FFCP PHASE1:Mm9::chr13:108680253..108680267,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67263|HGNC=|UniProt=Q80TB7,E9PX41,F7B372|association_with_transcript=0bp_to_ENSMUST00000052377,ENSMUST00000105097,ENSMUST00000109285,NM_145456,uc007rup.2,uc007ruq.2_5end|description=CAGE_peak_1_at_Zswim6_5end|id=chr13:108680253..108680267,-|ontology_enrichment_celltype=CL:0000393!1.68e-07!39;CL:0000211!1.68e-07!39;CL:0000540!5.21e-07!33;CL:0000047!5.21e-07!33;CL:0000031!5.21e-07!33;CL:0000404!5.21e-07!33;CL:0000107!6.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000393,1.68e-07,39;CL:0000211,1.68e-07,39;CL:0000540,5.21e-07,33;CL:0000047,5.21e-07,33;CL:0000031,5.21e-07,33;CL:0000404,5.21e-07,33;CL:0000107,6.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!3.82e-07!11;UBERON:0002410!6.03e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.82e-07,11;UBERON:0002410,6.03e-07,9|phase1_expression=28.3463459375485,31.4077866875425,31.394947517878,39.6228116811947,49.5886772646884,33.575854382378,18.221785966451,42.6106967357202,128.258525880168,137.39587695101,20.5461561870606,15.6353431630859,32.6993394168603,38.9020790764538,6.99530499812892,7.69406016081339,2.09868563438444,16.7194947639866,18.921791837592,21.6438722416995,22.4514285998824,4.26951090163807,6.52999472847338,7.67963629408352,8.02932483735095,16.6527269593356,14.2151458732495,20.0388246397877,5.70070258369122,8.06496415231778,6.20845429834853,0.635030673459631,0,0,12.7094712690561,7.48055904113216,17.7627339948261,59.012959933904,42.973443948809,25.6526634547161,79.4112508841869,62.1571391312186,40.7828696546169,18.2550386064587,18.3492245507321,15.2343804294196,10.9534788208725,4.14247797122848,5.27246838562732,3.4997381833371,4.05960622713551,8.62515386189829,36.0732603024133,46.423177088726,55.4554768585066,18.2654199585522,10.601737277734,23.7209162447623,20.636279007679,21.1596391708813,20.2826049121977,3.38844532069132,4.4464739805557,11.6986963246582,10.8775299882367,12.0781619540837,6.5912024314049,6.14749288514487,23.7449212186414,22.1409738863973,19.9808713283813,13.139945282575,11.2642955885323,33.3174973864675,32.3957692041639,24.8189072384706,15.4162233399144,8.93811366596314,7.37311359629969,25.5859398196576,20.8591827413494,18.7528813400434,8.09630697104005,9.00420176050688,9.32069311438542,20.3293723976831,14.9490264839058,19.9447407033072,17.8713816266314,22.0668955511814,83.7708372347849,26.673140186423,10.1995700056163,0.539703191637817,3.24888208723835,0.896053774194671,6.03911006566533,9.20323741921512,4.93593408745451,4.59341446863442,39.4361575374705,32.0816193535795,30.5766287647975,56.8853362522665,7.79367747640371,11.1478340809043,16.1767822404731,9.81981365583916,4.14300613835475,12.9144660986398,8.84775166507293,7.61163695780353,9.91646638201052,10.7013074792362,9.7598626922635,8.04266184509923,9.14621380617183,4.62717942143717,7.07688441559899,11.8089800461609,11.9254419968613,17.9403843660032,29.8226817948995,8.49064311333487,11.7290155815535,11.4955674843866,18.6911594229236,10.7982491578813,14.7401463404755,11.3840885947665,36.6000482254901,43.8533688873897,14.9488915365358,20.2015211290961,13.0906468072523,26.9320496692478,8.35082783572594,14.9288364732112,5.55990068554084,12.2056276414155,17.9566211288531,19.5416788768452,20.8872070574205,20.7972648613287,23.5406287063594,22.163673609279,23.8939397627309,14.7460921321239,9.26942369611222,11.7245769704048,10.7330185740009,8.11024209982027,9.17555922444473,10.7958171621872,10.7006710932131,9.15557627365069,4.21327912387941,7.46308930632674,12.7873574728017,9.94203708170409,10.3191466391682,7.74266864282364,8.04932100989715,7.47704080640135,7.55908853148153,5.11574678450897,6.43856163359086,7.58974725386602,7.07607354627966,8.86504306027114,9.8903947645944,11.8421989814519,10.9775057645525,10.8707199195901,19.5569652164638,43.6315556488166,10.9038198384653,5.28901133327089,13.4371597837197,15.