hg19::chr12:11708881..11708905,+p1@ENST00000545239
Hg19::chr12:11718253..11718257,-p@chr12:11718253..11718257
-
Hg19::chr12:11718369..11718380,-p@chr12:11718369..11718380
-
Hg19::chr12:31902400..31902413,+p@chr12:31902400..31902413
+
Hg19::chr12:32405506..32405536,-p@chr12:32405506..32405536
-
Hg19::chr12:41706432..41706438,-p@chr12:41706432..41706438
-
Hg19::chr12:4227335..4227346,-p2@ENST00000393388
Hg19::chr12:4227366..4227376,-p3@ENST00000393388
Hg19::chr12:4227379..4227389,-p4@ENST00000393388
Hg19::chr12:53594231..53594242,-p6@ITGB7
Hg19::chr12:54145563..54145598,+p@chr12:54145563..54145598
+
Hg19::chr12:54148108..54148118,+p@chr12:54148108..54148118
+
Hg19::chr12:54447026..54447038,+p@chr12:54447026..54447038
+
Hg19::chr12:92940988..92940994,+p@chr12:92940988..92940994
+
Hg19::chr12:92947468..92947482,+p@chr12:92947468..92947482
+
Hg19::chr12:92951200..92951216,+p@chr12:92951200..92951216
+
Hg19::chr12:92954981..92954999,+p@chr12:92954981..92954999
+
Hg19::chr12:92955027..92955030,+p@chr12:92955027..92955030
+
Hg19::chr13:29004140..29004147,-p@chr13:29004140..29004147
-
Hg19::chr13:29004151..29004169,-p@chr13:29004151..29004169
-
Hg19::chr13:29004291..29004302,-p@chr13:29004291..29004302
-
Hg19::chr13:46275247..46275259,-p@chr13:46275247..46275259
-
Hg19::chr13:46275262..46275308,-p@chr13:46275262..46275308
-
Hg19::chr13:46275743..46275749,-p@chr13:46275743..46275749
-
Hg19::chr13:46275780..46275790,-p@chr13:46275780..46275790
-
Hg19::chr13:46275819..46275834,-p@chr13:46275819..46275834
-
Hg19::chr13:75871095..75871098,-p@chr13:75871095..75871098
-
Hg19::chr13:78004818..78004832,+p@chr13:78004818..78004832
+
Hg19::chr13:78004839..78004857,+p@chr13:78004839..78004857
+
Hg19::chr13:78004865..78004885,+p@chr13:78004865..78004885
+
Hg19::chr13:88211990..88212001,-p@chr13:88211990..88212001
-
Hg19::chr14:106552655..106552665,-p1@Z14176
Hg19::chr14:106552755..106552765,-p1@IGHV3-9
Hg19::chr14:106552901..106552907,+p@chr14:106552901..106552907
+
Hg19::chr14:106725293..106725299,-p1@AF460806
p1@DQ523922
Hg19::chr14:106725402..106725428,-p1@AF103210
p1@AJ008183
p1@AJ008196
p1@AJ008214
p1@AJ008241
p1@AY003715
p1@AY003717
p1@AY003728
p1@AY003737
p1@AY003738
p1@AY003766
p1@AY003774
p1@AY003778
p1@AY003806
p1@AY003815
p1@AY003820
p1@AY003827
p1@AY003843
p1@AY003847
p1@AY003852
p1@AY003856
p1@AY003870
p1@DQ454401
p1@DQ454518
p1@DQ454562
p1@DQ454687
p1@DQ454747
p1@DQ454753
p1@DQ454767
p1@DQ454876
p1@DQ523884
p1@EU433871
p1@EU433883
p1@FJ839967
p1@FJ839989
p1@FJ840090
p1@FJ840175
p1@FJ840178
p1@FJ840195
p1@FJ840222
p1@FJ840312
p1@FJ840319
p1@FJ840320
p1@FJ840327
p1@FJ840338
p1@FJ840380
p1@FJ840391
p1@FJ873815
p1@FJ873824
p1@FJ873849
p1@FJ873867
p1@FJ873872
p1@FJ873885
p1@FJ873902
p1@FJ873910
p1@FJ873913
p1@FJ873916
p1@FJ873922
p1@FJ873935
p1@FJ873946
p1@FJ873974
p1@FJ873975
p1@FJ874010
p1@FJ874023
p1@FJ874034
p1@FJ874046
p1@FJ874048
p1@FJ874074
p1@FJ874087
p1@GQ232777
p1@GQ232859
p1@GQ232872
p1@GQ232877
p1@GQ232908
p1@GQ232923
p1@GQ232928
p1@GQ504854
p1@GU552704
p1@GU552708
p1@GU552710
p1@GU552718
p1@GU552741
p1@GU552742
p1@GU552746
p1@GU552748
p1@GU552758
p1@GU552759
p1@HM116131
p1@HM116209
p1@HM116214
p1@HM996533
p1@Z11945
Hg19::chr14:106725670..106725702,-p2@IGHV3-23
Hg19::chr14:107013249..107013255,-p1@AJ519224
p1@AJ519230
p1@AJ519232
p1@AJ519233
p1@AJ519246
p1@AJ519249
p1@AJ519251
p1@AJ519253
p1@AJ519255
p1@HM995877
Hg19::chr14:21121671..21121674,-p@chr14:21121671..21121674
-
Hg19::chr14:22852283..22852296,-p@chr14:22852283..22852296
-
Hg19::chr14:22947861..22947874,+p1@uc001wee.3
Hg19::chr14:22949214..22949247,+p@chr14:22949214..22949247
+
Hg19::chr14:22953057..22953099,-p@chr14:22953057..22953099
-
Hg19::chr14:22953192..22953201,-p@chr14:22953192..22953201
