FFCP PHASE1:Mm9::chr18:36886431..36886436,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12475|HGNC=|MCL_coexpression_id=3137|UniProt=P10810|association_with_transcript=-41bp_to_ENSMUST00000061829_5end|description=CAGE_peak_6_at_Cd14_5end|id=chr18:36886431..36886436,-|ontology_enrichment_celltype=CL:0002076!3.80e-09!15;CL:0000068!1.61e-07!3;CL:0002202!1.61e-07!3;CL:0000069!1.61e-07!3;CL:0002632!1.61e-07!3;CL:0002368!1.61e-07!3;CL:0000307!1.61e-07!3;CL:0000377!1.61e-07!3;CL:0002563!7.55e-07!9;CL:0002251!7.55e-07!9|ontology_enrichment_celltype_v019_2=CL:0000068,1.65e-20,3;CL:0002202,1.65e-20,3;CL:0000069,1.65e-20,3;CL:0002632,1.65e-20,3;CL:0002368,1.65e-20,3;CL:0000307,1.65e-20,3;CL:0000377,1.65e-20,3;CL:0000049,2.27e-08,19;CL:0002076,3.03e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.71e-13!15;UBERON:0001242!4.80e-10!13;UBERON:0000060!4.80e-10!13;UBERON:0001262!4.80e-10!13;UBERON:0004786!4.80e-10!13;UBERON:0003126!1.61e-07!3;UBERON:0001005!1.61e-07!3;UBERON:0007196!1.61e-07!3;UBERON:0001558!1.61e-07!3;UBERON:0004923!4.33e-07!24;UBERON:0003350!7.55e-07!9;UBERON:0004808!7.55e-07!9;UBERON:0001277!7.55e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.65e-20,3;UBERON:0001005,1.65e-20,3;UBERON:0007196,1.65e-20,3;UBERON:0001558,1.65e-20,3;UBERON:0001044,2.05e-07,1;UBERON:0001736,2.05e-07,1;UBERON:0003293,2.05e-07,1;UBERON:0003294,2.05e-07,1;UBERON:0001829,2.05e-07,1;UBERON:0010047,2.05e-07,1;UBERON:0000167,2.05e-07,1;UBERON:0006298,2.05e-07,1|phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,1.10865255327652,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,1.25559489221072,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,3.46385665617943,3.29367825117628,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,2.03685711660064,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,1.11961161858926,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0,0,0.777689839750757,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p6@Cd14}} | ||
|EntrezGene=12475 | |||
|HGNC= | |||
|MCL_coexpression_id=3137 | |||
|UniProt=P10810 | |||
|association_with_transcript=-41bp_to_ENSMUST00000061829_5end | |||
|description=CAGE_peak_6_at_Cd14_5end | |||
|id=chr18:36886431..36886436,- | |||
|ontology_enrichment_celltype=CL:0002076!3.80e-09!15;CL:0000068!1.61e-07!3;CL:0002202!1.61e-07!3;CL:0000069!1.61e-07!3;CL:0002632!1.61e-07!3;CL:0002368!1.61e-07!3;CL:0000307!1.61e-07!3;CL:0000377!1.61e-07!3;CL:0002563!7.55e-07!9;CL:0002251!7.55e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.65e-20,3;CL:0002202,1.65e-20,3;CL:0000069,1.65e-20,3;CL:0002632,1.65e-20,3;CL:0002368,1.65e-20,3;CL:0000307,1.65e-20,3;CL:0000377,1.65e-20,3;CL:0000049,2.27e-08,19;CL:0002076,3.03e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.71e-13!15;UBERON:0001242!4.80e-10!13;UBERON:0000060!4.80e-10!13;UBERON:0001262!4.80e-10!13;UBERON:0004786!4.80e-10!13;UBERON:0003126!1.61e-07!3;UBERON:0001005!1.61e-07!3;UBERON:0007196!1.61e-07!3;UBERON:0001558!1.61e-07!3;UBERON:0004923!4.33e-07!24;UBERON:0003350!7.55e-07!9;UBERON:0004808!7.55e-07!9;UBERON:0001277!7.55e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.65e-20,3;UBERON:0001005,1.65e-20,3;UBERON:0007196,1.65e-20,3;UBERON:0001558,1.65e-20,3;UBERON:0001044,2.05e-07,1;UBERON:0001736,2.05e-07,1;UBERON:0003293,2.05e-07,1;UBERON:0003294,2.05e-07,1;UBERON:0001829,2.05e-07,1;UBERON:0010047,2.05e-07,1;UBERON:0000167,2.05e-07,1;UBERON:0006298,2.05e-07,1 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0,1.10865255327652,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,1.25559489221072,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,3.46385665617943,3.29367825117628,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,2.03685711660064,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,1.11961161858926,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0,0,0.777689839750757,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p6@Cd14 | |||
}} |
Revision as of 16:04, 13 September 2013
Short description: | p6@Cd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:3137 |
Association with transcript: | -41bp_to_ENSMUST00000061829_5end |
EntrezGene: | Cd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.65e-20 | 3 |
epithelial cell of tracheobronchial tree | 1.65e-20 | 3 |
branched duct epithelial cell | 1.65e-20 | 3 |
epithelial cell of lower respiratory tract | 1.65e-20 | 3 |
respiratory epithelial cell | 1.65e-20 | 3 |
tracheal epithelial cell | 1.65e-20 | 3 |
tracheoblast | 1.65e-20 | 3 |
common myeloid progenitor | 2.27e-08 | 19 |
endo-epithelial cell | 3.03e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.65e-20 | 3 |
respiratory airway | 1.65e-20 | 3 |
tracheobronchial tree | 1.65e-20 | 3 |
lower respiratory tract | 1.65e-20 | 3 |
saliva-secreting gland | 2.05e-07 | 1 |
submandibular gland | 2.05e-07 | 1 |
gland of oral region | 2.05e-07 | 1 |
gland of foregut | 2.05e-07 | 1 |
major salivary gland | 2.05e-07 | 1 |
oral gland | 2.05e-07 | 1 |
oral cavity | 2.05e-07 | 1 |
submandibular gland primordium | 2.05e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.