FFCP PHASE1:Mm9::chr4:118081936..118081979,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=80509|HGNC=|UniProt=Q9D7W5,A2A9C8,Q9CY05,Q9DAY7,A2A9C5,A2A9C4|association_with_transcript=0bp_to_ENSMUST00000019229,ENSMUST00000073881,ENSMUST00000084319,ENSMUST00000106384,ENSMUST00000126089,ENSMUST00000130421,NM_020000,NM_173719,uc008ujv.1,uc008ujw.1,uc008ujx.1_5end|description=CAGE_peak_1_at_Med8_5end|id=chr4:118081936..118081979,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=17.6163731815273,12.9120900826564,13.1949779422965,13.9133537201142,11.0197060588196,13.0945832091274,18.9226238882376,19.2393751927949,13.51571732656,18.4910975794375,45.2015436115333,41.6410669955656,26.8785145991993,20.4563741660454,16.9885978525988,24.2970320867791,37.7763414189199,20.6627718309646,15.9052742982657,19.9463136345074,18.9646537036886,18.5674078745655,18.0227854505865,22.8789164594572,23.3997466688513,18.3754228516806,14.6459078694085,17.0222273821852,26.2232318849796,17.8941392129551,16.4080577884925,12.065582795733,22.7573971406291,0,18.7753552838328,19.1169842162266,15.7210404322024,27.204555997899,41.4107732597614,35.0760908462445,24.1174910092716,17.7591826089196,31.0726625939938,6.79842817068117,7.50189291024408,15.6014739337429,8.60630478782843,18.7501634487184,17.1355222532888,14.7766723296455,18.3382212329225,14.3752564364972,13.5903910906766,11.6057942721815,12.4354705682712,17.7509010864803,11.4613375975503,14.9544906760458,22.659443616275,16.9277113367051,19.6487735086916,23.041428180701,20.4537803105562,22.0475430733943,14.8329954385046,14.209602298922,8.68840320503374,9.22123932771731,22.7080250955566,23.3560273313825,27.7628948983824,17.424710048632,20.5407743085001,26.2130310320002,29.3287141315803,16.5459381589804,4.40463523997555,6.2566795661742,7.21950706304344,18.3321939944969,26.9888548627108,26.045668527838,7.2587579740359,4.50210088025344,6.1119299110724,12.6690291753677,15.9456282494995,16.5895506784518,43.9211921332467,27.2057616384428,11.0148505706638,39.5794983411438,21.759082678648,30.7630819233556,27.2906095328021,17.9210754838934,22.4711072210803,18.5769051610083,22.8611684050525,21.2003744706204,19.4363919291819,5.13305909657271,20.3844191765317,14.2213340630666,17.5357743219083,19.0019899106324,24.2651733607096,20.3247305899927,17.8667139716548,10.5393918736026,24.9818870543236,16.7456013071678,25.8289356926786,25.3214036128406,23.8705075485481,19.8553214300887,26.449861547578,15.0383331196708,16.8076004870476,21.1914573431106,21.6424688091186,26.6681389224372,22.3670113461747,18.737971008739,20.1068838540917,20.6920214718959,13.4192939446631,28.1954283566902,16.9003402007176,11.0845073159569,14.640019290196,24.5025986620086,18.5992022605736,22.2472447877388,13.9217989854905,15.2506787283692,23.3212143217224,18.661045591514,15.9215337813215,25.6739064181498,23.4216797332867,27.5882525320167,25.5688224323596,27.8803912996073,22.9963367131488,21.1387638470002,22.9569225171336,16.815719098036,26.7304311236724,21.1798809787958,20.9381837755099,25.8650964264538,15.0145514581823,19.8503734917635,19.3435208223467,15.723707078661,26.6841011179029,29.3376614110775,23.017243451043,23.1980865239762,19.7001890384121,21.9675714982438,19.8865577891577,22.2343581874566,22.2144642557825,18.1376476905318,16.901224288176,23.1195377886996,21.8864600384929,23.6401148273897,18.1594133382717,15.2047986922346,20.1986106067767,18.6546922076917,17.2437757822584,22.6390147234426,20.1555457620117,23.5361004330554,23.8882840599462,26.0105072483691,22.036335886078,19.1599348392175,18.6797556829691,23.9684288901825,27.5226855695817,23.0578536613615,23.6255096272253,17.9060824