FFCP PHASE1:Mm9::chr7:26472384..26472396,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21803|HGNC=|MCL_coexpression_id=7|UniProt=P04202,Q3UNK5|association_with_transcript=363bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end|description=CAGE_peak_5_at_Tgfb1_5end|id=chr7:26472384..26472396,+|ontology_enrichment_celltype=CL:0000988!8.55e-12!32;CL:0002032!8.55e-12!32;CL:0000037!8.55e-12!32;CL:0000566!8.55e-12!32;CL:0000837!8.55e-12!32;CL:0000738!7.14e-10!17;CL:0002087!7.14e-10!17;CL:0002031!3.23e-08!25;CL:0002320!4.46e-08!46;CL:0000134!4.46e-08!46;CL:0000838!5.49e-08!12;CL:0000542!6.52e-08!13;CL:0000051!6.52e-08!13;CL:0000084!2.63e-07!11;CL:0000827!2.63e-07!11;CL:0000791!4.29e-07!9;CL:0000789!4.29e-07!9;CL:0002420!4.29e-07!9;CL:0002419!4.29e-07!9;CL:0000790!4.29e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-24,32;CL:0002032,1.30e-24,32;CL:0000037,1.30e-24,32;CL:0000837,1.30e-24,32;CL:0000624,6.81e-24,8;CL:0000738,1.47e-21,17;CL:0002087,1.47e-21,17;CL:0002320,1.88e-21,46;CL:0000134,1.88e-21,46;CL:0000791,3.75e-21,9;CL:0000789,3.75e-21,9;CL:0002420,3.75e-21,9;CL:0002419,3.75e-21,9;CL:0000790,3.75e-21,9;CL:0000838,2.80e-20,12;CL:0000542,1.23e-18,13;CL:0000051,1.23e-18,13;CL:0000219,7.86e-18,54;CL:0000084,3.66e-17,11;CL:0000827,3.66e-17,11;CL:0002031,4.41e-17,25;CL:0000893,6.63e-17,6;CL:0002489,6.63e-17,6;CL:0000898,6.63e-17,6;CL:0000809,6.63e-17,6;CL:0000810,6.63e-17,6;CL:0000895,6.63e-17,6;CL:0000808,6.63e-17,6;CL:0000894,6.63e-17,6;CL:0000806,6.63e-17,6;CL:0000807,6.63e-17,6;CL:0000805,6.63e-17,6;CL:0002425,6.63e-17,6;CL:0002436,6.63e-17,6;CL:0002427,6.63e-17,6;CL:0002428,6.63e-17,6;CL:0002429,6.63e-17,6;CL:0002433,6.63e-17,6;CL:0002431,6.63e-17,6;CL:0002432,6.63e-17,6;CL:0000034,6.31e-13,97;CL:0000723,2.44e-09,91;CL:0000048,2.44e-09,91;CL:0000049,6.60e-09,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.97e-08!48;UBERON:0002384!4.46e-08!46;UBERON:0003081!9.28e-08!88;UBERON:0002390!1.07e-07!45;UBERON:0003061!1.07e-07!45;UBERON:0002405!8.06e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.88e-21,46;UBERON:0002390,2.51e-10,45;UBERON:0003061,2.51e-10,45;UBERON:0002193,1.50e-09,48;UBERON:0002405,1.50e-09,48;UBERON:0002371,5.07e-08,16;UBERON:0001474,1.25e-07,22;UBERON:0004765,1.25e-07,22;UBERON:0001434,1.25e-07,22|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,36.745856481585,33.2371627377231,4.45166717386313,4.62678522172951,1.02720437958723,0.262261207256992,0.999329285446988,0.202475267389826,0,0,0.274228867211478,1.27316895539409,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0.139986421625363,0,1.51004345451963,1.45072428402269,0.672187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,1.97773272513395,3.5524005747305,0.299600110518405,1.15265491596466,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0.70667914902068,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0,1.45462575940567,0,0,0,0.255457055208591,2.75574786363617,1.19980546198682,3.43089613097275,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.995255764880744,0.505445516867349,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.823128545631774,0.398068533636986,1.40442637462647,0.772043721344145,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0,0.405344047729279,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0.610953983535943,0.581857461502877,0.350679099451593,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.449724224769707,0.811440485554012,0.241177159752417,0.25462585178142,0,0.162135226775035,0,4.31304619582064,0.744281895337007,0,0,0.358794827043824,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0.472905432318573,0.44292937929755,0,0.327726629431476,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0.938686832254841,0,0,0.16488625294148,0,0.180938774784468,0.238744688006273,0,0.291480836629851,0,0.68348352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| ||
|EntrezGene=21803 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=P04202,Q3UNK5 | |||
|association_with_transcript=363bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end | |||
|description=CAGE_peak_5_at_Tgfb1_5end | |||
