FFCP PHASE1:Mm9::chr4:147183911..147183930,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100041677|HGNC=|MCL_coexpression_id=177|UniProt=A2A7A2|association_with_transcript=-14bp_to_NM_001127189_5end|description=CAGE_peak_1_at_Gm13157_5end|id=chr4:147183911..147183930,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.79e-12!193;UBERON:0004120!1.79e-12!193;UBERON:0006603!1.79e-12!193;UBERON:0003104!9.48e-09!131;UBERON:0009142!9.48e-09!131;UBERON:0004119!5.53e-08!130;UBERON:0000925!5.53e-08!130;UBERON:0006595!5.53e-08!130;UBERON:0001007!1.21e-07!128;UBERON:0001555!1.21e-07!128;UBERON:0007026!1.21e-07!128;UBERON:0004921!1.60e-07!126;UBERON:0004185!1.60e-07!126;UBERON:0003081!4.69e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.02e-07,120;UBERON:0004120,2.02e-07,120;UBERON:0006603,2.02e-07,120;UBERON:0003081,4.55e-07,87|phase1_expression=0.320297694209588,1.74487703819681,1.36499771816861,0.60492842261366,1.00179145989269,1.17515490338323,1.86890112476421,1.93684985162364,0.703943610758334,0.234064526321993,2.39705155515707,2.71225340584144,3.42401459862411,1.39872643870396,8.32774404539157,3.23960427823721,0,8.99067171270977,8.22686601634433,5.51706547337439,1.7008658030214,8.43973085207525,5.48519557191764,3.19984845586813,1.83527424853736,2.29692785646008,2.15380998079537,2.80112602491656,1.90023419456374,2.52030129759931,1.33038306393183,0,0,0,1.44425809875637,3.49092755252834,2.6542016314108,17.1597968602132,8.5946887897618,9.42342739152837,13.5293242247133,21.8574555186703,17.4783727091215,2.14024590558481,2.93993100536592,2.56965453026354,0,0.436050312760893,0,0.194429899074283,0,0,4.86569557567435,2.17608642603403,3.6970317905671,0.514518872071894,0.573066879877513,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0,0,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.681535739998656,1.058001841495,5.2175607966302,1.72084775396277,0,0,0.649776417447669,0.448026887097336,2.10666630197628,2.38602451609281,1.81850203222008,4.94675404314476,0.563373679106722,2.56652954828636,0,0,0.649473123033642,1.26679932737549,0,1.25602267690966,33.6619248741323,2.52351636410202,1.73485326766136,1.21786191324856,0.461230994512117,1.3565037649736,5.17390311397101,2.26199864393416,3.21353458054686,3.47038456607788,3.5384422077995,2.26473589926373,4.19598885074748,5.81850303762267,0,0.585561594023094,0.83778682725382,4.59822699375465,2.03685711660064,1.79970819298022,2.79554499560742,0.149790639404823,0.915001205637253,1.13088916901578,0.521472960576829,0,0,0.648965052271031,2.85150218780886,6.84238338355512,4.54900965180614,5.26104639716185,1.69156575851515,0.689706313300419,1.98068342785884,1.50704817835715,2.38127747029647,0.768682321709099,2.81105173679186,3.10444044886819,0.646703978798527,3.40390944302075,1.23165786914764,1.31517439456545,1.94633074457919,2.78601733217733,1.85203922767149,1.59227413454795,2.1066395619397,2.05878325691772,1.70498099637356,6.21377317606506,3.28336483973535,2.52086886045421,4.7348947117042,1.37734962223183,2.00547246753592,2.79040733700489,2.68273401399619,7.94004328096752,3.29119699826961,4.26835406605648,4.45878452502207,3.65499968563331,1.75640092232841,4.02619256281115,0.210289948564127,1.44066457330998,1.98251269790279,1.05780226665418,0.853153002140936,1.39342003116263,2.57734922644187,4.84040459096022,5.11469500843202,3.99473814836374,3.32170343081158,5.43506550589236,8.79673230800943,10.9426059622633,4.28920991662064,2.69645822596266,5.18731319699266,2.58883655230677,0.379335801906163,2.51346727741403,2.25415471346161,2.44381593414377,2.90928730751439,3.64706263429657,6.00747102680444,5.75679577120448,2.35498091762062,4.31890073726302,0.889357881261447,4.17112764290235,3.73462090715086,2.9232074610031,3.04290182082754,1.68824011826692,1.2731292589071,2.5892652370573,