-
Hg19::chr14:22953249..22953258,-p@chr14:22953249..22953258
-
Hg19::chr14:22953283..22953295,-p@chr14:22953283..22953295
-
Hg19::chr14:22953396..22953406,-p@chr14:22953396..22953406
-
Hg19::chr14:22953440..22953456,-p@chr14:22953440..22953456
-
Hg19::chr14:22957933..22957943,+p3@uc001wek.2
Hg19::chr14:22958083..22958101,+p6@uc001wek.2
Hg19::chr14:22958177..22958187,+p5@uc001wek.2
Hg19::chr14:22958190..22958201,+p4@uc001wek.2
Hg19::chr14:22959635..22959647,-p@chr14:22959635..22959647
-
Hg19::chr14:22975105..22975122,+p2@uc001wfa.2
Hg19::chr14:22975382..22975400,+p1@uc001wfa.2
Hg19::chr14:22976569..22976589,+p1@uc001wfb.1
Hg19::chr14:22976633..22976649,+p1@TRAJ34
Hg19::chr14:23000807..23000874,+p1@TRAJ12
Hg19::chr14:23000898..23000909,+p2@uc001wgb.2
Hg19::chr14:23000927..23000938,+p1@uc001wgb.2
Hg19::chr14:23002375..23002384,+p@chr14:23002375..23002384
+
Hg19::chr14:23002427..23002444,+p1@TRAJ10
Hg19::chr14:23003305..23003325,+p@chr14:23003305..23003325
+
Hg19::chr14:23033176..23033184,+p@chr14:23033176..23033184
+
Hg19::chr14:34034235..34034251,+p@chr14:34034235..34034251
+
Hg19::chr14:34487836..34487866,-p2@EGLN3
Hg19::chr14:60679634..60679645,+p@chr14:60679634..60679645
+
Hg19::chr14:60679680..60679695,+p@chr14:60679680..60679695
+
Hg19::chr14:60679793..60679802,+p@chr14:60679793..60679802
+
Hg19::chr14:60679954..60679974,+p@chr14:60679954..60679974
+
Hg19::chr14:65768965..65768980,+p@chr14:65768965..65768980
+
Hg19::chr14:68746676..68746703,-p@chr14:68746676..68746703
-
Hg19::chr14:68749669..68749675,-p@chr14:68749669..68749675
-
Hg19::chr14:68751952..68751957,+p@chr14:68751952..68751957
+
Hg19::chr14:68773358..68773367,+p@chr14:68773358..68773367
+
Hg19::chr14:68850658..68850676,-p@chr14:68850658..68850676
-
Hg19::chr14:68868650..68868657,-p@chr14:68868650..68868657
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Hg19::chr14:68868795..68868802,+p@chr14:68868795..68868802
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Hg19::chr14:73182036..73182046,-p@chr14:73182036..73182046
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Hg19::chr14:74254460..74254476,-p33@C14orf43
Hg19::chr15:38852849..38852856,-p13@RASGRP1
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Hg19::chr15:47163783..47163787,-p@chr15:47163783..47163787
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Hg19::chr15:52671714..52671727,-p@chr15:52671714..52671727
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Hg19::chr15:52675376..52675397,-p1@Z22957
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Hg19::chr15:54876150..54876191,+p@chr15:54876150..54876191
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Hg19::chr15:90546643..90546659,+p@chr15:90546643..90546659
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Hg19::chr16:57391831..57391846,+p@chr16:57391831..57391846
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Hg19::chr17:16842731..16842777,+p@chr17:16842731..16842777
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Hg19::chr17:25833874..25833886,+p@chr17:25833874..25833886
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Hg19::chr17:38468836..38468865,+p@chr17:38468836..38468865
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Hg19::chr17:48270478..48270487,-p3@X98708
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Hg19::chr17:75184440..75184449,+p@chr17:75184440..75184449
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Hg19::chr18:69969309..69969317,-p@chr18:69969309..69969317
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Hg19::chr19:16698446..16698478,+p2@AK094597
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Hg19::chr19:35948297..35948309,+p@chr19:35948297..35948309
