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FFCP PHASE1:Mm9::chr15:97597941..97598007,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=223864|HGNC=|UniProt=Q8VCC8|association_with_transcript=0bp_to_ENSMUST00000126854_5end|description=CAGE_peak_2_at_Rapgef3_5end|id=chr15:97597941..97598007,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!4.15e-10!122;UBERON:0000025!5.89e-09!114;UBERON:0000477!6.57e-08!154;UBERON:0000475!6.83e-08!200;UBERON:0000955!7.01e-08!50;UBERON:0006238!7.01e-08!50;UBERON:0000033!7.25e-08!63;UBERON:0001049!1.25e-07!52;UBERON:0005068!1.25e-07!52;UBERON:0006241!1.25e-07!52;UBERON:0007135!1.25e-07!52;UBERON:0002616!2.08e-07!49;UBERON:0001017!6.41e-07!73;UBERON:0005743!6.41e-07!73;UBERON:0004121!7.64e-07!102;UBERON:0000924!7.64e-07!102;UBERON:0006601!7.64e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.56e-11,122;UBERON:0000073,2.65e-10,54;UBERON:0000025,3.24e-10,114;UBERON:0001049,1.55e-09,52;UBERON:0005068,1.55e-09,52;UBERON:0006241,1.55e-09,52;UBERON:0007135,1.55e-09,52;UBERON:0001017,3.83e-09,73;UBERON:0000955,1.16e-08,47;UBERON:0006238,1.16e-08,47;UBERON:0001016,2.03e-08,75;UBERON:0004121,2.74e-08,95;UBERON:0000924,2.74e-08,95;UBERON:0006601,2.74e-08,95;UBERON:0002616,4.06e-08,46;UBERON:0002346,2.96e-07,64;UBERON:0003075,2.96e-07,64;UBERON:0007284,2.96e-07,64;UBERON:0010314,3.44e-07,92;UBERON:0010371,3.71e-07,73|phase1_expression=5.60520964866779,0,0,0,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,6.37824676133023,0,0,0,0.45881856213434,0,0,0,0.760093677825496,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,27.3196095007003,31.0213409531715,4.9557623083654,0,15.4797861030117,25.7032833799332,28.3867652648454,5.87942970826523,24.4379359420452,0,0,0,2.05807548828758,4.01146815914259,3.6097046459421,1.01158230429799,0.528990979272033,0.633831403506179,1.69422266034566,0.889294796111139,0,0,0.7104801149461,12.2836045312546,14.9845139075406,0,0.135005938331691,0,3.14216082844184,3.09215957332259,0,0.0958454710182364,0,3.30347642998166,8.04430229936683,7.68032666281217,0.395658863190582,0.640413505216868,0,9.21303896704557,5.06486349028512,9.16789486660861,4.41942878210502,2.56269025438385,0.559198337475902,0.151452386666368,0.0755715601067855,10.1452571045587,1.72084775396277,0,0,1.29955283489534,0,1.96622188184453,2.89731548382698,2.59786004602869,1.06001872353102,0.422530259330042,2.56652954828636,2.54805239706646,0,0.216491041011214,0,0,2.96878087269556,1.55362730188303,2.3750742250372,0.346970653532272,1.21786191324856,1.38369298353635,0.904335843315735,1.05829836422134,0.879666139307728,1.97755974187499,4.48258006451726,0,0.970601099684455,0.662524555381181,1.93950101254089,1.86391761218122,7.02673912827713,5.86450779077674,1.02182822083437,0,0,0,14.5296920222678,12.8100168789215,0.251308704225729,11.298580812498,9.71718737855256,13.0906468072523,11.8436122039463,3.05518091550949,2.98576729464223,7.07623723614289,2.73574412652416,0,0.459804208866946,0.540186389416048,1.05493372485001,1.15662048557257,0.640568601424249,1.03071897015702,4.39795730256327,0.215567992932842,0.378212160335639,0.175951124163949,1.53437012699302,0.834141747676794,2.089512999133,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.983821158737019,1.85120535464854,0.697601834251224,0.536546802799238,1.28441876603886,1.15191894939436,2.13417703302824,2.75633952455909,3.80119967305864,2.63460138349261,4.2946054003319,10.3042074796422,1.02904612379284,0.330418782983798,0.528901133327089,0,0,0.38660238396628,1.00841762311671,0.444756087689741,0.951128130562796,0.949058123089023,0.494096864172033,1.25667604400135,1.98956472041151,1.55971269695296,0.898