7920936865098,12.6290112095651,13.3111126251406,7.78323153457046,10.8428606884159,12.3377556001573,8.07024878147653,12.5667604400135,10.1467800740987,10.5280607044325,10.7858329038507,14.6973873914792,14.9355954940775,13.0870851657626,21.0217263201901,25.9227792048085,24.641810669283,19.5892012039302,23.9864504024889,23.7769379587207,13.8753539100826,13.0308944108341,16.4118228015995,8.59712618552732,4.50481785433454,5.89676985339609,6.2961391467759,5.88294352026658,6.27060615356284,9.93040821947537,10.64475708568,8.59316701907687,9.06052663520669,11.5014565221884,19.3513292787622,14.3537329632698,11.36604950762,7.17589654087649,8.68398338454061,20.5076041084931,14.5908387063273,11.8964432802679,15.2770577197669,12.9079636558676,25.2934448737142,26.8989314201196,37.0753930929818,27.270879930371,32.1123799990724,36.8340515598795,28.6760800752541,24.1758974612254,26.7600758375796,24.1266054302836,22.3001330365671,4.91764273019036,4.69092468718045,13.0045977890111,18.6366581681603,2.78689407140348,6.31177318010932,37.5454781105345,38.2629969410706,47.6085708989486,53.5290107413717,47.0105202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| ||
|EntrezGene=67263 | |||
|HGNC= | |||
|UniProt=Q80TB7,E9PX41,F7B372 | |||
|association_with_transcript=0bp_to_ENSMUST00000052377,ENSMUST00000105097,ENSMUST00000109285,NM_145456,uc007rup.2,uc007ruq.2_5end | |||
|description=CAGE_peak_1_at_Zswim6_5end | |||
|id=chr13:108680253..108680267,- | |||
|ontology_enrichment_celltype=CL:0000393!1.68e-07!39;CL:0000211!1.68e-07!39;CL:0000540!5.21e-07!33;CL:0000047!5.21e-07!33;CL:0000031!5.21e-07!33;CL:0000404!5.21e-07!33;CL:0000107!6.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.68e-07,39;CL:0000211,1.68e-07,39;CL:0000540,5.21e-07,33;CL:0000047,5.21e-07,33;CL:0000031,5.21e-07,33;CL:0000404,5.21e-07,33;CL:0000107,6.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.82e-07!11;UBERON:0002410!6.03e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.82e-07,11;UBERON:0002410,6.03e-07,9 | |||
|phase1_expression=28.3463459375485,31.4077866875425,31.394947517878,39.6228116811947,49.5886772646884,33.575854382378,18.221785966451,42.6106967357202,128.258525880168,137.39587695101,20.5461561870606,15.6353431630859,32.6993394168603,38.9020790764538,6.99530499812892,7.69406016081339,2.09868563438444,16.7194947639866,18.921791837592,21.6438722416995,22.4514285998824,4.26951090163807,6.52999472847338,7.67963629408352,8.02932483735095,16.6527269593356,14.2151458732495,20.0388246397877,5.70070258369122,8.06496415231778,6.20845429834853,0.635030673459631,0,0,12.7094712690561,7.48055904113216,17.7627339948261,59.012959933904,42.973443948809,25.6526634547161,79.4112508841869,62.1571391312186,40.7828696546169,18.2550386064587,18.3492245507321,15.2343804294196,10.9534788208725,4.14247797122848,5.27246838562732,3.4997381833371,4.05960622713551,8.62515386189829,36.0732603024133,46.423177088726,55.4554768585066,18.2654199585522,10.601737277734,23.7209162447623,20.636279007679,21.1596391708813,20.2826049121977,3.38844532069132,4.4464739805557,11.6986963246582,10.8775299882367,12.0781619540837,6.5912024314049,6.14749288514487,23.7449212186414,22.1409738863973,19.9808713283813,13.139945282575,11.2642955885323,33.3174973864675,32.3957692041639,24.8189072384706,15.4162233399144,8.93811366596314,7.37311359629969,25.5859398196576,20.8591827413494,18.7528813400434,8.09630697104005,9.00420176050688,9.32069311438542,20.3293723976831,14.9490264839058,19.9447407033072,17.8713816266314,22.0668955511814,83.7708372347849,26.673140186423,10.1995700056163,0.539703191637817,3.24888208723835,0.896053774194671,6.03911006566533,9.20323741921512,4.93593408745451,4.59341446863442,39.4361575374705,32.0816193535795,30.5766287647975,56.8853362522665,7.79367747640371,11.1478340809043,16.1767822404731,9.81981365583916,4.14300613835475,12.9144660986398,8.84775166507293,7.61163695780353,9.91646638201052,10.7013