FFCP PHASE1:Mm9::chr9:57385390..57385441,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78323|HGNC=|MCL_coexpression_id=286|UniProt=Q14DQ1|association_with_transcript=55bp_to_ENSMUST00000093833,ENSMUST00000114200,NM_001166364,NM_175273,uc009pva.2,uc009pvb.2_5end|description=CAGE_peak_1_at_2310046O06Rik_5end|id=chr9:57385390..57385441,+|ontology_enrichment_celltype=CL:0000055!1.97e-12!50;CL:0000221!2.40e-12!44;CL:0000133!2.40e-12!44;CL:0002319!5.78e-12!43;CL:0002321!2.98e-10!70;CL:0000220!2.98e-10!70;CL:0000393!1.74e-09!39;CL:0000211!1.74e-09!39;CL:0000723!1.80e-09!91;CL:0000048!1.80e-09!91;CL:0000117!2.30e-09!23;CL:0000337!2.30e-09!23;CL:0000540!1.43e-08!33;CL:0000047!1.43e-08!33;CL:0000031!1.43e-08!33;CL:0000404!1.43e-08!33;CL:0000548!2.66e-08!115;CL:0000004!2.66e-08!115;CL:0000255!2.66e-08!115;CL:0002371!6.00e-08!118;CL:0000144!7.49e-07!121;CL:0000012!7.49e-07!121;CL:0000034!7.84e-07!97|ontology_enrichment_celltype_v019_2=CL:0000221,2.40e-12,44;CL:0000133,2.40e-12,44;CL:0002319,5.78e-12,43;CL:0002321,2.80e-10,70;CL:0000393,1.74e-09,39;CL:0000211,1.74e-09,39;CL:0000723,1.76e-09,91;CL:0000048,1.76e-09,91;CL:0000117,2.30e-09,23;CL:0000337,2.30e-09,23;CL:0000540,1.43e-08,33;CL:0000047,1.43e-08,33;CL:0000031,1.43e-08,33;CL:0000404,1.43e-08,33;CL:0000034,7.72e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.70e-13!73;UBERON:0005743!4.70e-13!73;UBERON:0000073!8.82e-13!75;UBERON:0001016!8.82e-13!75;UBERON:0004121!2.33e-11!102;UBERON:0000924!2.33e-11!102;UBERON:0006601!2.33e-11!102;UBERON:0002020!5.31e-10!34;UBERON:0001049!2.44e-09!52;UBERON:0005068!2.44e-09!52;UBERON:0006241!2.44e-09!52;UBERON:0007135!2.44e-09!52;UBERON:0002346!2.19e-08!71;UBERON:0003075!2.19e-08!71;UBERON:0007284!2.19e-08!71;UBERON:0000955!1.27e-07!50;UBERON:0006238!1.27e-07!50;UBERON:0002791!1.90e-07!29;UBERON:0003528!1.90e-07!29;UBERON:0001893!1.90e-07!29;UBERON:0002616!2.54e-07!49;UBERON:0002780!2.59e-07!39;UBERON:0001890!2.59e-07!39;UBERON:0006240!2.59e-07!39;UBERON:0003080!6.19e-07!40;UBERON:0000033!6.56e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.69e-13,73;UBERON:0001016,8.81e-13,75;UBERON:0004121,5.19e-11,95;UBERON:0000924,5.19e-11,95;UBERON:0006601,5.19e-11,95;UBERON:0002020,5.30e-10,34;UBERON:0000073,1.38e-09,54;UBERON:0001049,2.44e-09,52;UBERON:0005068,2.44e-09,52;UBERON:0006241,2.44e-09,52;UBERON:0007135,2.44e-09,52;UBERON:0002346,3.67e-08,64;UBERON:0003075,3.67e-08,64;UBERON:0007284,3.67e-08,64;UBERON:0010371,4.74e-08,73;UBERON:0003528,1.90e-07,29;UBERON:0002791,1.90e-07,29;UBERON:0001893,1.90e-07,29;UBERON:0000955,1.92e-07,47;UBERON:0006238,1.92e-07,47;UBERON:0002780,2.58e-07,39;UBERON:0001890,2.58e-07,39;UBERON:0006240,2.58e-07,39;UBERON:0002616,3.82e-07,46;UBERON:0003080,6.19e-07,40|phase1_expression=4.16387002472464,1.74487703819681,1.36499771816861,0.30246421130683,0.500895729946347,3.3575854382378,3.73780224952841,2.84071311571468,7.88416844049334,7.2560003159818,4.28044920563762,5.42450681168288,2.73921167889929,3.67165690159789,2.99798785634096,2.22722794128809,0.699561878128147,5.52058789376916,4.79900517620086,2.54633791078818,2.63634199468316,2.48227378002213,2.87319768052829,1.11994695955385,1.83527424853736,1.72269589234506,2.58457197695445,1.72376986148711,1.52018735565099,3.2763916868791,1.10865255327652,10.1604907753541,12.3012957516914,0,6.35473563452804,3.98963148860382,4.28755648150975,1.67412652294763,3.1253413780952,3.66466620781659,2.94115744015507,2.04913645487534,4.36959317728038,3.77690453926732,5.06884656097573,4.03802