FFCP PHASE1:Mm9::chr5:146345592..146345596,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100041375,53973|HGNC=|MCL_coexpression_id=196|UniProt=Q9JMA7|association_with_transcript=2bp_to_ENSMUST00000075837,NM_001105159,NM_017396_5end|description=CAGE_peak_1_at_Cyp3a41a_5end,CAGE_peak_1_at_Cyp3a41b_5end|id=chr5:146345592..146345596,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.83e-12!22;UBERON:0007499!2.83e-12!22;UBERON:0006925!2.83e-12!22;UBERON:0009497!2.83e-12!22;UBERON:0000015!2.83e-12!22;UBERON:0002423!2.83e-12!22;UBERON:0006235!2.83e-12!22;UBERON:0008835!2.83e-12!22;UBERON:0003894!2.83e-12!22;UBERON:0004161!2.83e-12!22;UBERON:0008836!2.83e-12!22;UBERON:0009854!1.13e-11!23;UBERON:0009856!1.13e-11!23;UBERON:0002365!1.29e-10!25;UBERON:0002330!1.29e-10!25;UBERON:0005057!2.80e-09!51;UBERON:0003929!2.01e-08!55;UBERON:0002368!1.62e-07!60;UBERON:0004921!2.43e-07!126;UBERON:0004185!2.43e-07!126;UBERON:0005911!2.53e-07!69;UBERON:0001007!3.64e-07!128;UBERON:0001555!3.64e-07!128;UBERON:0007026!3.64e-07!128;UBERON:0004119!5.39e-07!130;UBERON:0000925!5.39e-07!130;UBERON:0006595!5.39e-07!130;UBERON:0002530!9.46e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.71e-19,22;UBERON:0007499,1.71e-19,22;UBERON:0006925,1.71e-19,22;UBERON:0009497,1.71e-19,22;UBERON:0000015,1.71e-19,22;UBERON:0002423,1.71e-19,22;UBERON:0006235,1.71e-19,22;UBERON:0008835,1.71e-19,22;UBERON:0003894,1.71e-19,22;UBERON:0004161,1.71e-19,22;UBERON:0008836,1.71e-19,22;UBERON:0009854,1.22e-18,23;UBERON:0009856,1.22e-18,23;UBERON:0002365,3.91e-17,25;UBERON:0002330,3.91e-17,25;UBERON:0005256,2.11e-09,45;UBERON:0003914,5.47e-09,47;UBERON:0005172,1.31e-08,49;UBERON:0005173,1.31e-08,49;UBERON:0002417,1.31e-08,49;UBERON:0000916,1.31e-08,49;UBERON:0003929,1.25e-07,55;UBERON:0002368,5.82e-07,60;UBERON:0003104,7.69e-07,61;UBERON:0009142,7.69e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5261787272703,0,0,0,0,0,0.25462585178142,0,0,7.4131581560782,4.31304619582064,12.6527922207291,2.18426371180192,0.757736633841335,1.61457672169721,4.82443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,1.07449492442937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Cyp3a41a,p1@Cyp3a41b}} | ||
|EntrezGene=100041375,53973 | |||
|HGNC= | |||
|MCL_coexpression_id=196 | |||
|UniProt=Q9JMA7 | |||
|association_with_transcript=2bp_to_ENSMUST00000075837,NM_001105159,NM_017396_5end | |||
|description=CAGE_peak_1_at_Cyp3a41a_5end,CAGE_peak_1_at_Cyp3a41b_5end | |||