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Hg19::chr19:7765022..7765029,-p14@FCER2
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Hg19::chr1:101874029..101874040,+p@chr1:101874029..101874040
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Hg19::chr1:111762715..111762732,+p@chr1:111762715..111762732
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Hg19::chr1:157353068..157353075,+p@chr1:157353068..157353075
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Hg19::chr1:168513229..168513244,-p1@XCL2
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Hg19::chr1:207098131..207098164,-p@chr1:207098131..207098164
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Hg19::chr1:210574182..210574196,+p@chr1:210574182..210574196
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Hg19::chr1:238225731..238225741,+p@chr1:238225731..238225741
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Hg19::chr1:28503735..28503746,-p10@PTAFR
Hg19::chr1:28503756..28503768,-p5@PTAFR
Hg19::chr1:28503788..28503795,-p14@PTAFR
Hg19::chr1:28503800..28503813,-p7@PTAFR
Hg19::chr1:28503825..28503832,-p12@PTAFR
Hg19::chr1:28503842..28503847,-p11@PTAFR
Hg19::chr1:28503866..28503873,-p20@PTAFR
Hg19::chr1:31218977..31218987,-p10@LAPTM5
Hg19::chr1:31218995..31219006,-p8@LAPTM5
Hg19::chr1:31219008..31219015,-p15@LAPTM5
Hg19::chr1:42272535..42272539,-p@chr1:42272535..42272539
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Hg19::chr1:56599695..56599711,-p@chr1:56599695..56599711
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Hg19::chr1:56599715..56599745,-p@chr1:56599715..56599745
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Hg19::chr1:56797922..56797938,-p@chr1:56797922..56797938
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Hg19::chr1:6884908..6884918,+p9@CAMTA1
Hg19::chr1:6884943..6884957,+p7@CAMTA1
Hg19::chr1:82072981..82072994,+p@chr1:82072981..82072994
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Hg19::chr1:82745128..82745135,-p@chr1:82745128..82745135
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Hg19::chr20:45216879..45216896,-p9@SLC13A3
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Hg19::chr20:6817702..6817709,+p@chr20:6817702..6817709
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Hg19::chr20:6817741..6817746,+p@chr20:6817741..6817746
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Hg19::chr20:6819213..6819230,+p@chr20:6819213..6819230
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Hg19::chr20:6819236..6819281,+p@chr20:6819236..6819281
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Hg19::chr20:7129614..7129618,+p@chr20:7129614..7129618
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Hg19::chr21:26793751..26793780,-p@chr21:26793751..26793780
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Hg19::chr21:26793787..26793800,-p@chr21:26793787..26793800
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Hg19::chr21:26793849..26793876,-p@chr21:26793849..26793876
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Hg19::chr21:26793934..26793938,-p@chr21:26793934..26793938
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Hg19::chr21:26794174..26794183,-p@chr21:26794174..26794183
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Hg19::chr21:26796969..26796990,-p4@LINC00158
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Hg19::chr21:26797019..26797053,-p2@LINC00158
Hg19::chr21:26797071..26797086,-p3@LINC00158
Hg19::chr21:26797102..26797131,-p1@LINC00158
Hg19::chr21:26835146..26835160,+p@chr21:26835146..26835160
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Hg19::chr22:22550626..22550639,-p@chr22:22550626..22550639
