FFCP PHASE1:Mm9::chr5:139473589..139473600,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18590|HGNC=|MCL_coexpression_id=0|UniProt=Q99L56|association_with_transcript=-265bp_to_ENSMUST00000110896_5end|description=CAGE_peak_20_at_Pdgfa_5end|id=chr5:139473589..139473600,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000878,8.63e-07,2;CL:0000129,8.63e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.23e-08,14;UBERON:0003135,2.78e-07,15;UBERON:0003101,7.30e-07,16;UBERON:0000079,7.30e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,1.53687322128622,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0.365950574409639,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0.162241263067758,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0,0,0.146199987425332,0,0.134206418760372,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0,0,0.167506257441816,1.42826184531608,0.195133647857799,0.315270288212382,0,0,0,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,5.6369293868419,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,1.20792060413003,3.74439008135225,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0,0.29551344712669,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p20@Pdgfa}} | ||
|EntrezGene=18590 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q99L56 | |||
|association_with_transcript=-265bp_to_ENSMUST00000110896_5end | |||
|description=CAGE_peak_20_at_Pdgfa_5end | |||
|id=chr5:139473589..139473600,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,8.63e-07,2;CL:0000129,8.63e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.23e-08,14;UBERON:0003135,2.78e-07,15;UBERON:0003101,7.30e-07,16;UBERON:0000079,7.30e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,1.53687322128622,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0.365950574409639,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0.162241263067758,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0,0,0.146199987425332,0,0.134206418760372,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0,0,0.167506257441816,1.42826184531608,0.195133647857799,0.315270288212382,0,0,0,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,5.6369293868419,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,1.20792060413003,3.74439008135225,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0,0.29551344712669,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p20@Pdgfa | |||
}} |
Revision as of 06:50, 14 September 2013
Short description: | p20@Pdgfa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Pdgfa_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -265bp_to_ENSMUST00000110896_5end |
EntrezGene: | Pdgfa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 8.63e-07 | 2 |
microglial cell | 8.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 9.23e-08 | 14 |
male reproductive organ | 2.78e-07 | 15 |
male organism | 7.30e-07 | 16 |
male reproductive system | 7.30e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.