FFCP PHASE1:Mm9::chr13:60965734..60965798,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=214639|HGNC=|MCL_coexpression_id=56|UniProt=Q80UB0|association_with_transcript=0bp_to_ENSMUST00000091569,NM_178098,uc007qvs.1_5end|description=CAGE_peak_1_at_4930486L24Rik_5end|id=chr13:60965734..60965798,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!4.94e-17!24;UBERON:0005156!2.71e-15!26;UBERON:0000990!2.71e-15!26;UBERON:0000991!6.70e-14!18;UBERON:0005564!6.70e-14!18;UBERON:0000473!9.91e-14!14;UBERON:0004176!8.52e-13!17;UBERON:0009196!8.52e-13!17;UBERON:0009117!8.52e-13!17;UBERON:0003135!1.38e-12!15;UBERON:0003101!1.37e-11!16;UBERON:0000079!1.37e-11!16;UBERON:0002369!5.79e-11!7;UBERON:0006858!5.79e-11!7;UBERON:0002323!5.98e-10!37;UBERON:0004458!5.98e-10!37;UBERON:0003886!1.51e-09!38;UBERON:0002553!3.62e-09!39;UBERON:0002342!3.28e-07!10;UBERON:0005062!3.28e-07!10;UBERON:0003064!3.84e-07!14;UBERON:0005795!6.10e-07!4;UBERON:0000995!6.10e-07!4;UBERON:0000464!8.49e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0003133,9.94e-24,24;UBERON:0005156,1.11e-21,26;UBERON:0000990,1.11e-21,26;UBERON:0000473,5.19e-21,14;UBERON:0004176,1.56e-20,17;UBERON:0009196,1.56e-20,17;UBERON:0009117,1.56e-20,17;UBERON:0003135,1.73e-19,15;UBERON:0000991,2.82e-19,18;UBERON:0005564,2.82e-19,18;UBERON:0003101,3.71e-18,16;UBERON:0000079,3.71e-18,16;UBERON:0002369,2.21e-16,7;UBERON:0006858,2.21e-16,7;UBERON:0000926,5.38e-12,120;UBERON:0004120,5.38e-12,120;UBERON:0006603,5.38e-12,120;UBERON:0005631,3.66e-11,3;UBERON:0000478,3.66e-11,3;UBERON:0000158,3.66e-11,3;UBERON:0002323,6.32e-10,37;UBERON:0004458,6.32e-10,37;UBERON:0003886,1.33e-09,38;UBERON:0002553,2.68e-09,39;UBERON:0005795,1.55e-08,4;UBERON:0000995,1.55e-08,4;UBERON:0001987,4.37e-08,2;UBERON:0003124,4.37e-08,2;UBERON:0004340,4.37e-08,2;UBERON:0003064,7.20e-08,14;UBERON:0003134,5.89e-07,8;UBERON:0003975,6.81e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,1.28482726513177,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,1.03914401841148,1.41335829804136,0,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.29688427812965,10.235634279202,14.3098774806706,10.3776973765226,11.0027527603414,15.0513545133702,31.1653146497595,15.8204779349999,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,1.25673363870702,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95506417520516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03486947026204,0,0,0,0,0,141.976383378545,122.862601101016,0,0,0,0,0,0,0,0,0.854354403989263,0,1.48155621895769,0.376736914009382,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,4.63501292736334,8.43838301331198,10.5003641705786,10.7202653486517,13.1785777882807,19.0118726606121,11.8485990207995,8.07416952077974,15.7029678536904,4.32045009386798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,94.4042851519445,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p1@4930486L24Rik}} | ||
|EntrezGene=214639 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=Q80UB0 | |||
|association_with_transcript=0bp_to_ENSMUST00000091569,NM_178098,uc007qvs.1_5end | |||
|description=CAGE_peak_1_at_4930486L24Rik_5end | |||