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Hg19::chr22:23198604..23198613,-p@chr22:23198604..23198613
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Hg19::chr22:23199184..23199197,+p1@IGLV2-5
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Hg19::chr22:37259144..37259156,+p@chr22:37259144..37259156
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Hg19::chr22:44421841..44421865,+p13@PARVB
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Hg19::chr2:12008246..12008257,+p@chr2:12008246..12008257
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Hg19::chr2:12027761..12027766,+p@chr2:12027761..12027766
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Hg19::chr2:12149050..12149056,+p@chr2:12149050..12149056
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Hg19::chr2:123497813..123497829,+p@chr2:123497813..123497829
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Hg19::chr2:123497849..123497884,+p@chr2:123497849..123497884
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Hg19::chr2:123498365..123498369,+p@chr2:123498365..123498369
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Hg19::chr2:147567757..147567760,-p@chr2:147567757..147567760
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Hg19::chr2:166451610..166451619,+p@chr2:166451610..166451619
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Hg19::chr2:166451642..166451652,+p@chr2:166451642..166451652
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Hg19::chr2:199565289..199565292,+p@chr2:199565289..199565292
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Hg19::chr2:199565363..199565374,+p@chr2:199565363..199565374
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Hg19::chr2:211933382..211933392,+p@chr2:211933382..211933392
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Hg19::chr2:213887070..213887081,-p@chr2:213887070..213887081
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Hg19::chr2:233946973..233946983,-p@chr2:233946973..233946983
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Hg19::chr2:238661800..238661842,+p@chr2:238661800..238661842
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Hg19::chr2:76303907..76303923,+p@chr2:76303907..76303923
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Hg19::chr2:7862645..7862662,+p@chr2:7862645..7862662
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Hg19::chr2:80758472..80758482,+p@chr2:80758472..80758482
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Hg19::chr2:8628208..8628235,-p@chr2:8628208..8628235
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Hg19::chr2:8661151..8661163,-p@chr2:8661151..8661163
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Hg19::chr3:105974827..105974843,-p@chr3:105974827..105974843
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Hg19::chr3:105974987..105975005,+p@chr3:105974987..105975005
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Hg19::chr3:118529638..118529651,-p1@EU250752
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Hg19::chr3:121797458..121797472,-p@chr3:121797458..121797472
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Hg19::chr3:121797478..121797512,-p@chr3:121797478..121797512
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Hg19::chr3:131430102..131430108,+p@chr3:131430102..131430108
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Hg19::chr3:165547538..165547559,-p@chr3:165547538..165547559
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Hg19::chr4:96446031..96446044,-p@chr4:96446031..96446044
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Hg19::chr5:118676484..118676491,+p@chr5:118676484..118676491
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Hg19::chr5:142405065..142405071,+p@chr5:142405065..142405071