854755699,46.1610893165343,4.36050312760893,5.93152693383074,7.77719596297134,16.6583841734181,4.31257693094915,1.51004345451963,2.90144856804538,2.35265659399725,3.08711323243136,5.73066879877513,4.12537673821954,6.47412674750713,4.7609188134483,6.33831403506179,11.1818695582814,10.6715375533337,9.44894703145469,11.8663963508037,7.8152812644071,9.28760342607055,12.2949857702897,4.56234294157302,7.69533848490637,4.6271491497304,7.7125765789027,7.50953039235486,4.65465037016825,3.45043695665651,5.51531271966013,2.20231761998777,5.10749352340751,5.06901559745603,6.19865552331911,6.49562269577109,4.16730696445408,5.02529398202486,7.31591393041184,7.33431589328689,6.77645746589436,7.54569908235246,5.96478226640962,3.3319525066601,2.94729084416464,5.2175607966302,2.58127163094416,1.3599426674155,3.77792234146472,3.89865850468601,1.34408066129201,4.0728881838208,5.28333999991979,5.71529210126311,7.0667914902068,5.0703631119605,8.98285341900225,12.7402619853323,0,3.46385665617943,2.78695852022608,4.54972000513305,2.2836775943812,4.14300613835475,3.85949561568544,3.99016251562112,0.913396434936424,4.38169444786511,4.52167921657868,2.82212897125692,4.90099706185734,2.96633961281249,2.60278842455841,2.65383165584962,3.72063754879041,2.42925670306433,4.84875253135222,1.86391761218122,3.80615036115011,3.97948742945565,2.55457055208591,1.67741174308288,3.59941638596045,1.65191295194984,2.54644086988199,3.20250421973039,5.6544458450789,3.99795936442236,3.3243009452943,3.74018480207208,3.56930778749067,2.34230536855727,3.23458123586242,3.79084137650512,4.8401626853889,2.86264974517948,4.36813998423599,3.42118046630164,2.86339153887859,2.99360596265843,3.45907044769094,4.59138450342671,2.32833033665114,1.5089759505299,2.64748512234947,3.34307135911503,3.94552318369635,3.05851974148158,2.43776516565517,5.35033554660653,4.57778813682534,2.80885274925294,3.08817488537658,1.98914449576915,2.48550927042602,1.17263029990548,3.42117916775928,2.13070262026689,3.34499193970586,2.62254091908543,2.32533944750408,2.68273401399619,1.86824547787471,3.45575684818309,2.29834449710733,2.35099547682982,2.77779976108131,3.29325172936576,2.14730270016595,4.20579897128254,5.24813523134351,0.660837565967596,1.05780226665418,2.98603550749328,2.78684006232526,2.70621668776396,4.03367049246685,2.89091456998331,1.90225626112559,1.89811624617805,1.4822905925161,3.51869292320377,2.58643413653496,2.53453313254856,0,0.864552199498777,1.99141273254367,3.60369011810855,3.19895835307241,5.63538678365402,3.05476991767971,2.13347735884388,3.36651935473529,3.85742876457969,2.65698266363284,2.82597710114475,3.94870924549762,1.48226313543574,2.00214126859313,3.53806191203765,2.47348323623339,1.82574109249653,1.20588579876208,1.52775511068852,0.863088412352432,1.45921704097532,3.56929837144506,2.87536413054709,1.86070473834252,2.49630138491648,3.28352541331245,1.25578189465339,2.8946611281802,4.0645701836653,4.16881105895066,2.44447464663039,2.03694102930226,2.11221223459652,2.68010011906905,2.38043640886014,3.90267295715598,2.99506773801763,1.55025282754142,5.10255259703959,4.26044618260919,2.93564469172023,3.90552458170081,1.50791283939272,7.07077388964322,2.95058563811422,3.58717770196152,2.24770825982909,2.81308047821288,2.13115428989678,1.76729649043061,2.83957397474631,2.73307121007647,2.36965737506079,3.34556317133573,3.56477878531831,3.11384183867716,5.66734982344852,5.26060544240361,4.74345333535828,4.81981974632711,2.55492153374884,4.80777129901589,4.72372182125371,5.27904393512