FFCP PHASE1:Mm9::chr10:90039216..90039228,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77531|HGNC=|MCL_coexpression_id=1|UniProt=E9QMD6,E9QLU8,E9Q2H9,E9QPP5,Q8BIZ1|association_with_transcript=-207bp_to_ENSMUST00000078569,ENSMUST00000092221,ENSMUST00000099364,ENSMUST00000099366,NM_001177396,NM_001177398,NM_181398,uc007gsz.2,uc007gta.2,uc007gtb.2,uc007gtc.2_5end|description=CAGE_peak_25_at_Anks1b_5end|id=chr10:90039216..90039228,+|ontology_enrichment_celltype=CL:0000117!3.68e-12!23;CL:0000337!3.68e-12!23;CL:0000540!3.45e-11!33;CL:0000047!3.45e-11!33;CL:0000031!3.45e-11!33;CL:0000404!3.45e-11!33;CL:0000393!8.60e-09!39;CL:0000211!8.60e-09!39;CL:0002319!1.38e-08!43;CL:0000221!2.74e-08!44;CL:0000133!2.74e-08!44;CL:0000055!9.09e-07!50|ontology_enrichment_celltype_v019_2=CL:0002610,5.52e-13,3;CL:0002614,1.09e-12,3;CL:0000117,1.07e-09,23;CL:0000337,1.07e-09,23;CL:0000540,9.08e-07,33;CL:0000047,9.08e-07,33;CL:0000031,9.08e-07,33;CL:0000404,9.08e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.84e-25!73;UBERON:0005743!8.84e-25!73;UBERON:0000073!7.53e-24!75;UBERON:0001016!7.53e-24!75;UBERON:0001049!7.90e-24!52;UBERON:0005068!7.90e-24!52;UBERON:0006241!7.90e-24!52;UBERON:0007135!7.90e-24!52;UBERON:0000955!1.18e-23!50;UBERON:0006238!1.18e-23!50;UBERON:0002616!2.65e-22!49;UBERON:0002020!3.36e-22!34;UBERON:0000033!3.05e-21!63;UBERON:0002346!1.94e-20!71;UBERON:0003075!1.94e-20!71;UBERON:0007284!1.94e-20!71;UBERON:0003080!2.49e-18!40;UBERON:0004121!3.57e-18!102;UBERON:0000924!3.57e-18!102;UBERON:0006601!3.57e-18!102;UBERON:0002791!1.02e-17!29;UBERON:0003528!1.02e-17!29;UBERON:0001893!1.02e-17!29;UBERON:0002780!5.70e-17!39;UBERON:0001890!5.70e-17!39;UBERON:0006240!5.70e-17!39;UBERON:0003056!1.65e-16!49;UBERON:0007811!3.28e-13!86;UBERON:0000153!2.32e-11!94;UBERON:0002298!3.41e-11!6;UBERON:0002420!1.88e-10!8;UBERON:0007245!1.88e-10!8;UBERON:0010009!1.88e-10!8;UBERON:0010011!1.88e-10!8;UBERON:0000454!1.88e-10!8;UBERON:0000956!1.48e-09!21;UBERON:0001869!1.48e-09!21;UBERON:0000203!1.48e-09!21;UBERON:0002619!1.15e-08!17;UBERON:0002950!2.95e-08!4;UBERON:0001891!2.95e-08!4;UBERON:0009616!2.95e-08!4;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002950,2.71e-20,4;UBERON:0001891,2.71e-20,4;UBERON:0009616,2.71e-20,4;UBERON:0010286,2.71e-20,4;UBERON:0004684,5.52e-13,3;UBERON:0002275,5.52e-13,3;UBERON:0000073,8.20e-13,54;UBERON:0002038,1.09e-12,3;UBERON:0009663,1.09e-12,3;UBERON:0009661,1.09e-12,3;UBERON:0000125,1.09e-12,3;UBERON:0002308,1.09e-12,3;UBERON:0003080,1.64e-10,40;UBERON:0002420,2.02e-10,8;UBERON:0007245,2.02e-10,8;UBERON:0010009,2.02e-10,8;UBERON:0010011,2.02e-10,8;UBERON:0000454,2.02e-10,8;UBERON:0002259,5.62e-10,1;UBERON:0002314,5.62e-10,1;UBERON:0004061,5.62e-10,1;UBERON:0006777,5.62e-10,1;UBERON:0005882,5.62e-10,1;UBERON:0001851,1.03e-09,1;UBERON:0005889,1.03e-09,1;UBERON:0001017,2.40e-09,73;UBERON:0002616,4.24e-09,46;UBERON:0001016,4.41e-09,75;UBERON:0000955,6.73e-09,47;UBERON:0006238,6.73e-09,47;UBERON:0003056,1.60e-08,49;UBERON:0002780,5.02e-08,39;UBERON:0001890,5.02e-08,39;UBERON:0006240,5.02e-08,39;UBERON:0001049,5.21e-08,52;UBERON:0005068,5.21e-08,52;UBERON:0006241,5.21e-08,52;UBERON:0007135,5.21e-08,52;UBERON:0004121,4.82e-07,95;UBERON:0000924,4.82e-07,95;UBERON:0006601,4.82e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.285650984403804,0.662605622854841,0,0,0,0,2.29837208553338,1.68967186581868,0.131886287730194,0.823388792421687,1.04182674111352,0.558365998002762,2.25105044012672,1.06958773443767,0.589257170947335,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,1.19832511523858,0,0.376963056338593,0.521472960576829,1.02286182932132,3.32460871295296,1.62241263067758,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0.252470927204373,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.376437521661322,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p25@Anks1b}} | ||
|EntrezGene=77531 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9QMD6,E9QLU8,E9Q2H9,E9QPP5,Q8BIZ1 | |||
|association_with_transcript=-207bp_to_ENSMUST00000078569,ENSMUST00000092221,ENSMUST00000099364,ENSMUST00000099366,NM_001177396,NM_001177398,NM_181398,uc007gsz.2,uc007gta.2,uc007gtb.2,uc007gtc.2_5end | |||
|description=CAGE_peak_25_at_Anks1b_5end | |||
|id=chr10:90039216..90039228,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.68e-12!23;CL:0000337!3.68e-12!23;CL:0000540!3.45e-11!33;CL:0000047!3.45e-11!33;CL:0000031!3.45e-11!33;CL:0000404!3.45e-11!33;CL:0000393!8.60e-09!39;CL:0000211!8.60e-09!39;CL:0002319!1.38e-08!43;CL:0000221!2.74e-08!44;CL:0000133!2.74e-08!44;CL:0000055!9.09e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.52e-13,3;CL:0002614,1.09e-12,3;CL:0000117,1.07e-09,23;CL:0000337,1.07e-09,23;CL:0000540,9.08e-07,33;CL:0000047,9.08e-07,33;CL:0000031,9.08e-07,33;CL:0000404,9.08e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.84e-25!73;UBERON:0005743!8.84e-25!73;UBERON:0000073!7.53e-24!75;UBERON:0001016!7.53e-24!75;UBERON:0001049!7.90e-24!52;UBERON:0005068!7.90e-24!52;UBERON:0006241!7.90e-24!52;UBERON:0007135!7.90e-24!52;UBERON:0000955!1.18e-23!50;UBERON:0006238!1.18e-23!50;UBERON:0002616!2.65e-22!49;UBERON:0002020!3.36e-22!34;UBERON:0000033!3.05e-21!63;UBERON:0002346!1.94e-20!71;UBERON:0003075!1.94e-20!71;UBERON:0007284!1.94e-20!71;UBERON:0003080!2.49e-18!40;UBERON:0004121!3.57e-18!102;UBERON:0000924!3.57e-18!102;UBERON:0006601!3.57e-18!102;UBERON:0002791!1.02e-17!29;UBERON:0003528!1.02e-17!29;UBERON:0001893!1.02e-17!29;UBERON:0002780!5.70e-17!39;UBERON:0001890!5.70e-17!39;UBERON:0006240!5.70e-17!39;UBERON:0003056!1.65e-16!49;UBERON:0007811!3.28e-13!86;UBERON:0000153!2.32e-11!94;UBERON:0002298!3.41e-11!6;UBERON:0002420