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FFCP PHASE1:Mm9::chr3:50247500..50247514,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=26570|HGNC=|MCL_coexpression_id=6|UniProt=Q9WTR6,Q542C8,Q8BYV9|association_with_transcript=20bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end|description=CAGE_peak_1_at_Slc7a11_5end|id=chr3:50247500..50247514,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.06e-14!94;UBERON:0007811!6.69e-13!86;UBERON:0000033!3.96e-12!63;UBERON:0002346!3.56e-10!71;UBERON:0003075!3.56e-10!71;UBERON:0007284!3.56e-10!71;UBERON:0001049!6.16e-10!52;UBERON:0005068!6.16e-10!52;UBERON:0006241!6.16e-10!52;UBERON:0007135!6.16e-10!52;UBERON:0000955!7.27e-10!50;UBERON:0006238!7.27e-10!50;UBERON:0002616!2.18e-09!49;UBERON:0003056!2.29e-09!49;UBERON:0004121!7.81e-09!102;UBERON:0000924!7.81e-09!102;UBERON:0006601!7.81e-09!102;UBERON:0002020!1.09e-07!34;UBERON:0000073!7.11e-07!75;UBERON:0001016!7.11e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.26e-10,64;UBERON:0003075,2.26e-10,64;UBERON:0007284,2.26e-10,64;UBERON:0010371,1.35e-09,73;UBERON:0000073,1.66e-09,54;UBERON:0004121,2.13e-09,95;UBERON:0000924,2.13e-09,95;UBERON:0006601,2.13e-09,95;UBERON:0001049,1.08e-08,52;UBERON:0005068,1.08e-08,52;UBERON:0006241,1.08e-08,52;UBERON:0007135,1.08e-08,52;UBERON:0003056,2.33e-08,49;UBERON:0000955,1.88e-07,47;UBERON:0006238,1.88e-07,47;UBERON:0002020,4.36e-07,34;UBERON:0002616,5.36e-07,46;UBERON:0001016,7.88e-07,75|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,0,1.267098499365,0.70219357896598,3.93801326918661,3.66951931378547,0,0,2.33176833270964,3.03712901084739,0.699561878128147,1.10411757875383,0.548457734422955,0.42438965179803,4.67738095830884,0.893618560807968,0.261199789138935,1.75991665072747,2.2940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.886922042621219,2.54012269383853,1.23012957516914,0,0,0,0,87.4731108240137,75.0081930742848,17.7998072951091,821.171157291296,215.842373246869,113.60942260929,1.1330713617802,0.912392380975631,0.917733760808408,31.2956537739216,0.872100625521786,0.659058548203415,1.1665793944457,7.27929392451885,0,0,0,0,1.80081605225163,0.85960031981627,0.515672092277442,0,0.528990979272033,2.53532561402472,43.0332555727798,52.4683929705572,4.49949858640699,1.97773272513395,3.5524005747305,23.0692085099172,13.4476406862544,1.34796496001021,1.4850653216486,1.26194976810829,4.57041575046086,8.61387309711293,0.734944795289724,0.766763768145891,1.83843757322004,16.5173821499083,15.3224805702225,13.5173749265494,0.659431438650969,0.731901148819277,3.12548022334056,11.1673199600552,30.9519435517424,41.2555268997387,11.1958862479994,6.83384067835694,5.21918448310842,10.3744884866462,9.14415877292105,0,0,5.439770669662,0,0,0,2.94933282276679,0.170430322578058,0,0,0,0,0,0,34.8550576028055,32.9367825117628,37.9143333761088,2.16949371466214,17.3488382043605,1.48442139064825,2.94925055502431,1.82679286987285,1.15307748628029,0.753613202763113,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,1.86391761218122,11.1256702864388,15.4990563041957,1.02182822083437,4.79260498023681,5.39912457894067,5.46401976414178,31.1564529962031,18.7575247155637,3.01570445070875,32.3313235557634,26.8501230196847,23.4800490352303,21.2536054618763,0.203678727700633,5.47390670684409,14.6579199891531,200.130204948037,5.46505860443356,8.73627996847197,8.82304436046211,4.52114453507145,5.51095643125756,9.99287018221828,7.30873451565885,41.3925393182425,1.5089759505299,1.70195472151037,2.46331573829528,2.84954452155847,6.95118123063995,6.96504333044333,4.11564272815887,0.398068533636986,2.80885274925294,2.83082697826187,8.52490498186778,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0.350296027101508,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,37.6419007929788,7.82075054082562,0.991256348951394,0.528901133327089,0,0,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,0,0,0,1.50755631697634,0.476087281772027,0.390267295715598,1.41871629695572,0.221464689648775,0.797273843287435,1.47476983244164,0.863424909329478,1.15719246865209,0,1.63171705145613,0.491764273019036,0.551873492609465,30.6651626876683,17.6989646754227,1.47541450839008,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,29.5615611108062,3.40656204499845,0,0.651547837414304,14.6823409445557,10.619611067197,0,0,0.377210159511796,2.36241514304618,0.922305443831782,2.32585463851399,1.45413491791002,1.78248689192361,6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|EntrezGene=26570
|HGNC=
|MCL_coexpression_id=6
|UniProt=Q9WTR6,Q542C8,Q8BYV9
|association_with_transcript=20bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end
|description=CAGE_peak_1_at_Slc7a11_5end