+
Hg19::chr5:142405106..142405133,+p@chr5:142405106..142405133
+
Hg19::chr5:142434468..142434479,+p@chr5:142434468..142434479
+
Hg19::chr5:142435323..142435334,+p27@ARHGAP26
Hg19::chr5:142436582..142436593,+p@chr5:142436582..142436593
+
Hg19::chr5:142436605..142436616,+p@chr5:142436605..142436616
+
Hg19::chr5:142437308..142437319,-p@chr5:142437308..142437319
-
Hg19::chr5:142437328..142437337,-p@chr5:142437328..142437337
-
Hg19::chr5:142586417..142586428,+p28@ARHGAP26
Hg19::chr5:142586430..142586437,+p35@ARHGAP26
Hg19::chr5:142586475..142586483,+p34@ARHGAP26
Hg19::chr5:142586484..142586492,+p32@ARHGAP26
Hg19::chr5:142586505..142586524,+p16@ARHGAP26
Hg19::chr5:142586545..142586557,+p19@ARHGAP26
Hg19::chr5:1493692..1493700,+p@chr5:1493692..1493700
+
Hg19::chr5:1493707..1493728,+p@chr5:1493707..1493728
+
Hg19::chr5:162307771..162307780,-p@chr5:162307771..162307780
-
Hg19::chr5:169173440..169173449,+p@chr5:169173440..169173449
+
Hg19::chr5:169173454..169173470,+p@chr5:169173454..169173470
+
Hg19::chr5:32573135..32573145,-p@chr5:32573135..32573145
-
Hg19::chr5:88120083..88120096,-p33@MEF2C
Hg19::chr6:107419942..107419964,-p@chr6:107419942..107419964
-
Hg19::chr6:12119385..12119418,-p@chr6:12119385..12119418
-
Hg19::chr6:13229960..13229972,+p@chr6:13229960..13229972
+
Hg19::chr6:15736213..15736230,+p@chr6:15736213..15736230
+
Hg19::chr6:16493493..16493512,-p@chr6:16493493..16493512
-
Hg19::chr6:16493517..16493528,-p@chr6:16493517..16493528
-
Hg19::chr6:16493530..16493550,-p@chr6:16493530..16493550
-
Hg19::chr6:16493553..16493560,-p@chr6:16493553..16493560
-
Hg19::chr6:29855335..29855373,+p2@HLA-H
Hg19::chr6:29855374..29855399,+p3@HLA-H
Hg19::chr6:30080894..30080903,-p2@TRIM31
Hg19::chr6:37523438..37523455,-p1@MIR4462
Hg19::chr6:37524781..37524818,+p@chr6:37524781..37524818
+
Hg19::chr6:40116735..40116760,-p@chr6:40116735..40116760
-
Hg19::chr6:40116772..40116777,-p@chr6:40116772..40116777
-
Hg19::chr6:43305990..43305999,-p14@ZNF318
Hg19::chr6:44228288..44228303,-p9@NFKBIE
Hg19::chr6:51799070..51799080,-p@chr6:51799070..51799080
-
Hg19::chr6:63803755..63803760,-p@chr6:63803755..63803760
-
Hg19::chr6:6587686..6587694,+p@chr6:6587686..6587694
+
Hg19::chr6:70576319..70576330,+p3@COL19A1
Hg19::chr6:78271742..78271753,-p@chr6:78271742..78271753
-
Hg19::chr6:92185913..92185929,+p@chr6:92185913..92185929
+
Hg19::chr6:9766925..9766938,-p@chr6:9766925..9766938
-
Hg19::chr7:120035869..120035940,+p@chr7:120035869..120035940
+
Hg19::chr7:120496807..120496827,-p5@TSPAN12
Hg19::chr7:122273766..122273779,+p@chr7:122273766..122273779
+
Hg19::chr7:126341186..126341197,-p@chr7:126341186..126341197
-
Hg19::chr7:126341887..126341910,-p@chr7:126341887..126341910
-
Hg19::chr7:134873473..134873488,-p1@AK124765
Hg19::chr7:134873528..134873537,-p2@AK124765
Hg19::chr7:14755204..14755216,+p@chr7:14755204..14755216
+
Hg19::chr7:20177772..20177776,-p@chr7:20177772..20177776
-
Hg19::chr7:2352299..2352311,-p@chr7:2352299..2352311
-
Hg19::chr7:27123360..27123381,-p@chr7:27123360..27123381
-
Hg19::chr7:28610060..28610073,+p9@CREB5
Hg19::chr7:28610099..28610113,+p5@CREB5
Hg19::chr7:34797697..34797703,-p6@AAA1
Hg19::chr7:55603250..55603270,+p@chr7:55603250..55603270
+
Hg19::chr7:8168438..8168460,-p@chr7:8168438..8168460
-
Hg19::chr7:82013680..82013689,+p@chr7:82013680..82013689
+
Hg19::chr7:87556026..87556035,-p@chr7:87556026..87556035
-
Hg19::chr7:87556041..87556052,-p@chr7:87556041..87556052
-
Hg19::chr7:99806838..99806856,+p@chr7:99806838..99806856
+
Hg19::chr8:101455542..101455552,+p@chr8:101455542..101455552
+
Hg19::chr8:101455560..101455578,+p@chr8:101455560..101455578
+
Hg19::chr8:101457536..101457539,-p@chr8:101457536..101457539
-