|id=chr13:60965734..60965798,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!4.94e-17!24;UBERON:0005156!2.71e-15!26;UBERON:0000990!2.71e-15!26;UBERON:0000991!6.70e-14!18;UBERON:0005564!6.70e-14!18;UBERON:0000473!9.91e-14!14;UBERON:0004176!8.52e-13!17;UBERON:0009196!8.52e-13!17;UBERON:0009117!8.52e-13!17;UBERON:0003135!1.38e-12!15;UBERON:0003101!1.37e-11!16;UBERON:0000079!1.37e-11!16;UBERON:0002369!5.79e-11!7;UBERON:0006858!5.79e-11!7;UBERON:0002323!5.98e-10!37;UBERON:0004458!5.98e-10!37;UBERON:0003886!1.51e-09!38;UBERON:0002553!3.62e-09!39;UBERON:0002342!3.28e-07!10;UBERON:0005062!3.28e-07!10;UBERON:0003064!3.84e-07!14;UBERON:0005795!6.10e-07!4;UBERON:0000995!6.10e-07!4;UBERON:0000464!8.49e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,9.94e-24,24;UBERON:0005156,1.11e-21,26;UBERON:0000990,1.11e-21,26;UBERON:0000473,5.19e-21,14;UBERON:0004176,1.56e-20,17;UBERON:0009196,1.56e-20,17;UBERON:0009117,1.56e-20,17;UBERON:0003135,1.73e-19,15;UBERON:0000991,2.82e-19,18;UBERON:0005564,2.82e-19,18;UBERON:0003101,3.71e-18,16;UBERON:0000079,3.71e-18,16;UBERON:0002369,2.21e-16,7;UBERON:0006858,2.21e-16,7;UBERON:0000926,5.38e-12,120;UBERON:0004120,5.38e-12,120;UBERON:0006603,5.38e-12,120;UBERON:0005631,3.66e-11,3;UBERON:0000478,3.66e-11,3;UBERON:0000158,3.66e-11,3;UBERON:0002323,6.32e-10,37;UBERON:0004458,6.32e-10,37;UBERON:0003886,1.33e-09,38;UBERON:0002553,2.68e-09,39;UBERON:0005795,1.55e-08,4;UBERON:0000995,1.55e-08,4;UBERON:0001987,4.37e-08,2;UBERON:0003124,4.37e-08,2;UBERON:0004340,4.37e-08,2;UBERON:0003064,7.20e-08,14;UBERON:0003134,5.89e-07,8;UBERON:0003975,6.81e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,1.28482726513177,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,1.03914401841148,1.41335829804136,0,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.29688427812965,10.235634279202,14.3098774806706,10.3776973765226,11.0027527603414,15.0513545133702,31.1653146497595,15.8204779349999,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,1.25673363870702,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95506417520516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03486947026204,0,0,0,0,0,141.976383378545,122.862601101016,0,0,0,0,0,0,0,0,0.854354403989263,0,1.48155621895769,0.376736914009382,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,4.63501292736334,8.43838301331198,10.5003641705786,10.7202653486517,13.1785777882807,19.0118726606121,11.8485990207995,8.07416952077974,15.7029678536904,4.32045009386798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,94.4042851519445,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p1@4930486L24Rik | |||
}} |
Revision as of 00:58, 13 September 2013
Short description: | p1@4930486L24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_4930486L24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000091569, NM_178098, uc007qvs.1_5end |
EntrezGene: | 4930486L24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 9.94e-24 | 24 |
reproductive structure | 1.11e-21 | 26 |
reproductive system | 1.11e-21 | 26 |
testis | 5.19e-21 | 14 |
external genitalia | 1.56e-20 | 17 |
indifferent external genitalia | 1.56e-20 | 17 |
indifferent gonad | 1.56e-20 | 17 |
male reproductive organ | 1.73e-19 | 15 |
gonad | 2.82e-19 | 18 |
gonad primordium | 2.82e-19 | 18 |
male organism | 3.71e-18 | 16 |
male reproductive system | 3.71e-18 | 16 |
adrenal gland | 2.21e-16 | 7 |
adrenal/interrenal gland | 2.21e-16 | 7 |
mesoderm | 5.38e-12 | 120 |
mesoderm-derived structure | 5.38e-12 | 120 |
presumptive mesoderm | 5.38e-12 | 120 |
extraembryonic membrane | 3.66e-11 | 3 |
extraembryonic structure | 3.66e-11 | 3 |
membranous layer | 3.66e-11 | 3 |
body cavity | 6.32e-10 | 37 |
body cavity or lining | 6.32e-10 | 37 |
body cavity precursor | 1.33e-09 | 38 |
anatomical cavity | 2.68e-09 | 39 |
embryonic uterus | 1.55e-08 | 4 |
uterus | 1.55e-08 | 4 |
placenta | 4.37e-08 | 2 |
chorion | 4.37e-08 | 2 |
allantois | 4.37e-08 | 2 |
intermediate mesoderm | 7.20e-08 | 14 |
female reproductive organ | 5.89e-07 | 8 |
internal female genitalia | 6.81e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.