FFCP PHASE1:Mm9::chr1:74648122..74648132,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=269209|HGNC=|MCL_coexpression_id=0|UniProt=Q9D9B2|association_with_transcript=34bp_to_ENSMUST00000113694_5end|description=CAGE_peak_2_at_Stk36_5end|id=chr1:74648122..74648132,+|ontology_enrichment_celltype=CL:0000221!1.98e-07!44;CL:0000133!1.98e-07!44;CL:0000117!2.00e-07!23;CL:0000337!2.00e-07!23;CL:0000055!2.21e-07!50;CL:0002319!3.30e-07!43|ontology_enrichment_celltype_v019_2=CL:0000878,5.64e-12,2;CL:0000129,5.64e-12,2;CL:0002609,5.45e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.80e-11!71;UBERON:0003075!3.80e-11!71;UBERON:0007284!3.80e-11!71;UBERON:0003056!4.98e-11!49;UBERON:0001049!7.18e-10!52;UBERON:0005068!7.18e-10!52;UBERON:0006241!7.18e-10!52;UBERON:0007135!7.18e-10!52;UBERON:0004121!7.33e-10!102;UBERON:0000924!7.33e-10!102;UBERON:0006601!7.33e-10!102;UBERON:0000033!9.02e-10!63;UBERON:0001017!4.41e-09!73;UBERON:0005743!4.41e-09!73;UBERON:0000073!1.68e-08!75;UBERON:0001016!1.68e-08!75;UBERON:0000025!5.62e-08!114;UBERON:0002780!8.24e-08!39;UBERON:0001890!8.24e-08!39;UBERON:0006240!8.24e-08!39;UBERON:0003080!2.04e-07!40;UBERON:0002020!2.21e-07!34;UBERON:0004111!3.23e-07!122;UBERON:0002616!5.86e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.46e-09,21;UBERON:0001869,4.46e-09,21;UBERON:0000203,4.46e-09,21;UBERON:0003528,1.01e-08,29;UBERON:0002791,1.01e-08,29;UBERON:0001893,1.01e-08,29;UBERON:0002020,2.42e-07,34|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.65407546914134,1.09843091367236,0.194429899074283,0.839918529752175,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,1.49800055259202,1.53687322128622,2.7996195323289,2.97013064329719,1.26194976810829,0.571301968807607,0.220868540951614,0.122490799214954,0.383381884072945,0,0,0,0.153606533256243,0.527545150920775,0.823388792421687,2.08365348222704,0,0.56276261003168,0.45839474333043,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0.289864488701678,0,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0.260240885925407,0.689706313300419,0.360124259610698,0.60281927134286,0.612328492361951,0.512454881139399,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,1.66277871149944,0,0,0.339490171550376,0.469380496577004,1.34005005953453,0.476087281772027,0.780534591431195,0.157635144106191,0,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,1.45668381692989,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.646793418913773,0.428674070063185,0.177340233642274,0,0.658196082408484,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,24.2387963634202,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0.724752362478018,6.91272015018877,0,0,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.459483751644906,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0.231867835620421|short_description=p2@Stk36}} | ||
|EntrezGene=269209 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9D9B2 | |||
|association_with_transcript=34bp_to_ENSMUST00000113694_5end | |||
|description=CAGE_peak_2_at_Stk36_5end | |||
|id=chr1:74648122..74648132,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.98e-07!44;CL:0000133!1.98e-07!44;CL:0000117!2.00e-07!23;CL:0000337!2.00e-07!23;CL:0000055!2.21e-07!50;CL:0002319!3.30e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,5.64e-12,2;CL:0000129,5.64e-12,2;CL:0002609,5.45e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.80e-11!71;UBERON:0003075!3.80e-11!71;UBERON:0007284!3.80e-11!71;UBERON:0003056!4.98e-11!49;UBERON:0001049!7.18e-10!52;UBERON:0005068!7.18e-10!52;UBERON:0006241!7.18e-10!52;UBERON:0007135!7.18e-10!52;UBERON:0004121!7.33e-10!102;UBERON:0000924!7.33e-10!102;UBERON:0006601!7.33e-10!102;UBERON:0000033!9.02e-10!63;UBERON:0001017!4.41e-09!73;UBERON:0005743!4.41e-09!73;UBERON:0000073!1.68e-08!75;UBERON:0001016!1.68e-08!75;UBERON:0000025!5.62e-08!114;UBERON:0002780!8.24e-08!39;UBERON:0001890!8.24e-08!39;UBERON:0006240!8.24e-08!39;UBERON:0003080!2.04e-07!40;UBERON:0002020!2.21e-07!34;UBERON:0004111!3.23e-07!122;UBERON:0002616!5.86e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.46e-09,21;UBERON:0001869,4.46e-09,21;UBERON:0000203,4.46e-09,21;UBERON:0003528,1.01e-08,29;UBERON:0002791,1.01e-08,29;UBERON:0001893,1.01e-08,29;UBERON:0002020,2.42e-07,34 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.65407546914134,1.09843091367236,0.194429899074283,0.839918529752175,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,1.49800055259202,1.53687322128622,2.7996195323289,2.97013064329719,1.26194976810829,0.571301968807607,0.220868540951614,0.122490799214954,0.383381884072945,0,0,0,0.153606533256243,0.527545150920775,0.823388792421687,2.08365348222704,0,0.56276261003168,0.45839474333043,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0.289864488701678,0,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0.260240885925407,0.689706313300419,0.360124259610698,0.60281927134286,0.612328492361951,0.512454881139399,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,1.66277871149944,0,0,0.339490171550376,0.469380496577004,1.34005005953453,0.476087281772027,0.780534591431195,0.157635144106191,0,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,1.45668381692989,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.646793418913773,0.428674070063185,0.177340233642274,0,0.658196082408484,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,24.2387963634202,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0.724752362478018,6.91272015018877,0,0,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.459483751644906,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p2@Stk36 | |||
}} |
Revision as of 20:56, 13 September 2013
Short description: | p2@Stk36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stk36_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 34bp_to_ENSMUST00000113694_5end |
EntrezGene: | Stk36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 5.64e-12 | 2 |
microglial cell | 5.64e-12 | 2 |
neuron of cerebral cortex | 5.45e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.46e-09 | 21 |
cerebral hemisphere | 4.46e-09 | 21 |
pallium | 4.46e-09 | 21 |
brain grey matter | 1.01e-08 | 29 |
regional part of telencephalon | 1.01e-08 | 29 |
telencephalon | 1.01e-08 | 29 |
gray matter | 2.42e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.