Hg19::chr8:101457676..101457689,+p@chr8:101457676..101457689
+
Hg19::chr8:101457739..101457753,+p@chr8:101457739..101457753
+
Hg19::chr8:101468742..101468747,+p@chr8:101468742..101468747
+
Hg19::chr8:103541709..103541730,-p@chr8:103541709..103541730
-
Hg19::chr8:114697666..114697676,+p@chr8:114697666..114697676
+
Hg19::chr8:128191119..128191126,+p@chr8:128191119..128191126
+
Hg19::chr8:128209516..128209522,+p@chr8:128209516..128209522
+
Hg19::chr8:128227493..128227505,+p@chr8:128227493..128227505
+
Hg19::chr8:128300656..128300665,+p@chr8:128300656..128300665
+
Hg19::chr8:128300672..128300685,+p@chr8:128300672..128300685
+
Hg19::chr8:128300703..128300716,+p@chr8:128300703..128300716
+
Hg19::chr8:128313154..128313161,-p@chr8:128313154..128313161
-
Hg19::chr8:128315046..128315054,-p@chr8:128315046..128315054
-
Hg19::chr8:128315099..128315104,-p@chr8:128315099..128315104
-
Hg19::chr8:128315123..128315130,-p@chr8:128315123..128315130
-
Hg19::chr8:22558680..22558703,+p@chr8:22558680..22558703
+
Hg19::chr8:22558721..22558731,+p@chr8:22558721..22558731
+
Hg19::chr8:22566166..22566175,+p@chr8:22566166..22566175
+
Hg19::chr8:22566299..22566345,+p@chr8:22566299..22566345
+
Hg19::chr8:22577000..22577024,+p@chr8:22577000..22577024
+
Hg19::chr8:28223745..28223754,+p@chr8:28223745..28223754
+
Hg19::chr8:65709751..65709781,-p@chr8:65709751..65709781
-
Hg19::chr8:76319850..76319870,+p4@HNF4G
Hg19::chr8:8475977..8475993,+p@chr8:8475977..8475993
+
Hg19::chr8:8476004..8476009,+p@chr8:8476004..8476009
+
Hg19::chr9:1050428..1050439,+p4@DMRT2
Hg19::chr9:1050449..1050468,+p2@DMRT2
Hg19::chr9:109075418..109075431,+p@chr9:109075418..109075431
+
Hg19::chr9:109075440..109075447,+p@chr9:109075440..109075447
+
Hg19::chr9:110047130..110047161,+p9@RAD23B
Hg19::chr9:128394741..128394751,-p@chr9:128394741..128394751
-
Hg19::chr9:16482802..16482807,-p@chr9:16482802..16482807
-
Hg19::chr9:16482829..16482841,-p@chr9:16482829..16482841
-
Hg19::chr9:16983832..16983838,+p@chr9:16983832..16983838
+
Hg19::chr9:17182940..17182977,+p@chr9:17182940..17182977
+
Hg19::chr9:17222537..17222541,+p@chr9:17222537..17222541
+
Hg19::chr9:37144880..37144885,-p@chr9:37144880..37144885
-
Hg19::chr9:37289502..37289510,+p@chr9:37289502..37289510
+
Hg19::chr9:5517014..5517052,+p@chr9:5517014..5517052
+
Hg19::chr9:87316877..87316888,+p@chr9:87316877..87316888
+
Hg19::chr9:87316933..87316943,+p@chr9:87316933..87316943
+
Hg19::chrX:11778090..11778099,+p26@MSL3
Hg19::chrX:11778155..11778177,+p7@MSL3
Hg19::chrX:11779376..11779389,+p@chrX:11779376..11779389
+
Hg19::chrX:11779410..11779419,+p@chrX:11779410..11779419
+
Hg19::chrX:11779605..11779628,+p@chrX:11779605..11779628
+
Hg19::chrX:11810992..11811001,+p@chrX:11810992..11811001
+
Hg19::chrX:13771036..13771045,+p@chrX:13771036..13771045
+
Hg19::chrX:13780045..13780050,+p@chrX:13780045..13780050
+
Hg19::chrX:142065575..142065592,-p@chrX:142065575..142065592
-
Hg19::chrX:15216934..15216939,-p@chrX:15216934..15216939
-
Hg19::chrX:15216941..15216950,-p@chrX:15216941..15216950
-
Hg19::chrX:15216963..15216979,-p@chrX:15216963..15216979
-
Hg19::chrX:19765218..19765230,-p@chrX:19765218..19765230
-
Hg19::chrX:19819132..19819162,-p@chrX:19819132..19819162
-
Hg19::chrX:19825576..19825589,-p@chrX:19825576..19825589
-
Hg19::chrX:19825665..19825680,-p@chrX:19825665..19825680
-
Hg19::chrX:19854446..19854468,-p20@SH3KBP1
Hg19::chrX:19854476..19854495,-p30@SH3KBP1
Hg19::chrX:19882103..19882144,+p@chrX:19882103..19882144
+
Hg19::chrX:20074867..20074877,-p11@MAP7D2
Hg19::chrX:20074909..20074954,-p4@MAP7D2
Hg19::chrX:20074979..20075010,-p3@MAP7D2
Hg19::chrX:22050419..22050450,+p1@PHEX
Hg19::chrX:22056165..22056173,+p7@PHEX
Hg19::chrX:22056257..22056302,+p2@PHEX