|id=chr3:50247500..50247514,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.06e-14!94;UBERON:0007811!6.69e-13!86;UBERON:0000033!3.96e-12!63;UBERON:0002346!3.56e-10!71;UBERON:0003075!3.56e-10!71;UBERON:0007284!3.56e-10!71;UBERON:0001049!6.16e-10!52;UBERON:0005068!6.16e-10!52;UBERON:0006241!6.16e-10!52;UBERON:0007135!6.16e-10!52;UBERON:0000955!7.27e-10!50;UBERON:0006238!7.27e-10!50;UBERON:0002616!2.18e-09!49;UBERON:0003056!2.29e-09!49;UBERON:0004121!7.81e-09!102;UBERON:0000924!7.81e-09!102;UBERON:0006601!7.81e-09!102;UBERON:0002020!1.09e-07!34;UBERON:0000073!7.11e-07!75;UBERON:0001016!7.11e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.26e-10,64;UBERON:0003075,2.26e-10,64;UBERON:0007284,2.26e-10,64;UBERON:0010371,1.35e-09,73;UBERON:0000073,1.66e-09,54;UBERON:0004121,2.13e-09,95;UBERON:0000924,2.13e-09,95;UBERON:0006601,2.13e-09,95;UBERON:0001049,1.08e-08,52;UBERON:0005068,1.08e-08,52;UBERON:0006241,1.08e-08,52;UBERON:0007135,1.08e-08,52;UBERON:0003056,2.33e-08,49;UBERON:0000955,1.88e-07,47;UBERON:0006238,1.88e-07,47;UBERON:0002020,4.36e-07,34;UBERON:0002616,5.36e-07,46;UBERON:0001016,7.88e-07,75
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,0,1.267098499365,0.70219357896598,3.93801326918661,3.66951931378547,0,0,2.33176833270964,3.03712901084739,0.699561878128147,1.10411757875383,0.548457734422955,0.42438965179803,4.67738095830884,0.893618560807968,0.261199789138935,1.75991665072747,2.2940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.886922042621219,2.54012269383853,1.23012957516914,0,0,0,0,87.4731108240137,75.0081930742848,17.7998072951091,821.171157291296,215.842373246869,113.60942260929,1.1330713617802,0.912392380975631,0.917733760808408,31.2956537739216,0.872100625521786,0.659058548203415,1.1665793944457,7.27929392451885,0,0,0,0,1.80081605225163,0.85960031981627,0.515672092277442,0,0.528990979272033,2.53532561402472,43.0332555727798,52.4683929705572,4.49949858640699,1.97773272513395,3.5524005747305,23.0692085099172,13.4476406862544,1.34796496001021,1.4850653216486,1.26194976810829,4.57041575046086,8.61387309711293,0.734944795289724,0.766763768145891,1.83843757322004,16.5173821499083,15.3224805702225,13.5173749265494,0.659431438650969,0.731901148819277,3.12548022334056,11.1673199600552,30.9519435517424,41.2555268997387,11.1958862479994,6.83384067835694,5.21918448310842,10.3744884866462,9.14415877292105,0,0,5.439770669662,0,0,0,2.94933282276679,0.170430322578058,0,0,0,0,0,0,34.8550576028055,32.9367825117628,37.9143333761088,2.16949371466214,17.3488382043605,1.48442139064825,2.94925055502431,1.82679286987285,1.15307748628029,0.753613202763113,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,1.86391761218122,11.1256702864388,15.4990563041957,1.02182822083437,4.79260498023681,5.39912457894067,5.46401976414178,31.1564529962031,18.7575247155637,3.01570445070875,32.3313235557634,26.8501230196847,23.4800490352303,21.2536054618763,0.203678727700633,5.47390670684409,14.6579199891531,200.130204948037,5.46505860443356,8.73627996847197,8.82304436046211,4.52114453507145,5.51095643125756,9.99287018221828,7.30873451565885,41.3925393182425,1.5089759505299,1.70195472151037,2.46331573829528,2.84954452155847,6.95118123063995,6.96504333044333,4.11564272815887,0.398068533636986,2.80885274925294,2.83082697826187,8.52490498186778,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0.350296027101508,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,37.6419007929788,7.82075054082562,0.991256348951394,0.528901133327089,0,0,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,0,0,0,1.50755631697634,0.476087281772027,0.390267295715598,1.41871629695572,0.221464689648775,0.797273843287435,1.47476983244164,0.863424909329478,1.15719246865209,0,1.63171705145613,0.491764273019036,0.551873492609465,30.6651626876683,17.6989646754227,1.47541450839008,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,29.5615611108062,3.40656204499845,0,0.651547837414304,14.6823409445557,10.619611067197,0,0,0.377210159511796,2.36241514304618,0.922305443831782,2.32585463851399,1.45413491791002,1.78248689192361,6.32073515871632,8.4334886859999,8.25084345985495,0.340439605753788,0.900305470156551,0.517434735131018,1.28602221018955,2.48276327099183,2.14042581122485,3.9491764944509,0.304464949114599,0,0.42366414172764,1.32317038832977,3.62749756471256,2.42196640043858,2.35220407219808,5.37175548014114,13.1312719796049,1.45740418314925,12.6089205367147,8.03093139749908,0.412773735926445,2.40752885580625,0.565105371014073,5.60446333656203,7.54967971581525,17.3377998593732,11.1961161858926,10.3649980353318,6.68269432610579,0.158167996790568,0,0.108005340821801,0.627264888043406,2.18362563746178,4.18079473792944,1.81837602595739,6.54389854960074,0.388844919875379,1.24267862617385,2.81846469