FFCP PHASE1:Mm9::chr8:125135518..125135563,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59005|HGNC=|MCL_coexpression_id=247|UniProt=Q9JME7|association_with_transcript=0bp_to_ENSMUST00000015157,NM_021502,uc009ntj.2_5end|description=CAGE_peak_1_at_Trappc2l_5end|id=chr8:125135518..125135563,+|ontology_enrichment_celltype=CL:0002371!1.45e-16!118;CL:0000055!4.29e-15!50;CL:0000548!5.42e-15!115;CL:0000004!5.42e-15!115;CL:0000255!5.42e-15!115;CL:0000144!1.68e-14!121;CL:0000012!1.68e-14!121;CL:0000221!4.19e-13!44;CL:0000133!4.19e-13!44;CL:0002319!6.82e-13!43;CL:0002321!3.29e-12!70;CL:0000220!3.29e-12!70;CL:0000393!2.88e-11!39;CL:0000211!2.88e-11!39;CL:0000723!1.88e-10!91;CL:0000048!1.88e-10!91;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000540!3.11e-09!33;CL:0000047!3.11e-09!33;CL:0000031!3.11e-09!33;CL:0000404!3.11e-09!33;CL:0000034!4.64e-09!97|ontology_enrichment_celltype_v019_2=CL:0000221,4.19e-13,44;CL:0000133,4.19e-13,44;CL:0002319,6.82e-13,43;CL:0002321,3.29e-12,70;CL:0000393,2.88e-11,39;CL:0000211,2.88e-11,39;CL:0000723,1.88e-10,91;CL:0000048,1.88e-10,91;CL:0000117,1.67e-09,23;CL:0000337,1.67e-09,23;CL:0000540,3.11e-09,33;CL:0000047,3.11e-09,33;CL:0000031,3.11e-09,33;CL:0000404,3.11e-09,33;CL:0000034,4.64e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.92e-20!75;UBERON:0001016!2.92e-20!75;UBERON:0001017!1.16e-19!73;UBERON:0005743!1.16e-19!73;UBERON:0001049!6.42e-15!52;UBERON:0005068!6.42e-15!52;UBERON:0006241!6.42e-15!52;UBERON:0007135!6.42e-15!52;UBERON:0002616!4.19e-14!49;UBERON:0000955!4.62e-14!50;UBERON:0006238!4.62e-14!50;UBERON:0002020!3.68e-12!34;UBERON:0003080!2.39e-11!40;UBERON:0004121!3.64e-11!102;UBERON:0000924!3.64e-11!102;UBERON:0006601!3.64e-11!102;UBERON:0002780!4.80e-11!39;UBERON:0001890!4.80e-11!39;UBERON:0006240!4.80e-11!39;UBERON:0002791!2.48e-10!29;UBERON:0003528!2.48e-10!29;UBERON:0001893!2.48e-10!29;UBERON:0000033!6.00e-10!63;UBERON:0002346!9.88e-10!71;UBERON:0003075!9.88e-10!71;UBERON:0007284!9.88e-10!71;UBERON:0003056!2.54e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.92e-20,75;UBERON:0001017,1.16e-19,73;UBERON:0000073,4.75e-16,54;UBERON:0001049,6.42e-15,52;UBERON:0005068,6.42e-15,52;UBERON:0006241,6.42e-15,52;UBERON:0007135,6.42e-15,52;UBERON:0002616,7.17e-13,46;UBERON:0000955,7.87e-13,47;UBERON:0006238,7.87e-13,47;UBERON:0004121,3.00e-12,95;UBERON:0000924,3.00e-12,95;UBERON:0006601,3.00e-12,95;UBERON:0002020,3.68e-12,34;UBERON:0003080,2.39e-11,40;UBERON:0002346,4.17e-11,64;UBERON:0003075,4.17e-11,64;UBERON:0007284,4.17e-11,64;UBERON:0002780,4.80e-11,39;UBERON:0001890,4.80e-11,39;UBERON:0006240,4.80e-11,39;UBERON:0003528,2.48e-10,29;UBERON:0002791,2.48e-10,29;UBERON:0001893,2.48e-10,29;UBERON:0010314,4.17e-10,92;UBERON:0010371,2.35e-08,73;UBERON:0003056,2.54e-07,49|phase1_expression=47.8845052843334,83.7540978334467,74.1648760204944,57.1657359369909,44.5797199652249,44.6558863285627,48.1242039626783,46.2261497920843,8.16574588479667,16.3845168425395,13.0125655851384,