819408654221,0.864552199498777,1.1948476395262,0.758671603812327,0.456994050438915,0,2.24016460629846,2.13347735884388,2.31448205638051,7.27220176928959,9.00421902675573,7.53593893638599,7.40382983530803,0.296452627087149,0,0,0.224862112384854,0,0,0.50925170356284,0.863088412352432,0,0.549122826376163,2.87536413054709,0.372140947668503,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,14.041242452662,0.189491411770485,0.325929952884052,0.678980343100753,1.40814148973101,3.68513766371995,3.80869825417622,3.31727201358258,5.04432461139811,5.09368786192182,3.50800491046472,9.66793556822854,6.90739927463582,9.83613598354279,0,0,1.47529281905711,1.37968373152366,14.6101036888891,13.244920584919,0,2.52470927204373,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,13.4954952897159,2.12910127812403,2.13678724400706,2.44330439030364,4.61916344323099,0,0.485561272309963,0.906970670894253,0.943025398779491,1.18120757152309,0.922305443831782,2.32585463851399,0.727067458955011,1.78248689192361,1.26414703174326,0,3.09406629744561,4.76615448055303,0.36012218806262,0.517434735131018,0,1.41872186913819,1.60531935841864,2.79733335023606,3.65357938937519,0.704015124191131,0.63549621259146,0.661585194164886,1.97863503529776,1.61464426695906,0.904693873922338,1.43246812803764,0.820704498725306,2.04036585640896,18.7279555030615,1.02522528478712,1.65109494370578,0.740778109478847,0.753473828018764,0.683471138605126,0.686334519619568,0,0,0,0,0,0.609958401380546,0.648032044930808,1.46361807210128,0.87345025498471,1.34864346384821,0.991841468704031,2.09404753587224,1.29614973291793,14.9121435140862,0.56369293868419,0.149516546043979,0.330916980914195,0.777804753376191,1.16243841129958,0.844780627453891,1.17357238645754,2.21347454234715,1.78260885523708,1.20792060413003,2.59227005632079,2.8441000856536,0,0.102710957164827,0.129920822977795,0.716106782669926,3.3775830312815,1.9231271923195,1.62458479892035,1.9183625490148,2.89585865288999,2.41982844328417,1.26695244961678,1.53938946624527,1.75315353272353,3.17422537061296,0,0.269141569828427,0.167884616364078,3.67060228661162,3.00291960721891,1.28206136987086,1.07184189539533,1.50471631210609,7.90652579663893,5.06357760157895,5.72895513439397,5.32744865265431,4.7955776383945,6.7985450765073,7.42524750254986,5.85417564191487,6.79713613476307,7.24864436452548,0.103787347584177,0,1.19513524027894,1.45864030240976,0,0.367687016900028,0.888986911206461,0.824140228955577,0.962757628775446,1.51618327058278,1.77435509923168,1.69763707247469,1.21733959710847,0.576226371643824,1.14870937911227,0.952587382566147,1.50649623728312,0.77163688185482,1.64834360321323,1.03039244094078,1.02860775715625,1.06485483695602,0.715308569841963,1.30811774969096,0.752875043322645,0.930760686808441,0.73171189149109,0.526139422875686,1.22223702461276,2.24456908663095,1.06771516311757,0.985044823755635,0.409231043169689,0.77468420592983,2.12197272079256,2.24829520144151,1.63752125911786,0.859484216193193,1.53030665655075,1.10295709559758,1.85494268496337|short_description=p2@Rapgef3}}
|EntrezGene=223864
|HGNC=
|UniProt=Q8VCC8
|association_with_transcript=0bp_to_ENSMUST00000126854_5end
|description=CAGE_peak_2_at_Rapgef3_5end