342095,0.598066184175915,0.496375471371293,3.88902376688095,3.48731523389874,1.68956125490778,0,0.13020438484395,0,2.41584120826006,1.72818003754719,46.137623611714,0.202725215290164,0.308132871494482,0.909445760844565,7.51912121803422,18.4773659946576,16.3465811347158,17.4273642066001,27.1599750360517,33.1499608949249,31.9619006883784,30.7966903137618,25.4961380346873,71.9961717438465,11.789979947991,0,0.0897138566094757,0.167884616364078,0.965947970160952,1.50145980360946,20.3298302936664,4.50173596066038,0.501572104035363,19.2015626489803,22.5559365888517,13.7494923225455,23.7157391634289,23.9778881919725,25.6833925112498,22.2757425076496,19.8141329418657,14.5005570874945,19.1571315348173,1.03787347584177,0.798049746802062,1.53660245178721,5.10524105843418,2.09613162627982,1.654591576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|short_description=p1@Slc7a11
}}

Revision as of 02:14, 14 September 2013

Short description:p1@Slc7a11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc7a11_5end
Coexpression cluster:MCL_coexpression_mm9:6
Association with transcript: 20bp_to_ENSMUST00000029297, ENSMUST00000142932, NM_011990, uc008pdi.1, uc008pdj.1_5end
EntrezGene:Slc7a11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc7a11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.67
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G887.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H175.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9821.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2215.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4113.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B731.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C643.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D152.47
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C823.07
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D910.37
Mouse Schwann, donor2.CNhs12573.11746-123F99.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G134.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G232.94
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G337.91
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H917.35
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I215.50
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.46
corpora quadrigemina, adult.CNhs10501.16-22A431.16
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D532.33
cortex, neonate N30.CNhs11107.1392-42F226.85
diencephalon, adult.CNhs10482.20-12F223.48
diencephalon, neonate N30.CNhs11201.1388-42B221.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G4200.13
eyeball, embryo E12.CNhs11016.345-16C65.47
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C98.82
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C65.51
eyeball, neonate N01.CNhs11140.1532-43E79.99
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A241.39
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E76.95
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.52
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E837.64
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C230.67
medulla oblongata, neonate N30.CNhs11200.1396-42A317.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I929.56
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G614.68
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C413.13
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C912.61
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H15.60
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.36
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B546.14
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G418.48
thymus, neonate N02.CNhs11181.1541-43F816.35
thymus, neonate N03.CNhs11137.2104-43C717.43
thymus, neonate N06.CNhs11197.681-26C427.16
thymus, neonate N07.CNhs11211.713-19D333.15
thymus, neonate N10.CNhs11194.748-24E431.96
thymus, neonate N20.CNhs11186.820-7A230.80
thymus, neonate N25.CNhs11125.1362-25G725.50
thymus, neonate N30.CNhs11132.1393-42G272.00
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E520.33
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.26e-1064
neural plate2.26e-1064
presumptive neural plate2.26e-1064
ecto-epithelium1.35e-0973
regional part of nervous system1.66e-0954
ectoderm-derived structure2.13e-0995
ectoderm2.13e-0995
presumptive ectoderm2.13e-0995
neural tube1.08e-0852
neural rod1.08e-0852
future spinal cord1.08e-0852
neural keel1.08e-0852
pre-chordal neural plate2.33e-0849
brain1.88e-0747
future brain1.88e-0747
gray matter4.36e-0734
regional part of brain5.36e-0746
nervous system7.88e-0775







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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