FFCP PHASE1:Mm9::chr1:89991578..89991585,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=394432|HGNC=|UniProt=Q6ZQM8,Q8R0P3|association_with_transcript=2bp_to_NM_201642,uc007byc.1_5end|description=CAGE_peak_3_at_Ugt1a7c_5end|id=chr1:89991578..89991585,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,4.12e-12,9;CL:0002092,1.32e-08,3;CL:0002540,1.32e-08,3;CL:0000192,1.40e-08,3;CL:0000359,1.40e-08,3;CL:0002539,1.40e-08,3;CL:0000514,1.40e-08,3;CL:0000680,7.18e-07,6;CL:0000187,7.18e-07,6;CL:0000056,7.18e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.71e-07,3;DOID:4045,3.71e-07,3|ontology_enrichment_uberon=UBERON:0000344!2.80e-08!15;UBERON:0004923!2.34e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.12e-12,9;UBERON:0002036,4.12e-12,9;UBERON:0002385,4.12e-12,9;UBERON:0000486,4.12e-12,9;UBERON:0007503,4.12e-12,9;UBERON:0001015,4.12e-12,9;UBERON:0002329,4.12e-12,9;UBERON:0003082,4.12e-12,9;UBERON:0003059,4.12e-12,9;UBERON:0007282,4.12e-12,9;UBERON:0004290,4.12e-12,9;UBERON:0009618,4.12e-12,9;UBERON:0002204,6.50e-12,32;UBERON:0000383,8.54e-11,10;UBERON:0007524,1.02e-09,11;UBERON:0003077,1.02e-09,11;UBERON:0007285,1.02e-09,11;UBERON:0001135,1.40e-08,3;UBERON:0004237,1.40e-08,3;UBERON:0004695,1.40e-08,3;UBERON:0002111,1.40e-08,3;UBERON:0004178,1.40e-08,3;UBERON:0000344,4.17e-07,15;UBERON:0002371,8.61e-07,16|phase1_expression=0,0.697950815278722,1.81999695755814,3.32710632437513,2.50447864973174,0.33575854382378,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,4.31979541542198,3.44113921600755,0.57423196411502,1.29228598847722,1.29282739611533,1.71021077510736,0.504060259519861,0,0,0,0,0,0.498703936075477,0.408338712524738,1.25559489221072,3.906676722619,1.0470474879476,2.94115744015507,2.04913645487534,1.45653105909346,9.69405498411945,6.9950082541465,2.9367480345869,0,0,0,0,0.279972843250725,0,0,0,0,0,0,1.54701627683233,0,0,0,0,1.77858959222228,4.49949858640699,3.9554654502679,4.9733608046227,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.148442139064825,0,0,0,0,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0,0,3.83185582812887,0.838705871541442,0,2.1601938602421,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,3.51106593656617,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,6.93879444265976,1.58670339998127,0,0,0.257734922644187,0.605050573870028,0.889512175379481,0.380451252225118,0.949058123089023,0,0,0.596869416123452,0,0.898819408654221,2.16138049874694,3.58454291857861,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.590440591918409,0.470996183524124,1.85095745882701,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,10.5553898757491,3.26343410291226,0,0,0,0,1.3114795630134,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0.484393280087717,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.228778173206523,0.679913719975421,1.81936888020755,0.690999869022119,0,0,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,1.8146096260851,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,6.56844619709447,0,1.64836461840539,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0.231867835620421|short_description=p3@Ugt1a7c}} | ||
|EntrezGene=394432 | |||
|HGNC= | |||
|UniProt=Q6ZQM8,Q8R0P3 | |||
|association_with_transcript=2bp_to_NM_201642,uc007byc.1_5end | |||
|description=CAGE_peak_3_at_Ugt1a7c_5end | |||
|id=chr1:89991578..89991585,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.12e-12,9;CL:0002092,1.32e-08,3;CL:0002540,1.32e-08,3;CL:0000192,1.40e-08,3;CL:0000359,1.40e-08,3;CL:0002539,1.40e-08,3;CL:0000514,1.40e-08,3;CL:0000680,7.18e-07,6;CL:0000187,7.18e-07,6;CL:0000056,7.18e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.71e-07,3;DOID:4045,3.71e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.80e-08!15;UBERON:0004923!2.34e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.12e-12,9;UBERON:0002036,4.12e-12,9;UBERON:0002385,4.12e-12,9;UBERON:0000486,4.12e-12,9;UBERON:0007503,4.12e-12,9;UBERON:0001015,4.12e-12,9;UBERON:0002329,4.12e-12,9;UBERON:0003082,4.12e-12,9;UBERON:0003059,4.12e-12,9;UBERON:0007282,4.12e-12,9;UBERON:0004290,4.12e-12,9;UBERON:0009618,4.12e-12,9;UBERON:0002204,6.50e-12,32;UBERON:0000383,8.54e-11,10;UBERON:0007524,1.02e-09,11;UBERON:0003077,1.02e-09,11;UBERON:0007285,1.02e-09,11;UBERON:0001135,1.40e-08,3;UBERON:0004237,1.40e-08,3;UBERON:0004695,1.40e-08,3;UBERON:0002111,1.40e-08,3;UBERON:0004178,1.40e-08,3;UBERON:0000344,4.17e-07,15;UBERON:0002371,8.61e-07,16 