|id=chr7:26472384..26472396,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.55e-12!32;CL:0002032!8.55e-12!32;CL:0000037!8.55e-12!32;CL:0000566!8.55e-12!32;CL:0000837!8.55e-12!32;CL:0000738!7.14e-10!17;CL:0002087!7.14e-10!17;CL:0002031!3.23e-08!25;CL:0002320!4.46e-08!46;CL:0000134!4.46e-08!46;CL:0000838!5.49e-08!12;CL:0000542!6.52e-08!13;CL:0000051!6.52e-08!13;CL:0000084!2.63e-07!11;CL:0000827!2.63e-07!11;CL:0000791!4.29e-07!9;CL:0000789!4.29e-07!9;CL:0002420!4.29e-07!9;CL:0002419!4.29e-07!9;CL:0000790!4.29e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-24,32;CL:0002032,1.30e-24,32;CL:0000037,1.30e-24,32;CL:0000837,1.30e-24,32;CL:0000624,6.81e-24,8;CL:0000738,1.47e-21,17;CL:0002087,1.47e-21,17;CL:0002320,1.88e-21,46;CL:0000134,1.88e-21,46;CL:0000791,3.75e-21,9;CL:0000789,3.75e-21,9;CL:0002420,3.75e-21,9;CL:0002419,3.75e-21,9;CL:0000790,3.75e-21,9;CL:0000838,2.80e-20,12;CL:0000542,1.23e-18,13;CL:0000051,1.23e-18,13;CL:0000219,7.86e-18,54;CL:0000084,3.66e-17,11;CL:0000827,3.66e-17,11;CL:0002031,4.41e-17,25;CL:0000893,6.63e-17,6;CL:0002489,6.63e-17,6;CL:0000898,6.63e-17,6;CL:0000809,6.63e-17,6;CL:0000810,6.63e-17,6;CL:0000895,6.63e-17,6;CL:0000808,6.63e-17,6;CL:0000894,6.63e-17,6;CL:0000806,6.63e-17,6;CL:0000807,6.63e-17,6;CL:0000805,6.63e-17,6;CL:0002425,6.63e-17,6;CL:0002436,6.63e-17,6;CL:0002427,6.63e-17,6;CL:0002428,6.63e-17,6;CL:0002429,6.63e-17,6;CL:0002433,6.63e-17,6;CL:0002431,6.63e-17,6;CL:0002432,6.63e-17,6;CL:0000034,6.31e-13,97;CL:0000723,2.44e-09,91;CL:0000048,2.44e-09,91;CL:0000049,6.60e-09,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.97e-08!48;UBERON:0002384!4.46e-08!46;UBERON:0003081!9.28e-08!88;UBERON:0002390!1.07e-07!45;UBERON:0003061!1.07e-07!45;UBERON:0002405!8.06e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.88e-21,46;UBERON:0002390,2.51e-10,45;UBERON:0003061,2.51e-10,45;UBERON:0002193,1.50e-09,48;UBERON:0002405,1.50e-09,48;UBERON:0002371,5.07e-08,16;UBERON:0001474,1.25e-07,22;UBERON:0004765,1.25e-07,22;UBERON:0001434,1.25e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,36.745856481585,33.2371627377231,4.45166717386313,4.62678522172951,1.02720437958723,0.262261207256992,0.999329285446988,0.202475267389826,0,0,0.274228867211478,1.27316895539409,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0.139986421625363,0,1.51004345451963,1.45072428402269,0.672187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,1.97773272513395,3.5524005747305,0.299600110518405,1.15265491596466,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0.70667914902068,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0,1.45462575940567,0,0,0,0.255457055208591,2.75574786363617,1.19980546198682,3.43089613097275,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.995255764880744,0.505445516867349,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.823128545631774,0.398068533636986,1.40442637462647,0.772043721344145,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0,0.405344047729279,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0.610953983535943,0.581857461502877,0.350679099451593,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.449724224769707,0.811440485554012,0.241177159752417,0.25462585178142,0,0.162135226775035,0,4.31304619582064,0.744281895337007,0,0,0.358794827043824,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0.472905432318573,0.44292937929755,0,0.327726629431476,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0.938686832254841,0,0,0.16488625294148,0,0.180938774784468,0.238744688006273,0,0.291480836629851,0,0.683483523191411,0.619160603889667,0,0.188368457004691,1.0935538217682,0.228778173206523,7.64902934972349,8.39708713941948,5.66619892598138,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0.104859344425711,0.966336483304024,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.15241361331,0.302478555410522,0.194915761479505,0.192423683280659,0.116876902181569,0.453460767230423,0,0.0897138566094757,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.543216455383447,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.578719832943424,0.749431733813838,0.233931608445408,0.214871054048298,0.956441660344217,0.661774257358546,0 | |||
|short_description=p5@Tgfb1 | |||
}} |
Revision as of 12:55, 14 September 2013
Short description: | p5@Tgfb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tgfb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 363bp_to_ENSMUST00000002678, NM_011577, uc009ftq.1_5end |
EntrezGene: | Tgfb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.88e-21 | 46 |
hematopoietic system | 2.51e-10 | 45 |
blood island | 2.51e-10 | 45 |
hemolymphoid system | 1.50e-09 | 48 |
immune system | 1.50e-09 | 48 |
bone marrow | 5.07e-08 | 16 |
bone element | 1.25e-07 | 22 |
skeletal element | 1.25e-07 | 22 |
skeletal system | 1.25e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.