|id=chr5:146345592..146345596,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.83e-12!22;UBERON:0007499!2.83e-12!22;UBERON:0006925!2.83e-12!22;UBERON:0009497!2.83e-12!22;UBERON:0000015!2.83e-12!22;UBERON:0002423!2.83e-12!22;UBERON:0006235!2.83e-12!22;UBERON:0008835!2.83e-12!22;UBERON:0003894!2.83e-12!22;UBERON:0004161!2.83e-12!22;UBERON:0008836!2.83e-12!22;UBERON:0009854!1.13e-11!23;UBERON:0009856!1.13e-11!23;UBERON:0002365!1.29e-10!25;UBERON:0002330!1.29e-10!25;UBERON:0005057!2.80e-09!51;UBERON:0003929!2.01e-08!55;UBERON:0002368!1.62e-07!60;UBERON:0004921!2.43e-07!126;UBERON:0004185!2.43e-07!126;UBERON:0005911!2.53e-07!69;UBERON:0001007!3.64e-07!128;UBERON:0001555!3.64e-07!128;UBERON:0007026!3.64e-07!128;UBERON:0004119!5.39e-07!130;UBERON:0000925!5.39e-07!130;UBERON:0006595!5.39e-07!130;UBERON:0002530!9.46e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.71e-19,22;UBERON:0007499,1.71e-19,22;UBERON:0006925,1.71e-19,22;UBERON:0009497,1.71e-19,22;UBERON:0000015,1.71e-19,22;UBERON:0002423,1.71e-19,22;UBERON:0006235,1.71e-19,22;UBERON:0008835,1.71e-19,22;UBERON:0003894,1.71e-19,22;UBERON:0004161,1.71e-19,22;UBERON:0008836,1.71e-19,22;UBERON:0009854,1.22e-18,23;UBERON:0009856,1.22e-18,23;UBERON:0002365,3.91e-17,25;UBERON:0002330,3.91e-17,25;UBERON:0005256,2.11e-09,45;UBERON:0003914,5.47e-09,47;UBERON:0005172,1.31e-08,49;UBERON:0005173,1.31e-08,49;UBERON:0002417,1.31e-08,49;UBERON:0000916,1.31e-08,49;UBERON:0003929,1.25e-07,55;UBERON:0002368,5.82e-07,60;UBERON:0003104,7.69e-07,61;UBERON:0009142,7.69e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5261787272703,0,0,0,0,0,0.25462585178142,0,0,7.4131581560782,4.31304619582064,12.6527922207291,2.18426371180192,0.757736633841335,1.61457672169721,4.82443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,1.07449492442937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Cyp3a41a,p1@Cyp3a41b | |||
}} |
Revision as of 07:01, 14 September 2013
Short description: | p1@Cyp3a41a, p1@Cyp3a41b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp3a41a_5end, CAGE_peak_1_at_Cyp3a41b_5end |
Coexpression cluster: | MCL_coexpression_mm9:196 |
Association with transcript: | 2bp_to_ENSMUST00000075837, NM_001105159, NM_017396_5end |
EntrezGene: | 100041375,53973 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.71e-19 | 22 |
epithelial sac | 1.71e-19 | 22 |
digestive gland | 1.71e-19 | 22 |
epithelium of foregut-midgut junction | 1.71e-19 | 22 |
anatomical boundary | 1.71e-19 | 22 |
hepatobiliary system | 1.71e-19 | 22 |
foregut-midgut junction | 1.71e-19 | 22 |
hepatic diverticulum | 1.71e-19 | 22 |
liver primordium | 1.71e-19 | 22 |
septum transversum | 1.71e-19 | 22 |
liver bud | 1.71e-19 | 22 |
digestive tract diverticulum | 1.22e-18 | 23 |
sac | 1.22e-18 | 23 |
exocrine gland | 3.91e-17 | 25 |
exocrine system | 3.91e-17 | 25 |
trunk mesenchyme | 2.11e-09 | 45 |
epithelial tube | 5.47e-09 | 47 |
abdomen element | 1.31e-08 | 49 |
abdominal segment element | 1.31e-08 | 49 |
abdominal segment of trunk | 1.31e-08 | 49 |
abdomen | 1.31e-08 | 49 |
gut epithelium | 1.25e-07 | 55 |
endocrine gland | 5.82e-07 | 60 |
mesenchyme | 7.69e-07 | 61 |
entire embryonic mesenchyme | 7.69e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.