837036,21.056121408865,20.6728463990471,23.9913235360911,21.3081162382173,24.8464950248537,19.4222471436539,16.9061603509621,18.7359221617689,18.0375813065892,20.0588444886311,16.8841554121767,17.4179974615931,20.8808308029028,20.1137377192535,31.1275258441506,33.3690211432188,28.107936301188,37.3271106558857,27.3861163874479,26.7706647325183,26.2264627334862,18.9879450717535,22.0503908414048,34.3201766485102,11.5014565221884,14.5134969590716,30.8917296383415,32.5826752551774,37.4940594260796,37.6305946663426,24.2026679118252,22.7389694124582,18.2520773615069,19.5206848641466,19.2446003596572,17.7556632888325,18.091316707337,25.5625078693716,22.2265553189729,19.2674279994434,21.8453033060757,23.2685906896348,25.2120073524208,25.3135852517645,33.1740824666399,38.6173035511284,26.555270743028,22.9027499432928,14.9312048688647,17.1129062424617,21.9672826804745,22.2174415939848,15.1443945319803,11.7131623288992,12.2791336707695,12.1874086955802,15.5959071857676,11.889214293131,18.6212922770451,15.1973046113882,10.6727700045561,18.9579576688866,15.0456490320765,14.4233138970477,18.7320003256613,19.6314446337317,13.2745138339963,23.0641604347232,27.2091201268276,18.6719028958339,19.1946230372502,18.4461088766356,23.0001180919717,18.1766864738753,17.8248689192361,23.3867200872504,24.2462799722497,13.4076206222643,11.9153862013826,26.10885863454,24.9662259700716,21.8623775732224,21.8128487379996,16.4099312193905,13.8221177305782,18.5723618959906,20.6511103096065,28.5973295666157,23.155481795771,18.7970328353287,25.0269861378654,25.6933060193944,23.7550964566242,24.128712262524,20.1121777274597,15.7611506708933,15.8909919142003,17.5428837768739,24.4456776128019,32.5877430618115,23.5114071680163,28.5972716508153,9.85874893964361,10.7762618289217,12.714397590007,28.6401185404534,21.9853515538889,19.3153493770506,21.2770521418948,21.3270061934758,25.3300573945566,22.3874814998802,22.9776606916434,23.8197907205467,17.8868663142674,21.7468759580424,50.1686715428929,19.5866675317612,22.6678131926224,21.1951795295012,20.1489324625261,20.2747350588934,21.945803626756,20.4420884205002,21.9156029849736,27.0574215325127,29.0910306320444,17.696622755178,22.2997736819181,18.6933942039986,20.7873316764472,18.976829740753,16.2918710920637,20.6736173174346,21.4149814403137,22.9193841382295,20.194803763575,18.8544966205892,19.296660386471,18.1840380700223,18.3496736425063,25.6205333485189,21.3106515239102,22.1593225825405,23.503846290971,19.7053385912834,21.9588496277883,16.8499494325884,21.8655746660647,19.0597399533438,18.0720589637461,21.6352861158373,16.6139698897425,16.6697586873377,16.4419804744954,19.6402413321322,14.1754725048679,17.5625269257446,17.2194115413998,16.5683299760582,29.7869687566587,21.9463680370567,23.7319711998246,20.664070950805,20.1228636122863,18.3843508450014,17.1129980407244,15.0405591784393,16.3668796891826,17.1834103999382,15.4622372933046,20.5602712110823,20.5074901359042,17.5428917589342,17.1157697487728,18.0991602687568,17.4985332176732,18.9051036054431,23.4888963457885,21.9326391000252,13.3719008430312,14.5530161050657,22.1745656651008,18.7496877455704,14.9633914860376,21.4921104044858,20.8537889074961,18.6779495120868,16.703906003041,19.0788372363631,18.0325227548745,21.4739771578728,25.7815557196904,17.9726735775721,15.8183421004536,16.9871192997803,18.7145286756327,21.0573632967332,22.1894465199858,20.5150019781149,18.5494268496337|short_description=p1@Med8}} | ||
|EntrezGene=80509 | |||
|HGNC= | |||
|UniProt=Q9D7W5,A2A9C8,Q9CY05,Q9DAY7,A2A9C5,A2A9C4 | |||
