FFCP PHASE1:Mm9::chr8:35870154..35870176,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3600|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:35870154..35870176,-|id=chr8:35870154..35870176,-|ontology_enrichment_celltype=CL:0000144!8.95e-10!121;CL:0000012!8.95e-10!121;CL:0000548!1.12e-09!115;CL:0000004!1.12e-09!115;CL:0000255!1.12e-09!115;CL:0002371!1.70e-08!118;CL:0000063!2.94e-08!66;CL:0002563!4.51e-07!9;CL:0002251!4.51e-07!9;CL:0000791!7.25e-07!9;CL:0000789!7.25e-07!9;CL:0002420!7.25e-07!9;CL:0002419!7.25e-07!9;CL:0000790!7.25e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,5.53e-13,25;CL:0002076,1.19e-12,15;CL:0002563,7.43e-12,9;CL:0002251,7.43e-12,9;CL:0000791,1.79e-11,9;CL:0000789,1.79e-11,9;CL:0002420,1.79e-11,9;CL:0002419,1.79e-11,9;CL:0000790,1.79e-11,9;CL:0000034,3.68e-11,97;CL:0000542,9.41e-11,13;CL:0000051,9.41e-11,13;CL:0000107,1.80e-10,9;CL:0000624,1.95e-10,8;CL:0000988,3.06e-10,32;CL:0002032,3.06e-10,32;CL:0000037,3.06e-10,32;CL:0000837,3.06e-10,32;CL:0000223,3.14e-10,20;CL:0000838,4.73e-10,12;CL:0000723,7.74e-10,91;CL:0000048,7.74e-10,91;CL:0000075,3.93e-09,7;CL:0000084,6.48e-09,11;CL:0000827,6.48e-09,11;CL:0000239,2.34e-08,6;CL:0000677,2.34e-08,6;CL:0000584,2.34e-08,6;CL:0000893,5.03e-08,6;CL:0002489,5.03e-08,6;CL:0000898,5.03e-08,6;CL:0000809,5.03e-08,6;CL:0000810,5.03e-08,6;CL:0000895,5.03e-08,6;CL:0000808,5.03e-08,6;CL:0000894,5.03e-08,6;CL:0000806,5.03e-08,6;CL:0000807,5.03e-08,6;CL:0000805,5.03e-08,6;CL:0002425,5.03e-08,6;CL:0002436,5.03e-08,6;CL:0002427,5.03e-08,6;CL:0002428,5.03e-08,6;CL:0002429,5.03e-08,6;CL:0002433,5.03e-08,6;CL:0002431,5.03e-08,6;CL:0002432,5.03e-08,6;CL:0002320,7.16e-08,46;CL:0000134,7.16e-08,46;CL:0002321,1.01e-07,70;CL:0000738,1.83e-07,17;CL:0002087,1.83e-07,17;CL:0000219,4.86e-07,54;CL:0002031,7.37e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!1.76e-07!11;UBERON:0003350!4.51e-07!9;UBERON:0004808!4.51e-07!9;UBERON:0001277!4.51e-07!9;UBERON:0000010!7.67e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.43e-12,9;UBERON:0004808,7.43e-12,9;UBERON:0001277,7.43e-12,9;UBERON:0000010,1.99e-11,11;UBERON:0000485,3.30e-11,11;UBERON:0002410,1.80e-10,9;UBERON:0000344,1.00e-08,15;UBERON:0002384,7.16e-08,46;UBERON:0001242,2.10e-07,13;UBERON:0001262,2.10e-07,13;UBERON:0004786,2.10e-07,13|phase1_expression=0.80074423552397,8.72438519098403,6.3699893514535,14.5182821427278,26.5474736871564,3.3575854382378,3.03696432774183,14.332688902015,12.1078301050433,9.12851652655775,5.13653904676515,3.98860794976682,4.45121897821135,2.27293046289393,0.666219523631325,0,0,1.41957974411207,0.822686601634433,1.27316895539409,0.935476191661768,0,0,1.59992422793407,1.60586496747019,8.03924749761028,2.15380998079537,3.44753972297422,0,0.504060259519861,0,3.17515336729816,3.07532393792285,0,14.1537293678125,3.49092755252834,11.637653306955,0,0,0,1.76469446409304,0,0,0.377690453926732,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.878744730937887,0,0,0,7.3824346665404,5.80289713609076,4.03312558970957,1.54355661621568,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,1.26766280701236,1.35537812827653,0.889294796111139,0,0,0,0.299600110518405,0,0.829516898467821,1.62007125998029,0.630974884054146,0,0,0.857435594504678,0.575072826109418,1.83843757322004,0,0.383062014255563,0.153606533256243,0.527545150920775,0.365950574409639,0.52091337055676,0,0,0,0,0.284743361598206,0.931997229126503,1.28734528666413,1.13357340160178,22.3195656300292,1.72084775396277,0.679971333707751,0,0,0,0.140444420131752,0,0.779358013808606,0,2.25349471642689,0,2.54805239706646,0,2.59789249213457,2.53359865475099,2.52762222507392,0.34255163915718,0.517875767294343,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.452167921657868,0.470354828542819,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,0.255457055208591,3.47463861067169,1.79970819298022,2.41433431438823,0.149790639404823,0,0.753926112677186,0.695297280769106,0.767146371990992,0.83115217823824,0.648965052271031,0.305518091550949,0.746441823660558,0.252722758433675,6.10281382070775,0.520481771850815,0.459804208866946,1.44049703