16.2735204350486,33.2129416066539,46.8573356965826,21.9852442798337,25.1069331563384,19.5877325875881,39.2750395871006,38.2549269760011,47.9560306531774,58.2546537534828,34.652541969109,46.7547622558694,95.0354991392836,95.8930794860771,112.549464966544,102.52135508586,80.3707697918366,90.451147661234,74.3488882791796,90.6877788580196,34.9266870402797,36.2888224674896,63.3926724061755,30.3294200738838,25.4339007398493,27.3586937391575,66.5465292871683,100.79225944357,91.6166551954147,85.8817972525281,84.0145946498888,90.7904360168257,63.8296867136177,68.9363132292699,44.968954279612,107.187614175681,60.8290186301446,60.1940140692453,70.1891935658163,54.454718012266,48.8758718840903,44.1268253931847,29.7398478224651,27.8957853288245,58.6551514161959,58.7393551874451,58.7866185196284,77.8918374309451,74.0587370980846,95.7085419294331,77.2565533117621,80.9258264461137,120.136612257067,140.41902348451,127.175940575352,74.001227298046,58.4011824088763,35.0470889602654,47.6570962310868,41.6443423475736,90.8370130404095,81.0587545292422,53.0385160600751,48.9770356903188,44.122501757281,72.6764814595965,73.9309687513237,49.7685167750229,71.7461405252255,76.0262318336024,75.0115253601734,83.7548997004143,117.617385496621,88.3173872149962,42.7211448936818,49.9724599604851,60.3934204473974,59.3693355732163,43.680361741722,32.7546872232896,41.3003460951065,32.638624017972,29.6836755400799,24.6915038630114,23.2973981290615,48.3128805253226,59.3097522571641,73.5194393026119,56.5343319216544,48.4501364031781,38.4979432242953,15.2883143823987,0,44.8136454893213,41.5510179379162,40.4419556011827,45.5593680079049,21.2329064590681,34.4385762630393,25.502343034622,28.010824004717,31.1330921295679,35.2690978893137,31.6313622195046,31.1653146497595,34.360100515078,33.8362495192593,22.9998743506967,30.7357014900077,26.7218237337076,29.5773904412485,37.2783522436244,36.3048188294318,41.4704479490641,41.894957054209,25.8800668932788,44.9927048245056,34.9443124450928,53.9246301857362,60.8475801748773,46.2408015775341,53.364066299028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| ||
|EntrezGene=59005 | |||
|HGNC= | |||
|MCL_coexpression_id=247 | |||
|UniProt=Q9JME7 | |||
|association_with_transcript=0bp_to_ENSMUST00000015157,NM_021502,uc009ntj.2_5end | |||
|description=CAGE_peak_1_at_Trappc2l_5end | |||
|id=chr8:125135518..125135563,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.45e-16!118;CL:0000055!4.29e-15!50;CL:0000548!5.42e-15!115;CL:0000004!5.42e-15!115;CL:0000255!5.42e-15!115;CL:0000144!1.68e-14!121;CL:0000012!1.68e-14!121;CL:0000221!4.19e-13!44;CL:0000133!4.19e-13!44;CL:0002319!6.82e-13!43;CL:0002321!3.29e-12!70;CL:0000220!3.29e-12!70;CL:0000393!2.88e-11!39;CL:0000211!2.88e-11!39;CL:0000723!1.88e-10!91;CL:0000048!1.88e-10!91;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000540!3.11e-09!33;CL:0000047!3.11e-09!33;CL:0000031!3.11e-09!33;CL:0000404!3.11e-09!33;CL:0000034!4.64e-09!