113,3.98235415019888,2.42780636154981,2.41858845571801,1.50884063804718,3.2483208216885,2.45948118355142,3.87642439752332,4.36240475373007,2.49548164869305,4.10847785316561,2.10837217149998,2.06271086496374,5.7874732978144,1.8006109403131,3.88076051348264,3.85806663056866,2.6601035046341,4.8159580752559,4.77192159746151,2.74018454203139,4.4587624532105,3.38931313382112,4.6310963591542,3.2977250588296,2.42196640043858,3.67908842061751,3.10368094408155,3.11867709515616,0.874442509889552,3.33765543618917,2.73393409276564,4.33412422722767,2.59272338317596,2.44878994106098,2.05041341581538,3.43167259809784,1.69978429993855,1.11961161858926,2.07299960706636,4.77335309007557,3.32152793260192,3.45643094115643,2.48412283890143,5.22720740036172,1.74690050996942,4.72025212346872,2.89287095038676,4.71160695571253,1.68499465279331,0.621339313086926,1.12738587736838,3.58839710505549,3.80554528051325,3.50012139019286,3.61647505737647,4.22390313726945,3.40335992072686,4.03633593016245,3.14578033277133,2.65742532908607,3.16833006883652,1.26404448251271,4.66267995167378,3.28675062927447,2.46849563657811,3.04345382634718,2.18549490259391,3.846254384639,3.2491695978407,2.42319479875554,2.28620419965,2.31900225814733,1.65678397257579,2.79014340756955,1.98690733708667,2.26730383615211,1.33191572024439,1.52513556236109,1.84673078000486,5.60249822693352,3.56596703357246,3.6630324853453,3.42989406526505,7.02200945649509,3.3885110557024,6.44455331110048,5.15605962095457,5.15559547031063,2.74033007908257,2.2661816921691,6.75022500231806,2.70192721934532,5.43770890781046,3.10656187051092,1.86817225651518,2.39414924040619,3.41467211508268,3.64660075602441,3.14419743941973,2.38996560985018,2.889207461421,3.09052585858341,2.56735367673452,2.52697211763797,3.29523089857312,2.45214243801899,4.40115085108447,3.58540853467268,4.07791829584854,4.76293691283074,2.66533949673168,4.62982129112892,4.12085900803307,2.06078488188156,1.71434626192708,3.01708870470874,1.66905332963125,2.47088908274958,3.48204707536723,3.38458431566706,2.74391959309159,2.63069711437843,2.71608227691724,2.80571135828869,3.44041552560105,4.23569274214923,2.86461730218783,5.57772628269478,2.70069255373598,4.24677982494508,1.87145286756327,3.86767897286937,3.06061331310149,2.42650561031467,3.47801753430632|short_description=p1@2310046O06Rik}} | ||
|EntrezGene=78323 | |||
|HGNC= | |||
|MCL_coexpression_id=286 | |||
|UniProt=Q14DQ1 | |||
|association_with_transcript=55bp_to_ENSMUST00000093833,ENSMUST00000114200,NM_001166364,NM_175273,uc009pva.2,uc009pvb.2_5end | |||
|description=CAGE_peak_1_at_2310046O06Rik_5end | |||
|id=chr9:57385390..57385441,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.97e-12!50;CL:0000221!2.40e-12!44;CL:0000133!2.40e-12!44;CL:0002319!5.78e-12!43;CL:0002321!2.98e-10!70;CL:0000220!2.98e-10!70;CL:0000393!1.74e-09!39;CL:0000211!1.74e-09!39;CL:0000723!1.80e-09!91;CL:0000048!1.80e-09!91;CL:0000117!2.30e-09!23;CL:0000337!2.30e-09!23;CL:0000540!1.43e-08!33;CL:0000047!1.43e-08!33;CL:0000031!1.43e-08!33;CL:0000404!1.43e-08!33;CL:0000548!2.66e-08!115;CL:0000004!2.66e-08!115;CL:0000255!2.66e-08!115;CL:0002371!6.00e-08!118;CL:0000144!7.49e-07!121;CL:0000012!7.49e-07!121;CL:0000034!7.84e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.40e-12,44;CL:0000133,2.40e-12,44;CL:0002319,5.78e-12,43;CL:0002321,2.80e-10,70;CL:0000393,1.74e-09,39;CL:0000211,1.74e-09,39;CL:0000723,1.76e-09,91;CL:0000048,1.76e-09,91;CL:0000117,2.30e-09,23;CL:0000337,2.30e-09,23;CL:0000540,1.43e-08,33;CL:0000047,1