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,3.32710632437513,2.50447864973174,0.33575854382378,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,4.31979541542198,3.44113921600755,0.57423196411502,1.29228598847722,1.29282739611533,1.71021077510736,0.504060259519861,0,0,0,0,0,0.498703936075477,0.408338712524738,1.25559489221072,3.906676722619,1.0470474879476,2.94115744015507,2.04913645487534,1.45653105909346,9.69405498411945,6.9950082541465,2.9367480345869,0,0,0,0,0.279972843250725,0,0,0,0,0,0,1.54701627683233,0,0,0,0,1.77858959222228,4.49949858640699,3.9554654502679,4.9733608046227,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.148442139064825,0,0,0,0,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0,0,3.83185582812887,0.838705871541442,0,2.1601938602421,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,3.51106593656617,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,6.93879444265976,1.58670339998127,0,0,0.257734922644187,0.605050573870028,0.889512175379481,0.380451252225118,0.949058123089023,0,0,0.596869416123452,0,0.898819408654221,2.16138049874694,3.58454291857861,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.590440591918409,0.470996183524124,1.85095745882701,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,10.5553898757491,3.26343410291226,0,0,0,0,1.3114795630134,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0.484393280087717,0,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.228778173206523,0.679913719975421,1.81936888020755,0.690999869022119,0,0,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,1.8146096260851,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,6.56844619709447,0,1.64836461840539,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@Ugt1a7c | |||
}} |
Revision as of 21:12, 13 September 2013
Short description: | p3@Ugt1a7c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ugt1a7c_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_NM_201642, uc007byc.1_5end |
EntrezGene: | Ugt1a7c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.12e-12 | 9 |
bone marrow cell | 1.32e-08 | 3 |
mesenchymal stem cell of the bone marrow | 1.32e-08 | 3 |
smooth muscle cell | 1.40e-08 | 3 |
vascular associated smooth muscle cell | 1.40e-08 | 3 |
aortic smooth muscle cell | 1.40e-08 | 3 |
smooth muscle myoblast | 1.40e-08 | 3 |
muscle precursor cell | 7.18e-07 | 6 |
muscle cell | 7.18e-07 | 6 |
myoblast | 7.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.12e-12 | 9 |
striated muscle tissue | 4.12e-12 | 9 |
muscle tissue | 4.12e-12 | 9 |
multilaminar epithelium | 4.12e-12 | 9 |
epithelial vesicle | 4.12e-12 | 9 |
musculature | 4.12e-12 | 9 |
somite | 4.12e-12 | 9 |
myotome | 4.12e-12 | 9 |
presomitic mesoderm | 4.12e-12 | 9 |
presumptive segmental plate | 4.12e-12 | 9 |
dermomyotome | 4.12e-12 | 9 |
trunk paraxial mesoderm | 4.12e-12 | 9 |
musculoskeletal system | 6.50e-12 | 32 |
musculature of body | 8.54e-11 | 10 |
dense mesenchyme tissue | 1.02e-09 | 11 |
paraxial mesoderm | 1.02e-09 | 11 |
presumptive paraxial mesoderm | 1.02e-09 | 11 |
smooth muscle tissue | 1.40e-08 | 3 |
blood vessel smooth muscle | 1.40e-08 | 3 |
arterial system smooth muscle | 1.40e-08 | 3 |
artery smooth muscle tissue | 1.40e-08 | 3 |
aorta smooth muscle tissue | 1.40e-08 | 3 |
mucosa | 4.17e-07 | 15 |
bone marrow | 8.61e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.71e-07 | 3 |
muscle cancer | 3.71e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.