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.19e-13,44;CL:0000133,4.19e-13,44;CL:0002319,6.82e-13,43;CL:0002321,3.29e-12,70;CL:0000393,2.88e-11,39;CL:0000211,2.88e-11,39;CL:0000723,1.88e-10,91;CL:0000048,1.88e-10,91;CL:0000117,1.67e-09,23;CL:0000337,1.67e-09,23;CL:0000540,3.11e-09,33;CL:0000047,3.11e-09,33;CL:0000031,3.11e-09,33;CL:0000404,3.11e-09,33;CL:0000034,4.64e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.92e-20!75;UBERON:0001016!2.92e-20!75;UBERON:0001017!1.16e-19!73;UBERON:0005743!1.16e-19!73;UBERON:0001049!6.42e-15!52;UBERON:0005068!6.42e-15!52;UBERON:0006241!6.42e-15!52;UBERON:0007135!6.42e-15!52;UBERON:0002616!4.19e-14!49;UBERON:0000955!4.62e-14!50;UBERON:0006238!4.62e-14!50;UBERON:0002020!3.68e-12!34;UBERON:0003080!2.39e-11!40;UBERON:0004121!3.64e-11!102;UBERON:0000924!3.64e-11!102;UBERON:0006601!3.64e-11!102;UBERON:0002780!4.80e-11!39;UBERON:0001890!4.80e-11!39;UBERON:0006240!4.80e-11!39;UBERON:0002791!2.48e-10!29;UBERON:0003528!2.48e-10!29;UBERON:0001893!2.48e-10!29;UBERON:0000033!6.00e-10!63;UBERON:0002346!9.88e-10!71;UBERON:0003075!9.88e-10!71;UBERON:0007284!9.88e-10!71;UBERON:0003056!2.54e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.92e-20,75;UBERON:0001017,1.16e-19,73;UBERON:0000073,4.75e-16,54;UBERON:0001049,6.42e-15,52;UBERON:0005068,6.42e-15,52;UBERON:0006241,6.42e-15,52;UBERON:0007135,6.42e-15,52;UBERON:0002616,7.17e-13,46;UBERON:0000955,7.87e-13,47;UBERON:0006238,7.87e-13,47;UBERON:0004121,3.00e-12,95;UBERON:0000924,3.00e-12,95;UBERON:0006601,3.00e-12,95;UBERON:0002020,3.68e-12,34;UBERON:0003080,2.39e-11,40;UBERON:0002346,4.17e-11,64;UBERON:0003075,4.17e-11,64;UBERON:0007284,4.17e-11,64;UBERON:0002780,4.80e-11,39;UBERON:0001890,4.80e-11,39;UBERON:0006240,4.80e-11,39;UBERON:0003528,2.48e-10,29;UBERON:0002791,2.48e-10,29;UBERON:0001893,2.48e-10,29;UBERON:0010314,4.17e-10,92;UBERON:0010371,2.35e-08,73;UBERON:0003056,2.54e-07,49 | |||
|phase1_expression=47.8845052843334,83.7540978334467,74.1648760204944,57.1657359369909,44.5797199652249,44.6558863285627,48.1242039626783,46.2261497920843,8.16574588479667,16.3845168425395,13.0125655851384,16.2735204350486,33.2129416066539,46.8573356965826,21.9852442798337,25.1069331563384,19.5877325875881,39.2750395871006,38.2549269760011,47.9560306531774,58.2546537534828,34.652541969109,46.7547622558694,95.0354991392836,95.8930794860771,112.549464966544,102.52135508586,80.3707697918366,90.451147661234,74.3488882791796,90.6877788580196,34.9266870402797,36.2888224674896,63.3926724061755,30.3294200738838,25.4339007398493,27.3586937391575,66.5465292871683,100.79225944357,91.6166551954147,85.8817972525281,84.0145946498888,90.7904360168257,63.8296867136177,68.9363132292699,44.968954279612,107.187614175681,60.8290186301446,60.1940140692453,70.1891935658163,54.454718012266,48.8758718840903,44.1268253931847,29.7398478224651,27.8957853288245,58.6551514161959,58.7393551874451,58.7866185196284,77.8918374309451,74.0587370980846,95.7085419294331,77.2565533117621,80.9258264461137,120.136612257067,