4.05338066937588,1.09824565275233,1.43768206527355,1.11642284300551,1.5601883655728,1.01031551178845,2.51156378930677,0.964887042726734,9.60716588866344,1.13694847062291,2.93336957595647,2.20668611507745,1.17345124144251,2.51259386162724,4.76087281772027,6.82967767502296,3.15270288212382,7.52979944805835,9.72674088810671,10.1595255123758,11.569893785015,11.5719246865209,3.01582567878545,4.89515115436839,3.93411418415229,3.31124095565679,0.321101179975584,1.28932855251423,0.327869890753351,2.01976741763498,0.94652465824877,0.390438744296638,2.58508077279359,0.955875191810208,2.22798674082394,1.69845918473299,2.42886421004937,1.75353514746787,2.37172666767914,1.28528526568723,3.12268187458191,1.06839362200353,3.4206261464251,5.60898418106621,9.2921596837974,2.42780636154981,2.11626489875326,2.26326095707078,0.295301892880773,3.07435147943927,3.87642439752332,5.81653967164009,6.77345018930971,2.52829406348653,1.05418608574999,4.12542172992747,1.70219802876894,0.720244376125241,0.258717367565509,1.28602221018955,1.41872186913819,0.178368817602071,0.493647061806363,0.608929898229199,6.33613611772018,2.11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| ||
|EntrezGene=100041677 | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|UniProt=A2A7A2 | |||
|association_with_transcript=-14bp_to_NM_001127189_5end | |||
|description=CAGE_peak_1_at_Gm13157_5end | |||
|id=chr4:147183911..147183930,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.79e-12!193;UBERON:0004120!1.79e-12!193;UBERON:0006603!1.79e-12!193;UBERON:0003104!9.48e-09!131;UBERON:0009142!9.48e-09!131;UBERON:0004119!5.53e-08!130;UBERON:0000925!5.53e-08!130;UBERON:0006595!5.53e-08!130;UBERON:0001007!1.21e-07!128;UBERON:0001555!1.21e-07!128;UBERON:0007026!1.21e-07!128;UBERON:0004921!1.60e-07!126;UBERON:0004185!1.60e-07!126;UBERON:0003081!4.69e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.02e-07,120;UBERON:0004120,2.02e-07,120;UBERON:0006603,2.02e-07,120;UBERON:0003081,4.55e-07,87 | |||
|phase1_expression=0.320297694209588,1.74487703819681,1.36499771816861,0.60492842261366,1.00179145989269,1.17515490338323,1.86890112476421,1.93684985162364,0.703943610758334,0.234064526321993,2.39705155515707,2.71225340584144,3.42401459862411,1.39872643870396,8.32774404539157,3.23960427823721,0,8.99067171270977,8.22686601634433,5.51706547337439,1.7008658030214,8.43973085207525,5.48519557191764,3.19984845586813,1.83527424853736,2.29692785646008,2.15380998079537,2.80112602491656,1.90023419456374,2.52030129759931,1.33038306393183,0,0,0,1.44425809875637,3.49092755252834,2.6542016314108,17.1597968602132,8.5946887897618,9.42342739152837,13.5293242247133,21.8574555186703,17.4783727091215,2.14024590558481,2.93993100536592,2.56965453026354,0,0.436050312760893,0,0.194429899074283,0,0,4.86569557567435,2.17608642603403,3.6970317905671,0.514518872071894,0.573066879877513,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0,0,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.681535739998656,1.058001841495,5.2175607966302,1.72084775396277,0,0,0.649776417447669,0.448026887097336,2.10666630197628,2.38602451609281,1.81850203222008,4.94675404314476,0.563373679106722,2.56652954828636,0,0,0.649473123033642,1.26679932737549,0,1.25602267690966,33.6619248741323,2.52351636410202,1.73485326766136,1.21786191324856,0.461230994512117,1.3565037649736,5.17390311397101,2.26199864393416,3.21353458054686,3.47038456607788,3.5384422077995,2.26473589926373,4.19598885074748,5.81850303762267,0,0.585561594023094,0.83778682725382,4.59822699375465,2.03685711660064,1.79970819298022,2.79554499560742,0.149790639404823,0.915001205637253,1.13088916901578,0.521472960576829,0,0,0.648965052271031,2.85150218780886,6.84238338355512,4.54900965180614,5.26104639716185,1.69156575851515,0.689706313300419,1.98068342785