.43e-08,33;CL:0000031,1.43e-08,33;CL:0000404,1.43e-08,33;CL:0000034,7.72e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.70e-13!73;UBERON:0005743!4.70e-13!73;UBERON:0000073!8.82e-13!75;UBERON:0001016!8.82e-13!75;UBERON:0004121!2.33e-11!102;UBERON:0000924!2.33e-11!102;UBERON:0006601!2.33e-11!102;UBERON:0002020!5.31e-10!34;UBERON:0001049!2.44e-09!52;UBERON:0005068!2.44e-09!52;UBERON:0006241!2.44e-09!52;UBERON:0007135!2.44e-09!52;UBERON:0002346!2.19e-08!71;UBERON:0003075!2.19e-08!71;UBERON:0007284!2.19e-08!71;UBERON:0000955!1.27e-07!50;UBERON:0006238!1.27e-07!50;UBERON:0002791!1.90e-07!29;UBERON:0003528!1.90e-07!29;UBERON:0001893!1.90e-07!29;UBERON:0002616!2.54e-07!49;UBERON:0002780!2.59e-07!39;UBERON:0001890!2.59e-07!39;UBERON:0006240!2.59e-07!39;UBERON:0003080!6.19e-07!40;UBERON:0000033!6.56e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.69e-13,73;UBERON:0001016,8.81e-13,75;UBERON:0004121,5.19e-11,95;UBERON:0000924,5.19e-11,95;UBERON:0006601,5.19e-11,95;UBERON:0002020,5.30e-10,34;UBERON:0000073,1.38e-09,54;UBERON:0001049,2.44e-09,52;UBERON:0005068,2.44e-09,52;UBERON:0006241,2.44e-09,52;UBERON:0007135,2.44e-09,52;UBERON:0002346,3.67e-08,64;UBERON:0003075,3.67e-08,64;UBERON:0007284,3.67e-08,64;UBERON:0010371,4.74e-08,73;UBERON:0003528,1.90e-07,29;UBERON:0002791,1.90e-07,29;UBERON:0001893,1.90e-07,29;UBERON:0000955,1.92e-07,47;UBERON:0006238,1.92e-07,47;UBERON:0002780,2.58e-07,39;UBERON:0001890,2.58e-07,39;UBERON:0006240,2.58e-07,39;UBERON:0002616,3.82e-07,46;UBERON:0003080,6.19e-07,40 | |||
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| |||
|short_description=p1@2310046O06Rik | |||
}} |
Revision as of 18:19, 14 September 2013
Short description: | p1@2310046O06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2310046O06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | 55bp_to_ENSMUST00000093833, ENSMUST00000114200, NM_001166364, NM_175273, uc009pva.2, uc009pvb.2_5end |
EntrezGene: | 2310046O06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.40e-12 | 44 |
neurectodermal cell | 2.40e-12 | 44 |
neural cell | 5.78e-12 | 43 |
embryonic cell | 2.80e-10 | 70 |
electrically responsive cell | 1.74e-09 | 39 |
electrically active cell | 1.74e-09 | 39 |
somatic stem cell | 1.76e-09 | 91 |
multi fate stem cell | 1.76e-09 | 91 |
CNS neuron (sensu Vertebrata) | 2.30e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-09 | 23 |
neuron | 1.43e-08 | 33 |
neuronal stem cell | 1.43e-08 | 33 |
neuroblast | 1.43e-08 | 33 |
electrically signaling cell | 1.43e-08 | 33 |
stem cell | 7.72e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.69e-13 | 73 |
nervous system | 8.81e-13 | 75 |
ectoderm-derived structure | 5.19e-11 | 95 |
ectoderm | 5.19e-11 | 95 |
presumptive ectoderm | 5.19e-11 | 95 |
gray matter | 5.30e-10 | 34 |
regional part of nervous system | 1.38e-09 | 54 |
neural tube | 2.44e-09 | 52 |
neural rod | 2.44e-09 | 52 |
future spinal cord | 2.44e-09 | 52 |
neural keel | 2.44e-09 | 52 |
neurectoderm | 3.67e-08 | 64 |
neural plate | 3.67e-08 | 64 |
presumptive neural plate | 3.67e-08 | 64 |
ecto-epithelium | 4.74e-08 | 73 |
brain grey matter | 1.90e-07 | 29 |
regional part of telencephalon | 1.90e-07 | 29 |
telencephalon | 1.90e-07 | 29 |
brain | 1.92e-07 | 47 |
future brain | 1.92e-07 | 47 |
regional part of forebrain | 2.58e-07 | 39 |
forebrain | 2.58e-07 | 39 |
future forebrain | 2.58e-07 | 39 |
regional part of brain | 3.82e-07 | 46 |
anterior neural tube | 6.19e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.