FFCP PHASE1:Mm9::chr2:127347042..127347058,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56461|HGNC=|MCL_coexpression_id=1|UniProt=Q9QXT8,Q3YAB0|association_with_transcript=47bp_to_ENSMUST00000103215,NM_019789,uc008mfm.1_5end|description=CAGE_peak_3_at_Kcnip3_5end|id=chr2:127347042..127347058,-|ontology_enrichment_celltype=CL:0000540!4.64e-15!33;CL:0000047!4.64e-15!33;CL:0000031!4.64e-15!33;CL:0000404!4.64e-15!33;CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0002319!2.45e-12!43;CL:0000221!9.47e-12!44;CL:0000133!9.47e-12!44;CL:0000393!7.99e-11!39;CL:0000211!7.99e-11!39;CL:0000055!8.40e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.08e-18,33;CL:0000047,2.08e-18,33;CL:0000031,2.08e-18,33;CL:0000404,2.08e-18,33;CL:0000117,2.09e-16,23;CL:0000337,2.09e-16,23;CL:0002319,3.37e-15,43;CL:0000221,1.09e-14,44;CL:0000133,1.09e-14,44;CL:0000393,1.57e-14,39;CL:0000211,1.57e-14,39;CL:0002321,9.76e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.59e-33!73;UBERON:0005743!1.59e-33!73;UBERON:0000073!7.66e-32!75;UBERON:0001016!7.66e-32!75;UBERON:0001049!1.02e-26!52;UBERON:0005068!1.02e-26!52;UBERON:0006241!1.02e-26!52;UBERON:0007135!1.02e-26!52;UBERON:0004121!3.15e-26!102;UBERON:0000924!3.15e-26!102;UBERON:0006601!3.15e-26!102;UBERON:0000955!2.10e-25!50;UBERON:0006238!2.10e-25!50;UBERON:0002616!1.33e-24!49;UBERON:0002346!1.71e-24!71;UBERON:0003075!1.71e-24!71;UBERON:0007284!1.71e-24!71;UBERON:0000033!1.34e-23!63;UBERON:0002020!1.52e-20!34;UBERON:0003080!1.89e-19!40;UBERON:0003056!2.88e-19!49;UBERON:0002780!1.23e-18!39;UBERON:0001890!1.23e-18!39;UBERON:0006240!1.23e-18!39;UBERON:0002791!2.27e-17!29;UBERON:0003528!2.27e-17!29;UBERON:0001893!2.27e-17!29;UBERON:0000956!4.91e-13!21;UBERON:0001869!4.91e-13!21;UBERON:0000203!4.91e-13!21;UBERON:0007811!7.51e-13!86;UBERON:0002619!1.67e-10!17;UBERON:0000153!4.80e-10!94;UBERON:0002021!4.03e-09!10;UBERON:0000411!4.03e-09!10;UBERON:0001950!4.03e-09!10;UBERON:0003076!8.95e-08!12;UBERON:0003057!8.95e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.79e-46,73;UBERON:0001016,7.40e-45,75;UBERON:0004121,8.19e-39,95;UBERON:0000924,8.19e-39,95;UBERON:0006601,8.19e-39,95;UBERON:0000073,4.75e-37,54;UBERON:0001049,7.83e-35,52;UBERON:0005068,7.83e-35,52;UBERON:0006241,7.83e-35,52;UBERON:0007135,7.83e-35,52;UBERON:0002346,5.41e-31,64;UBERON:0003075,5.41e-31,64;UBERON:0007284,5.41e-31,64;UBERON:0000955,1.35e-30,47;UBERON:0006238,1.35e-30,47;UBERON:0002616,2.82e-29,46;UBERON:0002020,2.66e-28,34;UBERON:0010371,4.14e-27,73;UBERON:0003080,3.27e-25,40;UBERON:0003528,1.54e-24,29;UBERON:0002791,1.54e-24,29;UBERON:0001893,1.54e-24,29;UBERON:0002780,7.36e-24,39;UBERON:0001890,7.36e-24,39;UBERON:0006240,7.36e-24,39;UBERON:0003056,5.12e-22,49;UBERON:0000956,4.38e-18,21;UBERON:0001869,4.38e-18,21;UBERON:0000203,4.38e-18,21;UBERON:0010314,6.21e-18,92;UBERON:0002021,2.74e-15,10;UBERON:0000411,2.74e-15,10;UBERON:0001950,2.74e-15,10;UBERON:0002619,1.22e-13,17;UBERON:0000025,6.68e-10,114;UBERON:0003076,9.12e-10,12;UBERON:0003057,9.12e-10,12;UBERON:0011216,1.79e-09,194;UBERON:0004111,2.50e-09,122;UBERON:0002420,1.53e-07,8;UBERON:0007245,1.53e-07,8;UBERON:0010009,1.53e-07,8;UBERON:0010011,1.53e-07,8;UBERON:0000454,1.53e-07,8|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,1.79760066311043,2.30530983192933,1.97010263386108,2.43010688997043,2.10324961351382,6.56997264128748,6.84692476950002,0.857435594504678,0.862609239164127,1.83843757322004,3.30347642998166,7.02280359468532,6.45147439676223,1.05509030184155,0.365950574409639,1.04182674111352,6.70039197603314,5.6276261003168,5.34793867218835,4.71405736757868,4.27115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,11.7112318804619,21.7824575085993,0,0,0,0.381210681219194,13.6309481858389,8.6925114535539,3.14135880282161,19.1206752211504,21.7358138730781,11.4283424507758,15.0884374653015,0,0.248813941220186,0.252722758433675,1.26265113531884,0,0,0,0.452114453507145,0.476255494059295,0.640568601424