|association_with_transcript=0bp_to_ENSMUST00000019229,ENSMUST00000073881,ENSMUST00000084319,ENSMUST00000106384,ENSMUST00000126089,ENSMUST00000130421,NM_020000,NM_173719,uc008ujv.1,uc008ujw.1,uc008ujx.1_5end | |||
|description=CAGE_peak_1_at_Med8_5end | |||
|id=chr4:118081936..118081979,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=17.6163731815273,12.9120900826564,13.1949779422965,13.9133537201142,11.0197060588196,13.0945832091274,18.9226238882376,19.2393751927949,13.51571732656,18.4910975794375,45.2015436115333,41.6410669955656,26.8785145991993,20.4563741660454,16.9885978525988,24.2970320867791,37.7763414189199,20.6627718309646,15.9052742982657,19.9463136345074,18.9646537036886,18.5674078745655,18.0227854505865,22.8789164594572,23.3997466688513,18.3754228516806,14.6459078694085,17.0222273821852,26.2232318849796,17.8941392129551,16.4080577884925,12.065582795733,22.7573971406291,0,18.7753552838328,19.1169842162266,15.7210404322024,27.204555997899,41.4107732597614,35.0760908462445,24.1174910092716,17.7591826089196,31.0726625939938,6.79842817068117,7.50189291024408,15.6014739337429,8.60630478782843,18.7501634487184,17.1355222532888,14.7766723296455,18.3382212329225,14.3752564364972,13.5903910906766,11.6057942721815,12.4354705682712,17.7509010864803,11.4613375975503,14.9544906760458,22.659443616275,16.9277113367051,19.6487735086916,23.041428180701,20.4537803105562,22.0475430733943,14.8329954385046,14.209602298922,8.68840320503374,9.22123932771731,22.7080250955566,23.3560273313825,27.7628948983824,17.424710048632,20.5407743085001,26.2130310320002,29.3287141315803,16.5459381589804,4.40463523997555,6.2566795661742,7.21950706304344,18.3321939944969,26.9888548627108,26.045668527838,7.2587579740359,4.50210088025344,6.1119299110724,12.6690291753677,15.9456282494995,16.5895506784518,43.9211921332467,27.2057616384428,11.0148505706638,39.5794983411438,21.759082678648,30.7630819233556,27.2906095328021,17.9210754838934,22.4711072210803,18.5769051610083,22.8611684050525,21.2003744706204,19.4363919291819,5.13305909657271,20.3844191765317,14.2213340630666,17.5357743219083,19.0019899106324,24.2651733607096,20.3247305899927,17.8667139716548,10.5393918736026,24.9818870543236,16.7456013071678,25.8289356926786,25.3214036128406,23.8705075485481,19.8553214300887,26.449861547578,15.0383331196708,16.8076004870476,21.1914573431106,21.6424688091186,26.6681389224372,22.3670113461747,18.737971008739,20.1068838540917,20.6920214718959,13.4192939446631,28.1954283566902,16.9003402007176,11.0845073159569,14.640019290196,24.5025986620086,18.5992022605736,22.2472447877388,13.9217989854905,15.2506787283692,23.3212143217224,18.661045591514,15.9215337813215,25.6739064181498,23.4216797332867,27.5882525320167,25.5688224323596,27.8803912996073,22.9963367131488,21.1387638470002,22.9569225171336,16.815719098036,26.7304311236724,21.1798809787958,20.9381837755099,25.8650964264538,15.0145514581823,19.8503734917635,19.3435208223467,15.723707078661,26.6841011179029,29.3376614110775,23.017243451043,23.1980865239762,19.7001890384121,21.9675714982438,19.8865577891577,22.2343581874566,22.2144642557825,18.1376476905318,16.901224288176,23.1195377886996,21.8864600384929,23.6401148273897,18.1594133382717,15.2047986922346,20.1986106067767,18.6546922076917,17.2437757822584,22.6390147234426,20.1555457620117,23.5361004330554,23.8882840599462,26.0105072483691,22.036335886078,19.1599348392175,18.6797556829691,23.9684288901825,27.5226855695817,23.0578536613615,23.6255096272253,17.9060824837036,21.056121408865,20.6728463990471,23.9913235360911,21.3081162382173,24.8464950248537,19.4222471436539,16.9061603509621,18.7359221617689,18.0375813065892,20.0588444886311,16.8841554121767,17.4179974615931,20.8808308029028,20.1137377192535,31.1