FFCP PHASE1:Mm9::chrX:132619925..132619942,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=245610|HGNC=|MCL_coexpression_id=70|UniProt=Q4ZGD9|association_with_transcript=-131bp_to_ENSMUST00000080929,NM_001024141,uc009uib.1_5end|description=CAGE_peak_2_at_Nxf3_5end|id=chrX:132619925..132619942,-|ontology_enrichment_celltype=CL:0002614!8.39e-10!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!3.41e-22!15;UBERON:0003101!8.78e-21!16;UBERON:0000079!8.78e-21!16;UBERON:0000473!1.39e-17!14;UBERON:0004176!1.92e-14!17;UBERON:0009196!1.92e-14!17;UBERON:0009117!1.92e-14!17;UBERON:0003133!1.04e-13!24;UBERON:0000991!1.26e-13!18;UBERON:0005564!1.26e-13!18;UBERON:0005156!1.28e-12!26;UBERON:0000990!1.28e-12!26;UBERON:0002298!1.88e-10!6;UBERON:0001301!3.67e-10!3;UBERON:0006555!3.67e-10!3;UBERON:0005103!3.67e-10!3;UBERON:0000083!3.67e-10!3;UBERON:0009201!3.67e-10!3;UBERON:0004819!3.67e-10!3;UBERON:0006553!3.67e-10!3;UBERON:0003074!3.67e-10!3;UBERON:0003060!3.67e-10!3;UBERON:0002038!8.39e-10!3;UBERON:0002308!8.39e-10!3;UBERON:0009663!8.39e-10!3;UBERON:0009661!8.39e-10!3;UBERON:0006331!8.39e-10!3;UBERON:0000125!8.39e-10!3;UBERON:0003886!1.82e-08!38;UBERON:0002553!3.10e-08!39;UBERON:0000080!7.72e-08!4;UBERON:0005904!7.72e-08!4;UBERON:0006947!7.72e-08!4;UBERON:0002120!7.72e-08!4;UBERON:0004054!7.72e-08!4;UBERON:0004875!7.72e-08!4;UBERON:0004876!7.72e-08!4;UBERON:0005721!7.72e-08!4;UBERON:0005754!7.72e-08!4;UBERON:0007297!7.72e-08!4;UBERON:0002950!1.43e-07!4;UBERON:0001891!1.43e-07!4;UBERON:0009616!1.43e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.01e-24,15;UBERON:0003101,3.24e-23,16;UBERON:0000079,3.24e-23,16;UBERON:0000473,2.74e-17,14;UBERON:0003133,1.15e-15,24;UBERON:0005156,1.68e-14,26;UBERON:0000990,1.68e-14,26;UBERON:0004176,2.38e-14,17;UBERON:0009196,2.38e-14,17;UBERON:0009117,2.38e-14,17;UBERON:0000991,1.38e-13,18;UBERON:0005564,1.38e-13,18;UBERON:0003886,4.59e-10,38;UBERON:0002553,8.12e-10,39;UBERON:0002323,7.14e-07,37;UBERON:0004458,7.14e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.870848794270651,14.9106427475868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89170114157866,0,0,0,0,0,0,0.13020438484395,23.6982118402107,17.3940566994724,15.8416503441826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Nxf3}} | ||
|EntrezGene=245610 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|UniProt=Q4ZGD9 | |||
|association_with_transcript=-131bp_to_ENSMUST00000080929,NM_001024141,uc009uib.1_5end | |||
|description=CAGE_peak_2_at_Nxf3_5end | |||
|id=chrX:132619925..132619942,- | |||
|ontology_enrichment_celltype=CL:0002614!8.39e-10!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.41e-22!15;UBERON:0003101!8.78e-21!16;UBERON:0000079!8.78e-21!16;UBERON:0000473!1.39e-17!14;UBERON:0004176!1.92e-14!17;UBERON:0009196!1.92e-14!17;UBERON:0009117!1.92e-14!17;UBERON:0003133!1.04e-13!24;UBERON:0000991!1.26e-13!18;UBERON:0005564!1.26e-13!18;UBERON:0005156!1.28e-12!26;UBERON:0000990!1.28e-12!26;UBERON:0002298!1.88e-10!6;UBERON:0001301!3.67e-10!3;UBERON:0006555!3.67e-10!3;UBERON:0005103!3.67e-10!3;UBERON:0000083!3.67e-10!3;UBERON:0009201!3.67e-10!3;UBERON:0004819!3.67e-10!3;UBERON:0006553!3.67e-10!3;UBERON:0003074!3.67e-10!3;UBERON:0003060!3.67e-10!3;UBERON:0002038!8.39e-10!3;UBERON:0002308!8.39e-10!3;UBERON:0009663!8.39e-10!3;UBERON:0009661!8.39e-10!3;UBERON:0006331!8.39e-10!3;UBERON:0000125!8.39e-10!3;UBERON:0003886!1.82e-08!38;UBERON:0002553!3.10e-08!39;UBERON:0000080!7.72e-08!4;UBERON:0005904!7.72e-08!4;UBERON:0006947!7.72e-08!4;UBERON:0002120!7.72e-08!4;UBERON:0004054!7.72e-08!4;UBERON:0004875!7.72e-08!4;UBERON:0004876!7.72e-08!4;UBERON:0005721!7.72e-08!4;UBERON:0005754!7.72e-08!4;UBERON:0007297!7.72e-08!4;UBERON:0002950!1.43e-07!4;UBERON:0001891!1.43e-07!4;UBERON:0009616!1.43e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.01e-24,15;UBERON:0003101,3.24e-23,16;UBERON:0000079,3.24e-23,16;UBERON:0000473,2.74e-17,14;UBERON:0003133,1.15e-15,24;UBERON:0005156,1.68e-14,26;UBERON:0000990,1.68e-14,26;UBERON:0004176,2.38e-14,17;UBERON:0009196,2.38e-14,17;UBERON:0009117,2.38e-14,17;UBERON:0000991,1.38e-13,18;UBERON:0005564,1.38e-13,18;UBERON:0003886,4.59e-10,38;UBERON:0002553,8.12e-10,39;UBERON:0002323,7.14e-07,37;UBERON:0004458,7.14e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.870848794270651,14.9106427475868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89170114157866,0,0,0,0,0,0,0.13020438484395,23.6982118402107,17.3940566994724,15.8416503441826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Nxf3 | |||
}} |
Revision as of 19:19, 14 September 2013
Short description: | p2@Nxf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nxf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | -131bp_to_ENSMUST00000080929, NM_001024141, uc009uib.1_5end |
EntrezGene: | Nxf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.01e-24 | 15 |
male organism | 3.24e-23 | 16 |
male reproductive system | 3.24e-23 | 16 |
testis | 2.74e-17 | 14 |
reproductive organ | 1.15e-15 | 24 |
reproductive structure | 1.68e-14 | 26 |
reproductive system | 1.68e-14 | 26 |
external genitalia | 2.38e-14 | 17 |
indifferent external genitalia | 2.38e-14 | 17 |
indifferent gonad | 2.38e-14 | 17 |
gonad | 1.38e-13 | 18 |
gonad primordium | 1.38e-13 | 18 |
body cavity precursor | 4.59e-10 | 38 |
anatomical cavity | 8.12e-10 | 39 |
body cavity | 7.14e-07 | 37 |
body cavity or lining | 7.14e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.