249,0.937017245597288,3.62184719034622,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,19.1363853193356,8.43817821510132,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,1.37968373152366,24.8853414481078,20.1604100938589,0,0,0,0.390438744296638,1.50796378412959,1.67278158566786,0.668396022247182,1.13230612315533,1.61924280669958,2.04579100537918,1.18586333383957,9.3183181762324,0.567760340833074,0,0,0.824850614862677,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0.632073515871632,0,0,5.7874732978144,0,0.129358683782755,0,0.532020700926821,0.178368817602071,0.658196082408484,3.04464949114599,0,0,0.661585194164886,0,0,0,0,0,0.291480836629851,23.9198639593557,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0,5.59205381778233,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0,0,10.1655331671072,13.3494318587081,10.8850147553485,7.90524638780963,10.9613203163303,14.3524840504043,10.1253375034771,9.00642406448441,16.7662691324156,16.5683299760582,0,0,0.682934423016537,0,0,0.183843508450014,0.888986911206461,0.412070114477788,0.64183841918363,0.758091635291392,0.760437899670719,0.754505365544305,0.280924522409647,1.02440243847791,0.689225627467359,1.42888107384922,0.463537303779422,0.77163688185482,0.824171801606613,0.147198920134397,0.342869252385415,0.70990322463735,0.715308569841963,0,0.658765662907314,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.949080144993393,0.788035859004508,1.22769312950907,0.309873682371932,0.771626443924566,1.99848462350357,0.233931608445408,1.07435527024149,0.382576664137687,0,1.62307484934295|short_description=p3@Kcnip3}} | ||
|EntrezGene=56461 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9QXT8,Q3YAB0 | |||
|association_with_transcript=47bp_to_ENSMUST00000103215,NM_019789,uc008mfm.1_5end | |||
|description=CAGE_peak_3_at_Kcnip3_5end | |||
|id=chr2:127347042..127347058,- | |||
|ontology_enrichment_celltype=CL:0000540!4.64e-15!33;CL:0000047!4.64e-15!33;CL:0000031!4.64e-15!33;CL:0000404!4.64e-15!33;CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0002319!2.45e-12!43;CL:0000221!9.47e-12!44;CL:0000133!9.47e-12!44;CL:0000393!7.99e-11!39;CL:0000211!7.99e-11!39;CL:0000055!8.40e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.08e-18,33;CL:0000047,2.08e-18,33;CL:0000031,2.08e-18,33;CL:0000404,2.08e-18,33;CL:0000117,2.09e-16,23;CL:0000337,2.09e-16,23;CL:0002319,3.37e-15,43;CL:0000221,1.09e-14,44;CL:0000133,1.09e-14,44;CL:0000393,1.57e-14,39;CL:0000211,1.57e-14,39;CL:0002321,9.76e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.59e-33!73;UBERON:0005743!1.59e-33!73;UBERON:0000073!7.66e-32!75;UBERON:0001016!7.66e-32!75;UBERON:0001049!1.02e-26!52;UBERON:0005068!1.02e-26!52;UBERON:0006241!1.02e-26!52;UBERON:0007135!1.02e-26!52;UBERON:0004121!3.15e-26!102;UBERON:0000924!3.15e-26!102;UBERON:0006601!3.15e-26!102;UBERON:0000955!2.10e-25!50;UBERON:0006238!2.10e-25!50;UBERON:0002616!1.33e-24!49;UBERON:0002346!1.71e-24!71;UBERON:0003075!1.71e-24!71;UBERON:0007284!1.71e-24!71;UBERON:0000033!1.34e-23!63;UBERON:0002020!1.52e-20!34;UBERON:0003080!1.89e-19!40;UBERON:0003056!2.88e-19!49;UBERON:0002780!1.23e-18!39;UBERON:0001890!1.23e-18!39;UBERON:0006240!1.23e-18!39;UBERON:0002791!2.27e-17!29;UBERON:0003528!2.27e-17!29;UBERON:0001893!2.27e-17!29;UBERON:0000956!4.91e-13!21;UBERON:0001869!4.91e-13!21;UBERON:0000203!4.91e-13!21;UBERON:0007811!7.51e-13!86;UBERON:0002619!1.67e-10!17;UBERON:0000153!4.80e-10!94;UBERON:0002021!4.03e-09!10;UBERON:0000411!4.03e-09!10;UBERON:0001950!4.03e-09!10;UBERON:0003076!8.95e-08!12;UBERON:0003057!8.95e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.79e-46,73;UBERON:0001016,7.40e-45,75;UBERON:0004121,8.19e-39,95;UBERON:0000924,8.19e-39,95;UBERON:0006601,8.19e-39,95;UBERON:0000073,4.75e-37,54;UBERON:0001049,7.83e-35,52;UBERON:0005068,7.83e-35,52;UBERON:0006241,7.83e-35,52;UBERON:0007135,7.83e-35,52;UBERON:0002346,5.41e-31,64;UBERON:0003075,5.41e-31,64;UBERON:0007284,5.41e-31,64;UBERON:0000955,1.35e-30,47;UBERON:0006238,1.35e-30,47;UBERON:0002616,2.82e-29,46;UBERON:0002020,2.66e-28,34;UBERON:0010371,4.14e-27,73;UBERON:0003080,3.27e-25,40;UBERON:0003528,1.54e-24,29;UBERON:0002791,1.54e-24,29;UBERON:0001893,1.54e-24,29;UBERON:0002780,7.36e-24,39;UBERON:0001890,7.36e-24,39;UBERON:0006240,7.36e-24,39;UBERON:0003056,5.12e-22,49;UBERON:0000956,4.38e-18,21;UBERON:0001869,4.38e-18,21;UBERON:0000203,4.38e-18,21;UBERON:0010314,6.21e-18,92;UBERON:0002021,2.74e-15,10;UBERON:0000411,2.74e-15,10;UBERON:0001950,2.74e-15,10;UBERON:0002619,1.22e-13,17;UBERON:0000025,6.68e-10,114;UBERON:0003076,9.12e-10,12;UBERON:0003057,9.12e-10,12;UBERON:0011216,1.79e-09,194;UBERON:0004111,2.50e-09,122;UBERON:0002420,1.53e-07,8;UBERON:0007245,1.53e-07,8;UBERON:0010009,1.53e-07,8;UBERON:0010011,1.53e-07,8;UBERON:0000454,1.53e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,1.79760066311043,2.30530983192933,1.97010263386108,2.43010688997043,2.10324961351382,6.56997264128748,6.84692476950002,0.857435594504678,0.862609239164127,1.83843757322004,3.30347642998166,7.02280359468532,6.45147439676223,1.05509030184155,0.365950574409639,1.04182674111352,6.70039197603314,5.6276261003168,5.34793867218835,4.71405736757868,4.27115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,11.7112318804619,21.7824575085993,0,0,0,0.381210681219194,13.6309481858389,8.6925114535539,3.14135880282161,19.1206752211504,21.7358138730781,11.4283424507758,15.0884374653015,0,0.248813941220186,0.252722758433675,1.26265113531884,0,0,0,0.452114453507145,0.476255494059295,0.640568601424249,0.937017245597288,3.62184719034622,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,19.1363853193356,8.43817821510132,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,1.37968373152366,24.8853414481078,20.1604100938589,0,0,0,0.390438744296638,1.50796378412959,1.67278158566786,0.668396022247182,1.13230612315533,1.61924280669958,2.04579100537918,1.18586333383957,9.3183181762324,0.567760340833074,0,0,0.824850614862677,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0.632073515871632,0,0,5.7874732978144,0,0.129358683782755,0,0.532020700926821,0.178368817602071,0.658196082408484,3.04464949114599,0,0,0.661585194164886,0,0,0,0,0,0.291480836629851,23.9198639593557,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0,5.59205381778233,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0,0,10.1655331671072,13.3494318587081,10.8850147553485,7.90524638780963,10.9613203163303,14.3524840504043,10.1253375034771,9.00642406448441,16.7662691324156,16.5683299760582,0,0,0.682934423016537,0,0,0.183843508450014,0.888986911206461,0.412070114477788,0.64183841918363,0.758091635291392,0.760437899670719,0.754505365544305,0.280924522409647,1.02440243847791,0.689225627467359,1.42888107384922,0.463537303779422,0.77163688185482,0.824171801606613,0.147198920134397,0.342869252385415,0.70990322463735,0.715308569841963,0,0.658765662907314,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.949080144993393,0.788035859004508,1.22769312950907,0.309873682371932,0.771626443924566,1.99848462350357,0.233931608445408,1.07435527024149,0.382576664137687,0,1.62307484934295 | |||
|short_description=p3@Kcnip3 | |||
}} |
Revision as of 22:00, 13 September 2013
Short description: | p3@Kcnip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 47bp_to_ENSMUST00000103215, NM_019789, uc008mfm.1_5end |
EntrezGene: | Kcnip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.08e-18 | 33 |
neuronal stem cell | 2.08e-18 | 33 |
neuroblast | 2.08e-18 | 33 |
electrically signaling cell | 2.08e-18 | 33 |
CNS neuron (sensu Vertebrata) | 2.09e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-16 | 23 |
neural cell | 3.37e-15 | 43 |
ectodermal cell | 1.09e-14 | 44 |
neurectodermal cell | 1.09e-14 | 44 |
electrically responsive cell | 1.57e-14 | 39 |
electrically active cell | 1.57e-14 | 39 |
embryonic cell | 9.76e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.