844279,0.60281927134286,1.56483948048054,2.0498195245576,1.21812241927647,1.55222022443409,2.58681591519411,1.13463648100692,0.527853372491847,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,1.39323986772945,2.1066395619397,1.28673953557358,0.284163499395593,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,1.02904612379284,0.991256348951394,0,1.70630600428187,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0.796565093017469,3.03468641524931,0.913988100877831,0,0.814605311381257,0.7758099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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3600 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:35870154..35870176,- | |||
|id=chr8:35870154..35870176,- | |||
|ontology_enrichment_celltype=CL:0000144!8.95e-10!121;CL:0000012!8.95e-10!121;CL:0000548!1.12e-09!115;CL:0000004!1.12e-09!115;CL:0000255!1.12e-09!115;CL:0002371!1.70e-08!118;CL:0000063!2.94e-08!66;CL:0002563!4.51e-07!9;CL:0002251!4.51e-07!9;CL:0000791!7.25e-07!9;CL:0000789!7.25e-07!9;CL:0002420!7.25e-07!9;CL:0002419!7.25e-07!9;CL:0000790!7.25e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.53e-13,25;CL:0002076,1.19e-12,15;CL:0002563,7.43e-12,9;CL:0002251,7.43e-12,9;CL:0000791,1.79e-11,9;CL:0000789,1.79e-11,9;CL:0002420,1.79e-11,9;CL:0002419,1.79e-11,9;CL:0000790,1.79e-11,9;CL:0000034,3.68e-11,97;CL:0000542,9.41e-11,13;CL:0000051,9.41e-11,13;CL:0000107,1.80e-10,9;CL:0000624,1.95e-10,8;CL:0000988,3.06e-10,32;CL:0002032,3.06e-10,32;CL:0000037,3.06e-10,32;CL:0000837,3.06e-10,32;CL:0000223,3.14e-10,20;CL:0000838,4.73e-10,12;CL:0000723,7.74e-10,91;CL:0000048,7.74e-10,91;CL:0000075,3.93e-09,7;CL:0000084,6.48e-09,11;CL:0000827,6.48e-09,11;CL:0000239,2.34e-08,6;CL:0000677,2.34e-08,6;CL:0000584,2.34e-08,6;CL:0000893,5.03e-08,6;CL:0002489,5.03e-08,6;CL:0000898,5.03e-08,6;CL:0000809,5.03e-08,6;CL:0000810,5.03e-08,6;CL:0000895,5.03e-08,6;CL:0000808,5.03e-08,6;CL:0000894,5.03e-08,6;CL:0000806,5.03e-08,6;CL:0000807,5.03e-08,6;CL:0000805,5.03e-08,6;CL:0002425,5.03e-08,6;CL:0002436,5.03e-08,6;CL:0002427,5.03e-08,6;CL:0002428,5.03e-08,6;CL:0002429,5.03e-08,6;CL:0002433,5.03e-08,6;CL:0002431,5.03e-08,6;CL:0002432,5.03e-08,6;CL:0002320,7.16e-08,46;CL:0000134,7.16e-08,46;CL:0002321,1.01e-07,70;CL:0000738,1.83e-07,17;CL:0002087,1.83e-07,17;CL:0000219,4.86e-07,54;CL:0002031,7.37e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!1.76e-07!11;UBERON:0003350!4.51e-07!9;UBERON:0004808!4.51e-07!9;UBERON:0001277!4.51e-07!9;UBERON:0000010!7.67e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.43e-12,9;UBERON:0004808,7.43e-12,9;UBERON:0001277,7.43e-12,9;UBERON:0000010,1.99e-11,11;UBERON:0000485,3.30e-11,11;UBERON:0002410,1.80e-10,9;UBERON:0000344,1.00e-08,15;UBERON:0002384,7.16e-08,46;UBERON:0001242,2.10e-07,13;UBERON:0001262,2.10e-07,13;UBERON:0004786,2.10e-07,13 | |||
|phase1_expression=0.80074423552397,8.72438519098403,6.3699893514535,14.5182821427278,26.5474736871564,3.3575854382378,3.03696432774183,14.332688902015,12.1078301050433,9.12851652655775,5.13653904676515,3.98860794976682,4.45121897821135,2.27293046289393,0.666219523631325,0,0,1.41957974411207,0.822686601634433,1.27316895539409,0.935476191661768,0,0,1.59992422793407,1.60586496747019,8.03924749761028,2.15380998079537,3.44753972297422,0,0.504060259519861,0,3.17515336729816,3.07532393792285,0,14.1537293678125,3.49092755252834,11.637653306955,0,0,0,1.76469446409304,0,0,0.377690453926732,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.878744730937887,0,0,0,7.3824346665404,5.80289713609076,4.03312558970957,1.54355661621568,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,1.26766280701236,1.35537812827653,0.889294796111139,0,0,0,0.299600110518405,0,0.829516898467821,1.62007125998029,0.630974884054146,0,0,0.857435594504678,0.575072826109418,1.83843757322004,0,0.383062014255563,0.153606533256243,0.527545150920775,0.365950574409639,0.52091337055676,0,0,0,0,0.284743361598206,0.931997229126503,1.28734528666413,1.13357340160178,22.3195656300292,1.72084775396277,0.679971333707751,0,0,0,0.140444420131752,0,0.779358013808606,0,2.25349471642689,0