140.41902348451,127.175940575352,74.001227298046,58.4011824088763,35.0470889602654,47.6570962310868,41.6443423475736,90.8370130404095,81.0587545292422,53.0385160600751,48.9770356903188,44.122501757281,72.6764814595965,73.9309687513237,49.7685167750229,71.7461405252255,76.0262318336024,75.0115253601734,83.7548997004143,117.617385496621,88.3173872149962,42.7211448936818,49.9724599604851,60.3934204473974,59.3693355732163,43.680361741722,32.7546872232896,41.3003460951065,32.638624017972,29.6836755400799,24.6915038630114,23.2973981290615,48.3128805253226,59.3097522571641,73.5194393026119,56.5343319216544,48.4501364031781,38.4979432242953,15.2883143823987,0,44.8136454893213,41.5510179379162,40.4419556011827,45.5593680079049,21.2329064590681,34.4385762630393,25.502343034622,28.010824004717,31.1330921295679,35.2690978893137,31.6313622195046,31.1653146497595,34.360100515078,33.8362495192593,22.9998743506967,30.7357014900077,26.7218237337076,29.5773904412485,37.2783522436244,36.3048188294318,41.4704479490641,41.894957054209,25.8800668932788,44.9927048245056,34.9443124450928,53.9246301857362,60.8475801748773,46.2408015775341,53.3640662990289,37.5901722275586,56.9339242093195,50.1325502879371,27.5984676034357,30.8529287113031,37.4029682481839,22.7277204357392,22.6409570755104,39.5431619625573,25.9289466919703,31.4973069276644,23.2684827097541,27.4163361409579,27.2672018468811,25.6116337031625,20.47895932862,18.5323958564463,24.105304010461,26.7418793561641,25.3022996795294,21.2433821578522,27.9863705514803,26.0734889532226,42.8350044261073,50.9548856087136,30.1213309359328,26.0978473394732,30.2538617375614,34.2117916775928,28.4093682702252,34.4337405557957,33.1674292707863,35.1126256573116,35.4120889847497,40.9846351708765,31.4309313334748,42.5193731964857,33.8867623901677,38.3043967054371,37.9821699453518,42.8118475845586,50.4695876553905,38.0747065803352,63.1099875499054,38.6097827328775,24.9547253126224,23.4559038579043,19.9744565049245,32.8744145136048,50.2574379089407,68.1007741482962,41.758557415917,78.7261003580772,68.111841584873,67.8441569660324,67.4575741432156,33.2563181202062,48.8471992716809,43.4127975694521,29.3985246477277,24.6776787237014,27.0498565615393,27.6965805869627,30.6444929724849,26.6516115583211,27.0652378891821,34.8359949231861,40.0346755995506,42.9422130447866,32.3133363524992,16.6845105716094,16.3143965943958,14.8408994174003,20.2860121388503,22.1882986972223,28.0088436959562,19.2756412092043,22.698931748505,26.907018492432,8.62609239164127,14.5134969590716,21.2185617717901,27.7836765741823,23.3216637578486,19.2977408545347,30.6690295676564,30.887100118589,20.3706220552532,22.2366062365496,22.5302638356962,25.9634699034814,36.4206770555601,22.4403695036469,23.0147310395039,27.0186921371505,17.8589340896386,30.9701664812745,36.6092161555699,35.4390193524703,101.030160239312,113.132382234292,42.7834917526562,27.3177378841685,52.500042926008,50.0493901748708,29.8361600585549,48.726888950444,44.1711507182759