|id=chr15:97597941..97598007,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!4.15e-10!122;UBERON:0000025!5.89e-09!114;UBERON:0000477!6.57e-08!154;UBERON:0000475!6.83e-08!200;UBERON:0000955!7.01e-08!50;UBERON:0006238!7.01e-08!50;UBERON:0000033!7.25e-08!63;UBERON:0001049!1.25e-07!52;UBERON:0005068!1.25e-07!52;UBERON:0006241!1.25e-07!52;UBERON:0007135!1.25e-07!52;UBERON:0002616!2.08e-07!49;UBERON:0001017!6.41e-07!73;UBERON:0005743!6.41e-07!73;UBERON:0004121!7.64e-07!102;UBERON:0000924!7.64e-07!102;UBERON:0006601!7.64e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.56e-11,122;UBERON:0000073,2.65e-10,54;UBERON:0000025,3.24e-10,114;UBERON:0001049,1.55e-09,52;UBERON:0005068,1.55e-09,52;UBERON:0006241,1.55e-09,52;UBERON:0007135,1.55e-09,52;UBERON:0001017,3.83e-09,73;UBERON:0000955,1.16e-08,47;UBERON:0006238,1.16e-08,47;UBERON:0001016,2.03e-08,75;UBERON:0004121,2.74e-08,95;UBERON:0000924,2.74e-08,95;UBERON:0006601,2.74e-08,95;UBERON:0002616,4.06e-08,46;UBERON:0002346,2.96e-07,64;UBERON:0003075,2.96e-07,64;UBERON:0007284,2.96e-07,64;UBERON:0010314,3.44e-07,92;UBERON:0010371,3.71e-07,73
|phase1_expression=5.60520964866779,0,0,0,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,6.37824676133023,0,0,0,0.45881856213434,0,0,0,0.760093677825496,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,27.3196095007003,31.0213409531715,4.9557623083654,0,15.4797861030117,25.7032833799332,28.3867652648454,5.87942970826523,24.4379359420452,0,0,0,2.05807548828758,4.01146815914259,3.6097046459421,1.01158230429799,0.528990979272033,0.633831403506179,1.69422266034566,0.889294796111139,0,0,0.7104801149461,12.2836045312546,14.9845139075406,0,0.135005938331691,0,3.14216082844184,3.09215957332259,0,0.0958454710182364,0,3.30347642998166,8.04430229936683,7.68032666281217,0.395658863190582,0.640413505216868,0,9.21303896704557,5.06486349028512,9.16789486660861,4.41942878210502,2.56269025438385,0.559198337475902,0.151452386666368,0.0755715601067855,10.1452571045587,1.72084775396277,0,0,1.29955283489534,0,1.96622188184453,2.89731548382698,2.59786004602869,1.06001872353102,0.422530259330042,2.56652954828636,2.54805239706646,0,0.216491041011214,0,0,2.96878087269556,1.55362730188303,2.3750742250372,0.346970653532272,1.21786191324856,1.38369298353635,0.904335843315735,1.05829836422134,0.879666139307728,1.97755974187499,4.48258006451726,0,0.970601099684455,0.662524555381181,1.93950101254089,1.86391761218122,7.02673912827713,5.86450779077674,1.02182822083437,0,0,0,14.5296920222678,12.8100168789215,0.251308704225729,11.298580812498,9.71718737855256,13.0906468072523,11.8436122039463,3.05518091550949,2.98576729464223,7.07623723614289,2.73574412652416,0,0.459804208866946,0.540186389416048,1.05493372485001,1.15662048557257,0.640568601424249,1.03071897015702,4.39795730256327,0.215567992932842,0.378212160335639,0.175951124163949,1.53437012699302,0.834141747676794,2.089512999133,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.983821158737019,1.85120535464854,0.697601834251224,0.536546802799238,1.28441876603886,1.15191894939436,2.13417703302824,2.75633952455909,3.80119967305864,2.63460138349261,4.2946054003319,10.3042074796422,1.02904612379284,0.330418782983798,0.528901133327089,0,0,0.38660238396628,1.00841762311671,0.444756087689741,0.951128130562796,0.949058123089023,0.494096864172033,1.25667604400135,1.98956472041151,1.55971269695296,0.898819408654221,0.864552199498777,1.1948476395262,0.758671603812327,0.456994050438915,0,2.24016460629846,2.13347735884388,2.31448205638051,7.27220176928959,9.00421902675573,7.53593893638599,7.40382983530803,0.296452627087149,0,0,0.224862112384854,0,0,0.50925170356284,0.863088412352432,0,0.549122826376163,2.87536413054709,0.372140947668503,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,14.041242452662,0.189491411770485,0.325929952884052,0.678980343100753,1.40814148973101,3.68513766371995,3.80869825417622,3.31727201358258,5.04432461139811,5.09368786192182,3.50800491046472,9.66793556822854,6.90739927463582,9.83613598354279,0,0,1.47529281905711,1.37968373152366,14.6101036888891,13.244920584919,0,2.52470927204373,