,2.54805239706646,0,2.59789249213457,2.53359865475099,2.52762222507392,0.34255163915718,0.517875767294343,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.452167921657868,0.470354828542819,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,0.255457055208591,3.47463861067169,1.79970819298022,2.41433431438823,0.149790639404823,0,0.753926112677186,0.695297280769106,0.767146371990992,0.83115217823824,0.648965052271031,0.305518091550949,0.746441823660558,0.252722758433675,6.10281382070775,0.520481771850815,0.459804208866946,1.44049703844279,0.60281927134286,1.56483948048054,2.0498195245576,1.21812241927647,1.55222022443409,2.58681591519411,1.13463648100692,0.527853372491847,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,1.39323986772945,2.1066395619397,1.28673953557358,0.284163499395593,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,1.02904612379284,0.991256348951394,0,1.70630600428187,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0.796565093017469,3.03468641524931,0.913988100877831,0,0.814605311381257,0.775809948670503,0.420814919341911,0.252946148497029,0.295220295959204,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.757965647081939,0.488894929326078,1.18821560042632,0.469380496577004,0,0.476087281772027,0,0.945810864637146,0.44292937929755,0.318909537314974,0.983179888294428,0.345369963731791,0.144649058581512,0,0,0,1.10374698521893,0.481651769963376,0.234423373184406,0,0,3.47059041357882,3.51394869866975,4.30846795465598,4.77937595905104,4.23317480756549,1.98153571552183,4.45291771842384,3.21481443702443,3.95287777946523,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,1.03371317267288,0.727067458955011,0.356497378384721,0,0,0,0,1.08036656418786,0.905510786479282,1.50035924522115,0.709360934569094,0.891844088010353,0.493647061806363,0.913394847343798,0.469343416127421,1.0591603543191,0,0.98931751764888,0.807322133479528,0.663442174209714,0.119372344003136,0.328281799490123,0.291480836629851,0,0.170870880797853,0,0.185194527369712,0,0.27338845544205,0,6.62915876976036,6.57771825921193,5.66619892598138,0,0.949007980743406,0,0.540026704109006,0.627264888043406,0.218362563746178,0.134864346384821,0.247960367176008,0.523511883968059,0.129614973291793,0,0.56369293868419,0.747582730219894,0.330916980914195,0.777804753376191,0.258319646955462,0.506868376472335,0.234714477291508,0.39061315453185,0.104859344425711,0,1.44015003128933,0.316011120628178,0.202725215290164,0.308132871494482,0.389762468933385,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.807731599585181,0.381034033274999,0.403304740547362,0.779663045918019,0.481059208201647,0.467507608726276,0,0.665957860122194,0.448569283047378,0.167884616364078,0.965947970160952,0.375364950902364,0.549454872801795,2.14368379079066,0,0,0,0.572895513439397,0,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,1.24544817101012,0.399024873401031,0.853668028770671,0.729320151204882,0.838452650511929,1.10306105070008,0.44449345560323,0,0.962757628775446,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.512201219238954,0.804096565378586,0,0.463537303779422,0.38581844092741,0.412085900803307,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0.470546902076653,0.169229215783353,0,0.526139422875686,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| |||
|short_description=p@chr8:35870154..35870176,- | |||
}} |
Revision as of 15:33, 14 September 2013
Short description: | p@chr8:35870154..35870176, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:35870154..35870176, - |
Coexpression cluster: | MCL_coexpression_mm9:3600 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.43e-12 | 9 |
gastrointestinal system epithelium | 7.43e-12 | 9 |
intestinal epithelium | 7.43e-12 | 9 |
peripheral nervous system | 1.99e-11 | 11 |
simple columnar epithelium | 3.30e-11 | 11 |
autonomic nervous system | 1.80e-10 | 9 |
mucosa | 1.00e-08 | 15 |
connective tissue | 7.16e-08 | 46 |
intestinal mucosa | 2.10e-07 | 13 |
wall of intestine | 2.10e-07 | 13 |
gastrointestinal system mucosa | 2.10e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.