Hg19::chrX:29573687..29573696,-p@chrX:29573687..29573696
-
Hg19::chrX:31196087..31196099,-p@chrX:31196087..31196099
-
Hg19::chrX:31196266..31196295,-p@chrX:31196266..31196295
-
Hg19::chrX:46513420..46513425,-p@chrX:46513420..46513425
-
Hg19::chrX:6227280..6227284,+p@chrX:6227280..6227284
+
Hg19::chrX:9972103..9972124,+p@chrX:9972103..9972124
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0032502developmental process0.00219476440964271
GO:0005515protein binding0.00219476440964271
GO:0042330taxis0.00219476440964271
GO:0006935chemotaxis0.00219476440964271
GO:0007275multicellular organismal development0.00219476440964271
GO:0048513organ development0.00219476440964271
GO:0048856anatomical structure development0.00256244224350349
GO:0048731system development0.00256244224350349
GO:0007626locomotory behavior0.00256244224350349
GO:0008009chemokine activity0.00384522098278705
GO:0042379chemokine receptor binding0.00384522098278705
GO:0032501multicellular organismal process0.00505004133334144
GO:0030426growth cone0.00687927808508844
GO:0030427site of polarized growth0.00687927808508844
GO:0001664G-protein-coupled receptor binding0.00687927808508844
GO:0050794regulation of cellular process0.00852004298658917
GO:0007610behavior0.00876268216484562
GO:0007267cell-cell signaling0.0167305732280785
GO:0006366transcription from RNA polymerase II promoter0.0167305732280785
GO:0065007biological regulation0.0192382479609515
GO:0050789regulation of biological process0.0205303385264814
GO:0045610regulation of hemocyte differentiation0.0242188905245067
GO:0008349MAP kinase kinase kinase kinase activity0.0242188905245067
GO:0006357regulation of transcription from RNA polymerase II promoter0.0242188905245067
GO:0001501skeletal development0.0314270170411542
GO:0050793regulation of developmental process0.0360978928605626
GO:0016533cyclin-dependent protein kinase 5 activator complex0.0360978928605626
GO:0035235ionotropic glutamate receptor signaling pathway0.0360978928605626
GO:0016534cyclin-dependent protein kinase 5 activator activity0.0360978928605626
GO:0043539protein serine/threonine kinase activator activity0.0360978928605626
GO:0005153interleukin-8 receptor binding0.0360978928605626
GO:0044459plasma membrane part0.043073508145334
GO:0044421extracellular region part0.043073508145334
GO:0005887integral to plasma membrane0.043073508145334
GO:0048869cellular developmental process0.043073508145334
GO:0030154cell differentiation0.043073508145334
GO:0031226intrinsic to plasma membrane0.043073508145334
GO:0001958endochondral ossification0.0438517780456094
GO:0003702RNA polymerase II transcription factor activity0.0438517780456094
GO:0043005neuron projection0.0438517780456094
GO:0002376immune system process0.0438517780456094
GO:0022610biological adhesion0.0438517780456094
GO:0007155cell adhesion0.0438517780456094
GO:0042221response to chemical stimulus0.0438517780456094
GO:0031214biomineral formation0.0465434875206655
GO:0001503ossification0.0465434875206655
GO:0045091regulation of retroviral genome replication0.0465770583515556
GO:0004992platelet activating factor receptor activity0.0465770583515556
GO:0009888tissue development0.046601283594754
GO:0005125cytokine activity0.0477817720982678
GO:0009605response to external stimulus0.0487789974952223
GO:0046849bone remodeling0.0487789974952223
GO:0000185activation of MAPKKK activity0.0499910146372366
GO:0007413axonal fasciculation0.0499910146372366
GO:0019863IgE binding0.0499910146372366
GO:0007050cell cycle arrest0.0499910146372366



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Uber Anatomy
Ontology termp-valuen
spleen1.20e-103
gastrointestinal system mesentery1.20e-103
stomach region1.20e-103
mesentery1.20e-103