,52.7092304800462,41.3612923646974,38.4739764703609,34.9793918309359,30.2891887944051,35.2185310457158,40.9158201075837,39.1334900167058,37.9159153377732,28.6718972120703,31.6956774527714,26.7134613339865,29.0347416431662,17.2568679841952,27.9197731578229,29.9300321395104,30.5540229204555,39.8657555389043,33.2029959779442,32.8203932323641,19.2672876623078,22.8158322166222,31.2876390356458,27.4088382294997,26.8152412445286,58.8960517954053,24.8484309763208,42.4296482807435,37.7233181655602,41.3202744386497,51.5485882869984,41.3018041711324,49.0188568074505,37.5474732901937,47.4503838734957,40.577225242113,27.0413454824027,21.9591620306432,15.5004217065361,15.9958940964203,11.1615811826642,41.098797964809,44.1312218785013,23.238439788508,23.3217160798441,22.2233432843654,22.9809517545723,16.6766957819651,18.3022538565218,11.728511669576,18.1936888020755,12.5761976162026,49.6428721367859,21.5108475635172,23.9916971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| |||
|short_description=p1@Trappc2l | |||
}} |
Revision as of 15:01, 14 September 2013
Short description: | p1@Trappc2l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trappc2l_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_ENSMUST00000015157, NM_021502, uc009ntj.2_5end |
EntrezGene: | Trappc2l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.19e-13 | 44 |
neurectodermal cell | 4.19e-13 | 44 |
neural cell | 6.82e-13 | 43 |
embryonic cell | 3.29e-12 | 70 |
electrically responsive cell | 2.88e-11 | 39 |
electrically active cell | 2.88e-11 | 39 |
somatic stem cell | 1.88e-10 | 91 |
multi fate stem cell | 1.88e-10 | 91 |
CNS neuron (sensu Vertebrata) | 1.67e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-09 | 23 |
neuron | 3.11e-09 | 33 |
neuronal stem cell | 3.11e-09 | 33 |
neuroblast | 3.11e-09 | 33 |
electrically signaling cell | 3.11e-09 | 33 |
stem cell | 4.64e-09 | 97 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.92e-20 | 75 |
central nervous system | 1.16e-19 | 73 |
regional part of nervous system | 4.75e-16 | 54 |
neural tube | 6.42e-15 | 52 |
neural rod | 6.42e-15 | 52 |
future spinal cord | 6.42e-15 | 52 |
neural keel | 6.42e-15 | 52 |
regional part of brain | 7.17e-13 | 46 |
brain | 7.87e-13 | 47 |
future brain | 7.87e-13 | 47 |
ectoderm-derived structure | 3.00e-12 | 95 |
ectoderm | 3.00e-12 | 95 |
presumptive ectoderm | 3.00e-12 | 95 |
gray matter | 3.68e-12 | 34 |
anterior neural tube | 2.39e-11 | 40 |
neurectoderm | 4.17e-11 | 64 |
neural plate | 4.17e-11 | 64 |
presumptive neural plate | 4.17e-11 | 64 |
regional part of forebrain | 4.80e-11 | 39 |
forebrain | 4.80e-11 | 39 |
future forebrain | 4.80e-11 | 39 |
brain grey matter | 2.48e-10 | 29 |
regional part of telencephalon | 2.48e-10 | 29 |
telencephalon | 2.48e-10 | 29 |
structure with developmental contribution from neural crest | 4.17e-10 | 92 |
ecto-epithelium | 2.35e-08 | 73 |
pre-chordal neural plate | 2.54e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.