074792362,9.7598626922635,8.04266184509923,9.14621380617183,4.62717942143717,7.07688441559899,11.8089800461609,11.9254419968613,17.9403843660032,29.8226817948995,8.49064311333487,11.7290155815535,11.4955674843866,18.6911594229236,10.7982491578813,14.7401463404755,11.3840885947665,36.6000482254901,43.8533688873897,14.9488915365358,20.2015211290961,13.0906468072523,26.9320496692478,8.35082783572594,14.9288364732112,5.55990068554084,12.2056276414155,17.9566211288531,19.5416788768452,20.8872070574205,20.7972648613287,23.5406287063594,22.163673609279,23.8939397627309,14.7460921321239,9.26942369611222,11.7245769704048,10.7330185740009,8.11024209982027,9.17555922444473,10.7958171621872,10.7006710932131,9.15557627365069,4.21327912387941,7.46308930632674,12.7873574728017,9.94203708170409,10.3191466391682,7.74266864282364,8.04932100989715,7.47704080640135,7.55908853148153,5.11574678450897,6.43856163359086,7.58974725386602,7.07607354627966,8.86504306027114,9.8903947645944,11.8421989814519,10.9775057645525,10.8707199195901,19.5569652164638,43.6315556488166,10.9038198384653,5.28901133327089,13.4371597837197,15.7920936865098,12.6290112095651,13.3111126251406,7.78323153457046,10.8428606884159,12.3377556001573,8.07024878147653,12.5667604400135,10.1467800740987,10.5280607044325,10.7858329038507,14.6973873914792,14.9355954940775,13.0870851657626,21.0217263201901,25.9227792048085,24.641810669283,19.5892012039302,23.9864504024889,23.7769379587207,13.8753539100826,13.0308944108341,16.4118228015995,8.59712618552732,4.50481785433454,5.89676985339609,6.2961391467759,5.88294352026658,6.27060615356284,9.93040821947537,10.64475708568,8.59316701907687,9.06052663520669,11.5014565221884,19.3513292787622,14.3537329632698,11.36604950762,7.17589654087649,8.68398338454061,20.5076041084931,14.5908387063273,11.8964432802679,15.2770577197669,12.9079636558676,25.2934448737142,26.8989314201196,37.0753930929818,27.270879930371,32.1123799990724,36.8340515598795,28.6760800752541,24.1758974612254,26.7600758375796,24.1266054302836,22.3001330365671,4.91764273019036,4.69092468718045,13.0045977890111,18.6366581681603,2.78689407140348,6.31177318010932,37.5454781105345,38.2629969410706,47.6085708989486,53.5290107413717,47.0105202313852,45.0091683954244,60.7216052512342,64.8808004563112,49.0156844653689,38.237236654195,14.0520684356186,5.69809931735217,13.845391545054,16.9919226661712,10.619611067197,7.76898035695941,6.95344181018927,5.65815239267694,5.61073596473468,8.30074899448604,15.5056975900933,13.0872142611902,9.62542921638748,7.9009189483954,8.4334886859999,4.12542172992747,12.9367050186439,19.2665370613502,12.1597162755789,13.9319072770535,12.7684968222437,14.8046118609719,9.54384319492302,9.13394847343798,7.97883807416615,6.35496212591461,8.38007912608855,5.44124634706884,10.172258881842,9.22787751400785,8.95292580023523,11.6540038818993,11.659233465194,17.0591277849669,14.1822831062218,16.5109494370578,18.7046472643409,11.4904758772862,7.38148829693536,11.2101304871196,36.2054055886912,29.9496107972628,33.582593634475,5.72802370809068,10.1227517945963,17.8921131071627,14.040694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| |||
|short_description=p1@Zswim6 | |||
}} |
Revision as of 23:49, 12 September 2013
Short description: | p1@Zswim6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zswim6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000052377, ENSMUST00000105097, ENSMUST00000109285, NM_145456, uc007rup.2, uc007ruq.2_5end |
EntrezGene: | Zswim6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.68e-07 | 39 |
electrically active cell | 1.68e-07 | 39 |
neuron | 5.21e-07 | 33 |
neuronal stem cell | 5.21e-07 | 33 |
neuroblast | 5.21e-07 | 33 |
electrically signaling cell | 5.21e-07 | 33 |
autonomic neuron | 6.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.82e-07 | 11 |
autonomic nervous system | 6.03e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.