275258441506,33.3690211432188,28.107936301188,37.3271106558857,27.3861163874479,26.7706647325183,26.2264627334862,18.9879450717535,22.0503908414048,34.3201766485102,11.5014565221884,14.5134969590716,30.8917296383415,32.5826752551774,37.4940594260796,37.6305946663426,24.2026679118252,22.7389694124582,18.2520773615069,19.5206848641466,19.2446003596572,17.7556632888325,18.091316707337,25.5625078693716,22.2265553189729,19.2674279994434,21.8453033060757,23.2685906896348,25.2120073524208,25.3135852517645,33.1740824666399,38.6173035511284,26.555270743028,22.9027499432928,14.9312048688647,17.1129062424617,21.9672826804745,22.2174415939848,15.1443945319803,11.7131623288992,12.2791336707695,12.1874086955802,15.5959071857676,11.889214293131,18.6212922770451,15.1973046113882,10.6727700045561,18.9579576688866,15.0456490320765,14.4233138970477,18.7320003256613,19.6314446337317,13.2745138339963,23.0641604347232,27.2091201268276,18.6719028958339,19.1946230372502,18.4461088766356,23.0001180919717,18.1766864738753,17.8248689192361,23.3867200872504,24.2462799722497,13.4076206222643,11.9153862013826,26.10885863454,24.9662259700716,21.8623775732224,21.8128487379996,16.4099312193905,13.8221177305782,18.5723618959906,20.6511103096065,28.5973295666157,23.155481795771,18.7970328353287,25.0269861378654,25.6933060193944,23.7550964566242,24.128712262524,20.1121777274597,15.7611506708933,15.8909919142003,17.5428837768739,24.4456776128019,32.5877430618115,23.5114071680163,28.5972716508153,9.85874893964361,10.7762618289217,12.714397590007,28.6401185404534,21.9853515538889,19.3153493770506,21.2770521418948,21.3270061934758,25.3300573945566,22.3874814998802,22.9776606916434,23.8197907205467,17.8868663142674,21.7468759580424,50.1686715428929,19.5866675317612,22.6678131926224,21.1951795295012,20.1489324625261,20.2747350588934,21.945803626756,20.4420884205002,21.9156029849736,27.0574215325127,29.0910306320444,17.696622755178,22.2997736819181,18.6933942039986,20.7873316764472,18.976829740753,16.2918710920637,20.6736173174346,21.4149814403137,22.9193841382295,20.194803763575,18.8544966205892,19.296660386471,18.1840380700223,18.3496736425063,25.6205333485189,21.3106515239102,22.1593225825405,23.503846290971,19.7053385912834,21.9588496277883,16.8499494325884,21.8655746660647,19.0597399533438,18.0720589637461,21.6352861158373,16.6139698897425,16.6697586873377,16.4419804744954,19.6402413321322,14.1754725048679,17.5625269257446,17.2194115413998,16.5683299760582,29.7869687566587,21.9463680370567,23.7319711998246,20.664070950805,20.1228636122863,18.3843508450014,17.1129980407244,15.0405591784393,16.3668796891826,17.1834103999382,15.4622372933046,20.5602712110823,20.5074901359042,17.5428917589342,17.1157697487728,18.0991602687568,17.4985332176732,18.9051036054431,23.4888963457885,21.9326391000252,13.3719008430312,14.5530161050657,22.1745656651008,18.7496877455704,14.9633914860376,21.4921104044858,20.8537889074961,18.6779495120868,16.703906003041,19.0788372363631,18.0325227548745,21.4739771578728,25.7815557196904,17.9726735775721,15.8183421004536,16.9871192997803,18.7145286756327,21.0573632967332,22.1894465199858,20.5150019781149,18.5494268496337 | |||
|short_description=p1@Med8 | |||
}} | |||
Revision as of 03:35, 14 September 2013
| Short description: | p1@Med8 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Med8_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000019229, ENSMUST00000073881, ENSMUST00000084319, ENSMUST00000106384, ENSMUST00000126089, ENSMUST00000130421, NM_020000, NM_173719, uc008ujv.1, uc008ujw.1, uc008ujx.1_5end |
| EntrezGene: | Med8 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