!1.88e-10!8;UBERON:0007245!1.88e-10!8;UBERON:0010009!1.88e-10!8;UBERON:0010011!1.88e-10!8;UBERON:0000454!1.88e-10!8;UBERON:0000956!1.48e-09!21;UBERON:0001869!1.48e-09!21;UBERON:0000203!1.48e-09!21;UBERON:0002619!1.15e-08!17;UBERON:0002950!2.95e-08!4;UBERON:0001891!2.95e-08!4;UBERON:0009616!2.95e-08!4;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,2.71e-20,4;UBERON:0001891,2.71e-20,4;UBERON:0009616,2.71e-20,4;UBERON:0010286,2.71e-20,4;UBERON:0004684,5.52e-13,3;UBERON:0002275,5.52e-13,3;UBERON:0000073,8.20e-13,54;UBERON:0002038,1.09e-12,3;UBERON:0009663,1.09e-12,3;UBERON:0009661,1.09e-12,3;UBERON:0000125,1.09e-12,3;UBERON:0002308,1.09e-12,3;UBERON:0003080,1.64e-10,40;UBERON:0002420,2.02e-10,8;UBERON:0007245,2.02e-10,8;UBERON:0010009,2.02e-10,8;UBERON:0010011,2.02e-10,8;UBERON:0000454,2.02e-10,8;UBERON:0002259,5.62e-10,1;UBERON:0002314,5.62e-10,1;UBERON:0004061,5.62e-10,1;UBERON:0006777,5.62e-10,1;UBERON:0005882,5.62e-10,1;UBERON:0001851,1.03e-09,1;UBERON:0005889,1.03e-09,1;UBERON:0001017,2.40e-09,73;UBERON:0002616,4.24e-09,46;UBERON:0001016,4.41e-09,75;UBERON:0000955,6.73e-09,47;UBERON:0006238,6.73e-09,47;UBERON:0003056,1.60e-08,49;UBERON:0002780,5.02e-08,39;UBERON:0001890,5.02e-08,39;UBERON:0006240,5.02e-08,39;UBERON:0001049,5.21e-08,52;UBERON:0005068,5.21e-08,52;UBERON:0006241,5.21e-08,52;UBERON:0007135,5.21e-08,52;UBERON:0004121,4.82e-07,95;UBERON:0000924,4.82e-07,95;UBERON:0006601,4.82e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.285650984403804,0.662605622854841,0,0,0,0,2.29837208553338,1.68967186581868,0.131886287730194,0.823388792421687,1.04182674111352,0.558365998002762,2.25105044012672,1.06958773443767,0.589257170947335,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,1.19832511523858,0,0.376963056338593,0.521472960576829,1.02286182932132,3.32460871295296,1.62241263067758,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0.252470927204373,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.376437521661322,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p25@Anks1b | |||
}} |
Revision as of 17:56, 12 September 2013
Short description: | p25@Anks1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Anks1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -207bp_to_ENSMUST00000078569, ENSMUST00000092221, ENSMUST00000099364, ENSMUST00000099366, NM_001177396, NM_001177398, NM_181398, uc007gsz.2, uc007gta.2, uc007gtb.2, uc007gtc.2_5end |
EntrezGene: | Anks1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.52e-13 | 3 |
neuron of the substantia nigra | 1.09e-12 | 3 |
CNS neuron (sensu Vertebrata) | 1.07e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-09 | 23 |
neuron | 9.08e-07 | 33 |
neuronal stem cell | 9.08e-07 | 33 |
neuroblast | 9.08e-07 | 33 |
electrically signaling cell | 9.08e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.