884,1.50704817835715,2.38127747029647,0.768682321709099,2.81105173679186,3.10444044886819,0.646703978798527,3.40390944302075,1.23165786914764,1.31517439456545,1.94633074457919,2.78601733217733,1.85203922767149,1.59227413454795,2.1066395619397,2.05878325691772,1.70498099637356,6.21377317606506,3.28336483973535,2.52086886045421,4.7348947117042,1.37734962223183,2.00547246753592,2.79040733700489,2.68273401399619,7.94004328096752,3.29119699826961,4.26835406605648,4.45878452502207,3.65499968563331,1.75640092232841,4.02619256281115,0.210289948564127,1.44066457330998,1.98251269790279,1.05780226665418,0.853153002140936,1.39342003116263,2.57734922644187,4.84040459096022,5.11469500843202,3.99473814836374,3.32170343081158,5.43506550589236,8.79673230800943,10.9426059622633,4.28920991662064,2.69645822596266,5.18731319699266,2.58883655230677,0.379335801906163,2.51346727741403,2.25415471346161,2.44381593414377,2.90928730751439,3.64706263429657,6.00747102680444,5.75679577120448,2.35498091762062,4.31890073726302,0.889357881261447,4.17112764290235,3.73462090715086,2.9232074610031,3.04290182082754,1.68824011826692,1.2731292589071,2.5892652370573,4.05338066937588,1.09824565275233,1.43768206527355,1.11642284300551,1.5601883655728,1.01031551178845,2.51156378930677,0.964887042726734,9.60716588866344,1.13694847062291,2.93336957595647,2.20668611507745,1.17345124144251,2.51259386162724,4.76087281772027,6.82967767502296,3.15270288212382,7.52979944805835,9.72674088810671,10.1595255123758,11.569893785015,11.5719246865209,3.01582567878545,4.89515115436839,3.93411418415229,3.31124095565679,0.321101179975584,1.28932855251423,0.327869890753351,2.01976741763498,0.94652465824877,0.390438744296638,2.58508077279359,0.955875191810208,2.22798674082394,1.69845918473299,2.42886421004937,1.75353514746787,2.37172666767914,1.28528526568723,3.12268187458191,1.06839362200353,3.4206261464251,5.60898418106621,9.2921596837974,2.42780636154981,2.11626489875326,2.26326095707078,0.295301892880773,3.07435147943927,3.87642439752332,5.81653967164009,6.77345018930971,2.52829406348653,1.05418608574999,4.12542172992747,1.70219802876894,0.720244376125241,0.258717367565509,1.28602221018955,1.41872186913819,0.178368817602071,0.493647061806363,0.608929898229199,6.33613611772018,2.1183207086382,3.96951116498931,5.60613260001032,2.74489525383039,3.67908842061751,2.86493625607528,1.80554989719567,2.33184669303881,0.927126510052548,5.80960994712699,0.412773735926445,4.07427960213366,4.89757988212197,4.51090951479383,7.77845788902177,2.37969801991397,4.05859211738608,1.79659965945751,6.68269432610579,3.16335993581135,1.21991680276109,2.26811215725783,2.09088296014469,0.87345025498471,2.83215127408124,2.56225712748541,5.23511883968059,3.11075935900303,4.34937519160848,0,1.19613236835183,0.496375471371293,0.583353565032143,1.03327858782185,1.85851738039856,4.3422178298929,2.73429208172295,3.04092098834561,0.966336483304024,2.88030006257865,4.4241556887945,2.02725215290164,3.3894615864393,3.76770386635606,5.54982756569192,5.76175928865668,5.52899067791857,6.20296014133224,8.17828244579996,4.57240839929999,9.07435666231565,4.77543615624787,6.34998154826174,7.36324483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| |||
|short_description=p1@Gm13157 | |||
}} | |||
Revision as of 04:24, 14 September 2013
| Short description: | p1@Gm13157 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gm13157_5end |
| Coexpression cluster: | MCL_coexpression_mm9:177 |
| Association with transcript: | -14bp_to_NM_001127189_5end |
| EntrezGene: | Gm13157 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 2.02e-07 | 120 |
| mesoderm-derived structure | 2.02e-07 | 120 |
| presumptive mesoderm | 2.02e-07 | 120 |
| lateral plate mesoderm | 4.55e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