gastrointestinal system serosa1.20e-103
mesentery of stomach1.20e-103
gut mesentery1.20e-103
dorsal mesentery1.20e-103
dorsal mesogastrium1.20e-103
peritoneal cavity1.20e-103
spleen primordium1.20e-103
Disease
Ontology termp-valuen
genetic disease1.78e-291
monogenic disease1.78e-291
xeroderma pigmentosum1.78e-291


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.10
MA0004.10.487344
MA0006.15.00309e-07
MA0007.10.00188138
MA0009.10.643044
MA0014.10
MA0017.10.0874637
MA0019.10.111455
MA0024.10.00226518
MA0025.10.0678308
MA0027.10.756385
MA0028.15.14544e-06
MA0029.11.69297
MA0030.10.20248
MA0031.10.217575
MA0038.10.333409
MA0040.10.809718
MA0041.11.99444
MA0042.10.394534
MA0043.10.0354796
MA0046.17.93416
MA0048.11.42404e-08
MA0050.12.59708
MA0051.12.11578
MA0052.12.38842
MA0055.11.73171e-10
MA0056.10
MA0057.17.25607e-09
MA0058.10.0817349
MA0059.10.10352
MA0060.11.33194e-05
MA0061.113.7243
MA0063.10
MA0066.10.335401
MA0067.10.0450711
MA0068.13.8661e-05
MA0069.10.581087
MA0070.10.266868
MA0071.13.39415
MA0072.12.57665
MA0073.10
MA0074.10.00200854
MA0076.10.00730671
MA0077.10.4894
MA0078.10.949018
MA0081.10.314778
MA0083.10.015682
MA0084.10.338376
MA0087.10.509308
MA0088.18.56967e-10
MA0089.10
MA0090.10.405477
MA0091.10.506782
MA0092.10.564914
MA0093.10.59987
MA0095.10
MA0098.10
MA0100.10.000674552
MA0101.110.7528
MA0103.11.56549
MA0105.10.760742
MA0106.10.450142
MA0107.117.2562
MA0108.20.52969
MA0109.10
MA0111.10.191575
MA0113.10.804384
MA0114.10.0112878
MA0115.10.481917
MA0116.10.000252736
MA0117.10.00175605
MA0119.10.00150891
MA0122.10.365232
MA0124.10.381363
MA0125.13.48278
MA0130.10
MA0131.10.000212163
MA0132.10
MA0133.10
MA0135.11.53923
MA0136.11.46032
MA0139.11.08234e-08
MA0140.10.550493
MA0141.11.98043
MA0142.12.14465
MA0143.11.49933
MA0144.10.00202194
MA0145.16.29013e-07
MA0146.10
MA0147.15.76552e-05
MA0148.11.3778
MA0149.19.54273e-07
MA0062.23.36361e-07
MA0035.20.545465
MA0039.20
MA0138.20.00129351
MA0002.22.58887
MA0137.20.00839979
MA0104.23.33061e-08
MA0047.20.860405
MA0112.21.15255e-09
MA0065.22.78129e-07
MA0150.10.793839
MA0151.10
MA0152.10.839524
MA0153.12.46333
MA0154.11.43863
MA0155.12.7615e-07
MA0156.11.35847
MA0157.10.300458
MA0158.10
MA0159.10.0675526
MA0160.12.18476
MA0161.10
MA0162.10
MA0163.10
MA0164.11.06879
MA0080.22.68748
MA0018.20.00173601
MA0099.21.29173
MA0079.20
MA0102.20.0458751
MA0258.10.0099263
MA0259.10.00106931
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
BATF#105381255.810544320683126.14795752689728e-585.5352287599278e-55
BCL11A#533351568.44586831328761.42642083045046e-962.25718128956691e-93
BCL3#602422.769042591139335.1693590003207e-094.14975161133354e-07
BCLAF1#9774451.859483096289096.2638351521419e-050.00102505277257059
EBF1#18792794.742183683573964.37986746879324e-1239.33528527700607e-120
IRF4#36621205.018590691620796.47645568103747e-494.63283941693064e-46
MEF2A#42051294.614268678137567.17755183566203e-495.09943085826331e-46
MEF2C#4208544.25727698969791.00326652045117e-182.33884268145982e-16
NFKB1#47902582.702138098171771.41749566250207e-581.32180204907191e-55
PAX5#50791602.036508559138271.69950077097125e-194.12777118649922e-17
POLR2A#54303311.356501911146411.51239815465366e-142.58093710578224e-12
POU2F2#54521392.415555809210333.51336604151776e-231.04539155558425e-20
SPI1#66881402.191994830521341.52061891646789e-193.71055885553716e-17
TBP#69082561.810941404382971.25008097293857e-264.2805641551715e-24
TCF12#69381593.226870075281761.9868967865614e-411.17903132665731e-38
WRNIP1#56897275.658662285177781.07273286955412e-121.50382749212568e-10
ZEB1#6935451.450342444254720.00868400922653290.0329991718676273



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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