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,13.4954952897159,2.12910127812403,2.13678724400706,2.44330439030364,4.61916344323099,0,0.485561272309963,0.906970670894253,0.943025398779491,1.18120757152309,0.922305443831782,2.32585463851399,0.727067458955011,1.78248689192361,1.26414703174326,0,3.09406629744561,4.76615448055303,0.36012218806262,0.517434735131018,0,1.41872186913819,1.60531935841864,2.79733335023606,3.65357938937519,0.704015124191131,0.63549621259146,0.661585194164886,1.97863503529776,1.61464426695906,0.904693873922338,1.43246812803764,0.820704498725306,2.04036585640896,18.7279555030615,1.02522528478712,1.65109494370578,0.740778109478847,0.753473828018764,0.683471138605126,0.686334519619568,0,0,0,0,0,0.609958401380546,0.648032044930808,1.46361807210128,0.87345025498471,1.34864346384821,0.991841468704031,2.09404753587224,1.29614973291793,14.9121435140862,0.56369293868419,0.149516546043979,0.330916980914195,0.777804753376191,1.16243841129958,0.844780627453891,1.17357238645754,2.21347454234715,1.78260885523708,1.20792060413003,2.59227005632079,2.8441000856536,0,0.102710957164827,0.129920822977795,0.716106782669926,3.3775830312815,1.9231271923195,1.62458479892035,1.9183625490148,2.89585865288999,2.41982844328417,1.26695244961678,1.53938946624527,1.75315353272353,3.17422537061296,0,0.269141569828427,0.167884616364078,3.67060228661162,3.00291960721891,1.28206136987086,1.07184189539533,1.50471631210609,7.90652579663893,5.06357760157895,5.72895513439397,5.32744865265431,4.7955776383945,6.7985450765073,7.42524750254986,5.85417564191487,6.79713613476307,7.24864436452548,0.103787347584177,0,1.19513524027894,1.45864030240976,0,0.367687016900028,0.888986911206461,0.824140228955577,0.962757628775446,1.51618327058278,1.77435509923168,1.69763707247469,1.21733959710847,0.576226371643824,1.14870937911227,0.952587382566147,1.50649623728312,0.77163688185482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|short_description=p2@Rapgef3
}}

Revision as of 11:45, 13 September 2013

Short description:p2@Rapgef3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rapgef3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000126854_5end
EntrezGene:Rapgef3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rapgef3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D931.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.70
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.53
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D511.30
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F213.09
diencephalon, neonate N30.CNhs11201.1388-42B211.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D57.27
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H17.40
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B114.04
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A49.67
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C214.61
medulla oblongata, neonate N30.CNhs11200.1396-42A313.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit2.56e-11122
regional part of nervous system2.65e-1054
tube3.24e-10114
neural tube1.55e-0952
neural rod1.55e-0952
future spinal cord1.55e-0952
neural keel1.55e-0952
central nervous system3.83e-0973
brain1.16e-0847
future brain1.16e-0847
nervous system2.03e-0875
ectoderm-derived structure2.74e-0895
ectoderm2.74e-0895
presumptive ectoderm2.74e-0895
regional part of brain4.06e-0846
neurectoderm2.96e-0764
neural plate2.96e-0764
presumptive neural plate2.96e-0764
structure with developmental contribution from neural crest3.44e-0792
ecto-epithelium3.71e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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